Propagation of Crp regulog to Synechococcus sp. JA-3-3Ab
| Source regulog: | Crp - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechococcus sp. JA-3-3Ab |
| Orthologous TF(s) | CYA_1331 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -32
Score: 3.8 Sequence: ATTGACTAGAGTCATG
Locus tag: CYA_0077
|
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| CYA_0077 | -32 | 3.8 | ATTGACTAGAGTCATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: murF | ||||
| Ortholog function: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2693 | -92 | 4.1 | GGTGACAAATATCACT |
| Synechocystis sp. PCC 6803 | slr1351 | -101 | 5 | GGTGATCTAGATCACA |
| Cyanothece sp. ATCC 51142 | cce_4424 | -83 | 5.1 | TGTGATCTTGATCACA |
| Cyanothece sp. PCC 8801 | PCC8801_2372 | -74 | 4.8 | AGTGATCTGGGTCACA |
| Synechococcus sp. JA-3-3Ab | CYA_0077 | -32 | 3.8 | ATTGACTAGAGTCATG |
| Thermosynechococcus elongatus BP-1 | null | 3 | 4.2 | ATTGATCTAAAACAAC |
|
Position: -135
Score: 3.6 Sequence: GTTGATACTACTCAAA
Locus tag: CYA_0325
|
||||
| CYA_0325 | -135 | 3.6 | GTTGATACTACTCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gap2 | ||||
| Ortholog function: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0106 | -65 | 3.7 | TATGATTGGGGTCATC |
| Cyanothece sp. PCC 8801 | PCC8801_2557 | -31 | 4 | ATTGAGCTAAAGCATA |
| Nostoc sp. PCC 7120 | all5062 | -56 | 3.8 | TATGATTGGGGTCAAA |
| -1 | 4.1 | TGTGATTAGAGTCGCA | ||
| Trichodesmium erythraeum IMS101 | Tery_4030 | -410 | 3.6 | TATGATAATTCTCAAG |
|
Position: 5
Score: 3.7 Sequence: CATGTTTAAGATCACG
Locus tag: CYA_2225
|
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| CYA_2225 | 5 | 3.7 | CATGTTTAAGATCACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcC | ||||
| Ortholog function: Phycobilisome linker polypeptide, allophycocyanin-associated | ||||
| Cyanothece sp. ATCC 51142 | cce_2911 | 5 | 4.1 | AATGTTTAAAGTCACC |
| Cyanothece sp. PCC 8801 | PCC8801_2788 | 5 | 3.9 | GATGTTTAAAGTCACC |
| Microcystis aeruginosa NIES-843 | MAE_10240 | 5 | 4.1 | GATGTTCAAAATCACC |
| Trichodesmium erythraeum IMS101 | Tery_3647 | 5 | 4.2 | AATGTTTAAGATCACA |
| Synechococcus sp. JA-3-3Ab | CYA_2225 | 5 | 3.7 | CATGTTTAAGATCACG |
| Synechococcus sp. WH 8102 | SYNW0483 | 5 | 3.9 | GTTGTTCAAAGTCACC |
| Thermosynechococcus elongatus BP-1 | null | -233 | 3.6 | CATGAAAGAAGTCACC |