Propagation of Crp regulog to Synechocystis sp. PCC 6803
| Source regulog: | Crp - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechocystis sp. PCC 6803 |
| Orthologous TF(s) | sll1371, sll1924 |
| Regulated genes | 17 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -106
Score: 4.5 Sequence: TGTGACAATAAACACC
Locus tag: sll1924
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| sll1924 | -106 | 4.5 | TGTGACAATAAACACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: cAMP responsive transcription regulator, Fnr-Crp family | ||||
| Synechocystis sp. PCC 6803 | sll1371 | -159 | 4 | AGTGAAAAAACTCACT |
| Synechocystis sp. PCC 6803 | sll1924 | -106 | 4.5 | TGTGACAATAAACACC |
| Trichodesmium erythraeum IMS101 | Tery_1557 | -259 | 4.2 | CATGATCAAAGTCAAG |
|
Position: 27
Score: 3.2 Sequence: AGAGATTTTTGGCAAA
Locus tag: slr1138
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| slr1138 | 27 | 3.2 | AGAGATTTTTGGCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxC | ||||
| Ortholog function: Cytochrome c oxidase subunit 3 (EC 1.9.3.1) | ||||
| Cyanothece sp. ATCC 51142 | cce_1975 | -78 | 3.7 | TGTGATAAAAAAGCCA |
| Nostoc sp. PCC 7120 | alr2516 | -222 | 3.1 | TCTGGAATAATTCCCC |
|
Position: -162
Score: 5.3 Sequence: TGTGATCTAGATCACA
Locus tag: sll1268
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| sll1268 | -162 | 5.3 | TGTGATCTAGATCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A1600 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1600 | -141 | 4.5 | CGTGATCAGAGTCACG |
| Synechocystis sp. PCC 6803 | slr0442 | -203 | 4.9 | TGTGATCCAGATCACA |
| Synechocystis sp. PCC 6803 | sll1268 | -162 | 5.3 | TGTGATCTAGATCACA |
| Microcystis aeruginosa NIES-843 | MAE_53490 | -130 | 4.8 | TGTGATTTTACTCACA |
|
Position: -77
Score: 4.4 Sequence: CGTGATAGTAATCACC
Locus tag: sll1708
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| sll1708 | -77 | 4.4 | CGTGATAGTAATCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sll1708 | ||||
| Ortholog function: Two component transcriptional regulator, LuxR family | ||||
| Synechocystis sp. PCC 6803 | sll1708 | -77 | 4.4 | CGTGATAGTAATCACC |
| Cyanothece sp. ATCC 51142 | cce_2365 | -1 | 3.8 | GGTGAATTTAAGCATG |
|
Position: -188
Score: 3.8 Sequence: AATGATAAACATCACT
Locus tag: sll1608
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| sll1608 | -188 | 3.8 | AATGATAAACATCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2113 | ||||
| Ortholog function: Transglutaminase-like protein | ||||
| Synechocystis sp. PCC 6803 | sll1608 | -188 | 3.8 | AATGATAAACATCACT |
| Cyanothece sp. PCC 8801 | PCC8801_3693 | -115 | 4.2 | ATTGATATTAATCAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_1077 | -107 | 4.8 | AGTGATCAAAGTCATG |
| Trichodesmium erythraeum IMS101 | Tery_0156 | -50 | 4.7 | AATGATCTTAATCAAA |
|
Position: -1
Score: 3.8 Sequence: TATGACAATTAGCACC
Locus tag: slr1503
|
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| slr1503 | -1 | 3.8 | TATGACAATTAGCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: slr1503 | ||||
| Ortholog function: Predicted aldo/keto reductase | ||||
| Synechocystis sp. PCC 6803 | slr1503 | -1 | 3.8 | TATGACAATTAGCACC |
| Cyanothece sp. ATCC 51142 | cce_2512 | -72 | 4.1 | TGTGAGTTTTGTCACG |
| Cyanothece sp. PCC 8801 | PCC8801_0019 | -35 | 4.6 | TGTGAGCTAAATCACT |
| Trichodesmium erythraeum IMS101 | Tery_2155 | -99 | 3.9 | CATGGTTTTAATCATA |
|
Position: -101
Score: 5 Sequence: GGTGATCTAGATCACA
Locus tag: slr1351
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| slr1351 | -101 | 5 | GGTGATCTAGATCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: murF | ||||
| Ortholog function: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2693 | -92 | 4.1 | GGTGACAAATATCACT |
| Synechocystis sp. PCC 6803 | slr1351 | -101 | 5 | GGTGATCTAGATCACA |
| Cyanothece sp. ATCC 51142 | cce_4424 | -83 | 5.1 | TGTGATCTTGATCACA |
| Cyanothece sp. PCC 8801 | PCC8801_2372 | -74 | 4.8 | AGTGATCTGGGTCACA |
| Synechococcus sp. JA-3-3Ab | CYA_0077 | -32 | 3.8 | ATTGACTAGAGTCATG |
| Thermosynechococcus elongatus BP-1 | null | 3 | 4.2 | ATTGATCTAAAACAAC |
|
Position: -159
Score: 4 Sequence: AGTGAAAAAACTCACT
Locus tag: sll1371
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| sll1371 | -159 | 4 | AGTGAAAAAACTCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: cAMP responsive transcription regulator, Fnr-Crp family | ||||
| Synechocystis sp. PCC 6803 | sll1371 | -159 | 4 | AGTGAAAAAACTCACT |
| Synechocystis sp. PCC 6803 | sll1924 | -106 | 4.5 | TGTGACAATAAACACC |
| Trichodesmium erythraeum IMS101 | Tery_1557 | -259 | 4.2 | CATGATCAAAGTCAAG |
|
Position: -203
Score: 4.9 Sequence: TGTGATCCAGATCACA
Locus tag: slr0442
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| slr0442 | -203 | 4.9 | TGTGATCCAGATCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A1600 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1600 | -141 | 4.5 | CGTGATCAGAGTCACG |
| Synechocystis sp. PCC 6803 | slr0442 | -203 | 4.9 | TGTGATCCAGATCACA |
| Synechocystis sp. PCC 6803 | sll1268 | -162 | 5.3 | TGTGATCTAGATCACA |
| Microcystis aeruginosa NIES-843 | MAE_53490 | -130 | 4.8 | TGTGATTTTACTCACA |
|
Position: -56
Score: 4.1 Sequence: TTTGATCAAAGTCCTA
Locus tag: slr0013
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| slr0013 | -56 | 4.1 | TTTGATCAAAGTCCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0687 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechocystis sp. PCC 6803 | slr0013 | -56 | 4.1 | TTTGATCAAAGTCCTA |
| Cyanothece sp. ATCC 51142 | cce_3288 | -137 | 3.8 | TTTGACTTAAATAACC |
| Cyanothece sp. PCC 8801 | PCC8801_0091 | -153 | 3.8 | TTTGATCTCGATCATT |
| Prochlorococcus marinus str. MIT 9313 | PMT0719 | 17 | 3.7 | TTTGAAACAATTCACC |