Propagation of Fur regulog to Synechococcus sp. JA-3-3Ab
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechococcus sp. JA-3-3Ab |
| Orthologous TF(s) | CYA_0030 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -102
Score: 3.3 Sequence: CTCGCCAAAGATTAAAAAT
Position: -96
Score: 3.9 Sequence: AAAGATTAAAAATATGATT
Position: -72
Score: 3.1 Sequence: TGTAACAATACTTAGCAAA
Position: -1
Score: 4 Sequence: TATGGCAACGATTCGCTTT
Locus tag: CYA_0643
|
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| CYA_0643 | -102 | 3.3 | CTCGCCAAAGATTAAAAAT | |
| -96 | 3.9 | AAAGATTAAAAATATGATT | ||
| -72 | 3.1 | TGTAACAATACTTAGCAAA | ||
| -1 | 4 | TATGGCAACGATTCGCTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fdx | ||||
| Ortholog function: Predicted ferredoxin | ||||
| Nostoc sp. PCC 7120 | asl0884 | -90 | 3.5 | ATTCTTAATTTTTTGTAAT |
| Synechococcus sp. JA-3-3Ab | CYA_0643 | -92 | 2.8 | ATTAAAAATATGATTTAAA |
|
Position: -147
Score: 3.4 Sequence: TTTGCAATTATTGCGAATT
Position: -138
Score: 3.2 Sequence: ATTGCGAATTGTTACGAGA
Locus tag: CYA_1319
|
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| CYA_1319 | -147 | 3.4 | TTTGCAATTATTGCGAATT | |
| -138 | 3.2 | ATTGCGAATTGTTACGAGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -222
Score: 3 Sequence: GTTGCAGAAAAGTTACATT
Locus tag: CYA_1337
|
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| CYA_1337 | -222 | 3 | GTTGCAGAAAAGTTACATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcF | ||||
| Ortholog function: Allophycocyanin, beta subunit | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1631 | -257 | 3.3 | TTTTATTATTTTTTTTAAA |
| Cyanothece sp. ATCC 51142 | cce_1944 | -151 | 4.4 | ATTGCTAAAATCTATAATT |
| Cyanothece sp. PCC 7425 | Cyan7425_1838 | -245 | 3 | TTTTATATTATCTTTTAAC |
| Thermosynechococcus elongatus BP-1 | null | -157 | 3.1 | AATTATGAACTTTTGTAAT |
|
Position: -173
Score: 3.6 Sequence: ATTGAATTAAGTTCGCTAA
Position: -141
Score: 3.2 Sequence: CTTAAGTATCGATCTCGAT
Position: -134
Score: 3.7 Sequence: ATCGATCTCGATTATTTTT
Position: -92
Score: 3.2 Sequence: ATTGACTTGCAATAACTTT
Locus tag: CYA_1515
|
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| CYA_1515 | -173 | 3.6 | ATTGAATTAAGTTCGCTAA | |
| -141 | 3.2 | CTTAAGTATCGATCTCGAT | ||
| -134 | 3.7 | ATCGATCTCGATTATTTTT | ||
| -92 | 3.2 | ATTGACTTGCAATAACTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -249
Score: 3.6 Sequence: AACTATAATAATAATTAAG
Locus tag: CYA_2037
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| CYA_2037 | -249 | 3.6 | AACTATAATAATAATTAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sigC | ||||
| Ortholog function: RNA polymerase sigma-subunit | ||||
| Nostoc sp. PCC 7120 | all1692 | -320 | 3.5 | AATAAACATAATTTTTACT |
|
Position: -174
Score: 4.7 Sequence: CTTGAATAAAAATCTCAAT
Locus tag: CYA_2109
|
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| CYA_2109 | -174 | 4.7 | CTTGAATAAAAATCTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Fe ABC transport system, substrate-binding protein | ||||
| Synechocystis sp. PCC 6803 | slr0513 | -240 | 3.9 | AATAATAATCTCTTGCAAT |
| -187 | 4.1 | ATTGCACTTTATTTGCAAT | ||
|
Position: -313
Score: 3.8 Sequence: AATGAAAGCAATTTACAAG
Position: -59
Score: 2.9 Sequence: AAGGAGCAAAATTTGTAGT
Position: -41
Score: 3.3 Sequence: TTTCATTAATGTCCTCATC
Locus tag: CYA_2358
|
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| CYA_2358 | -313 | 3.8 | AATGAAAGCAATTTACAAG | |
| -59 | 2.9 | AAGGAGCAAAATTTGTAGT | ||
| -41 | 3.3 | TTTCATTAATGTCCTCATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -116
Score: 3 Sequence: AGTGTTGCAATTTATTAAT
Position: -113
Score: 3.5 Sequence: GTTGCAATTTATTAATTTT
Position: -106
Score: 3 Sequence: TTTATTAATTTTTCGTAAG
Locus tag: CYA_2647
|
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| CYA_2647 | -116 | 3 | AGTGTTGCAATTTATTAAT | |
| -113 | 3.5 | GTTGCAATTTATTAATTTT | ||
| -106 | 3 | TTTATTAATTTTTCGTAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -32
Score: 3.7 Sequence: AAAGATAGTGAAAATCTTT
Position: -26
Score: 3.8 Sequence: AGTGAAAATCTTTTGCAAC
Locus tag: CYA_2794
|
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| CYA_2794 | -32 | 3.7 | AAAGATAGTGAAAATCTTT | |
| -26 | 3.8 | AGTGAAAATCTTTTGCAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: afuC | ||||
| Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0871 | -83 | 5.1 | GTTGAGAATAGTTCTTAAT |
| Cyanothece sp. ATCC 51142 | cce_3801 | -163 | 4.2 | ATTGAAAATTAATGCTAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_3510 | -105 | 5.3 | ATTGAGAATAATTTTCAAA |
| -60 | 4 | GTTGAATAATAGTCTTAAT | ||
| Microcystis aeruginosa NIES-843 | MAE_12460 | -117 | 4.4 | TTTGAGAAAGTTTCCTAAT |
| Trichodesmium erythraeum IMS101 | Tery_3222 | -94 | 5.1 | AATGAAAAAAATATTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1406 | -81 | 4.2 | ATTGAGAATAAATCGCAGA |
| Synechococcus sp. JA-3-3Ab | CYA_2794 | -26 | 3.8 | AGTGAAAATCTTTTGCAAC |
| Gloeobacter violaceus PCC 7421 | gll1012 | -64 | 3.7 | ATTGACAATTAATTGCAGC |