Propagation of Fur regulog to Synechococcus sp. JA-3-3Ab

Reference regulog properties
Source regulog:	Fur - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Synechococcus sp. JA-3-3Ab
Orthologous TF(s)	CYA_0030
Regulated genes	9

Built upon 167 sites [see more]

Predicted regulatory interactions in *Synechococcus sp. JA-3-3Ab*
	Locus tag	Position	Score	Sequence
Position: -102 Score: 3.3 Sequence: CTCGCCAAAGATTAAAAAT Position: -96 Score: 3.9 Sequence: AAAGATTAAAAATATGATT Position: -72 Score: 3.1 Sequence: TGTAACAATACTTAGCAAA Position: -1 Score: 4 Sequence: TATGGCAACGATTCGCTTT Locus tag: CYA_0643
	CYA_0643	-102	3.3	CTCGCCAAAGATTAAAAAT
		-96	3.9	AAAGATTAAAAATATGATT
		-72	3.1	TGTAACAATACTTAGCAAA
		-1	4	TATGGCAACGATTCGCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Nostoc sp. PCC 7120	asl0884	-90	3.5	ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab	CYA_0643	-92	2.8	ATTAAAAATATGATTTAAA

Position: -147 Score: 3.4 Sequence: TTTGCAATTATTGCGAATT Position: -138 Score: 3.2 Sequence: ATTGCGAATTGTTACGAGA Locus tag: CYA_1319
	CYA_1319	-147	3.4	TTTGCAATTATTGCGAATT
		-138	3.2	ATTGCGAATTGTTACGAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002	SYNPCC7002_A1018	-57	3.8	ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142	cce_4358	-183	2.7	AATAAATAATTTTTGTAAA
		-138	2.3	ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801	PCC8801_4320	-186	2.3	ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843	MAE_12190	-247	2.8	ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120	all4365	-272	2.9	GTTTTTTATTTTTTTCATC
		-232	3	AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101	Tery_3224	-65	3	GTTTAAAATTTTTTGATAT

Position: -222 Score: 3 Sequence: GTTGCAGAAAAGTTACATT Locus tag: CYA_1337
	CYA_1337	-222	3	GTTGCAGAAAAGTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002	SYNPCC7002_A1631	-257	3.3	TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142	cce_1944	-151	4.4	ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425	Cyan7425_1838	-245	3	TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1	null	-157	3.1	AATTATGAACTTTTGTAAT

Position: -173 Score: 3.6 Sequence: ATTGAATTAAGTTCGCTAA Position: -141 Score: 3.2 Sequence: CTTAAGTATCGATCTCGAT Position: -134 Score: 3.7 Sequence: ATCGATCTCGATTATTTTT Position: -92 Score: 3.2 Sequence: ATTGACTTGCAATAACTTT Locus tag: CYA_1515
	CYA_1515	-173	3.6	ATTGAATTAAGTTCGCTAA
		-141	3.2	CTTAAGTATCGATCTCGAT
		-134	3.7	ATCGATCTCGATTATTTTT
		-92	3.2	ATTGACTTGCAATAACTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801	PCC8801_0256	-185	2.2	TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843	MAE_22920	-282	2.5	TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_1780	-278	3.5	ATTGTTAAAATTATGAAAT
		-167	3.3	ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942	Synpcc7942_2601	-158	4.3	GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313	PMT1340	-30	2.6	ATTTAAATTATTTTATTGT

Position: -249 Score: 3.6 Sequence: AACTATAATAATAATTAAG Locus tag: CYA_2037
	CYA_2037	-249	3.6	AACTATAATAATAATTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120	all1692	-320	3.5	AATAAACATAATTTTTACT

Position: -174 Score: 4.7 Sequence: CTTGAATAAAAATCTCAAT Locus tag: CYA_2109
	CYA_2109	-174	4.7	CTTGAATAAAAATCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803	slr0513	-240	3.9	AATAATAATCTCTTGCAAT
		-187	4.1	ATTGCACTTTATTTGCAAT

Position: -313 Score: 3.8 Sequence: AATGAAAGCAATTTACAAG Position: -59 Score: 2.9 Sequence: AAGGAGCAAAATTTGTAGT Position: -41 Score: 3.3 Sequence: TTTCATTAATGTCCTCATC Locus tag: CYA_2358
	CYA_2358	-313	3.8	AATGAAAGCAATTTACAAG
		-59	2.9	AAGGAGCAAAATTTGTAGT
		-41	3.3	TTTCATTAATGTCCTCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -116 Score: 3 Sequence: AGTGTTGCAATTTATTAAT Position: -113 Score: 3.5 Sequence: GTTGCAATTTATTAATTTT Position: -106 Score: 3 Sequence: TTTATTAATTTTTCGTAAG Locus tag: CYA_2647
	CYA_2647	-116	3	AGTGTTGCAATTTATTAAT
		-113	3.5	GTTGCAATTTATTAATTTT
		-106	3	TTTATTAATTTTTCGTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -32 Score: 3.7 Sequence: AAAGATAGTGAAAATCTTT Position: -26 Score: 3.8 Sequence: AGTGAAAATCTTTTGCAAC Locus tag: CYA_2794
	CYA_2794	-32	3.7	AAAGATAGTGAAAATCTTT
		-26	3.8	AGTGAAAATCTTTTGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0871	-83	5.1	GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142	cce_3801	-163	4.2	ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425	Cyan7425_3510	-105	5.3	ATTGAGAATAATTTTCAAA
		-60	4	GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843	MAE_12460	-117	4.4	TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101	Tery_3222	-94	5.1	AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_1406	-81	4.2	ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab	CYA_2794	-26	3.8	AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421	gll1012	-64	3.7	ATTGACAATTAATTGCAGC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Synechococcus sp. JA-3-3Ab

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --