Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SufR regulog to Synechocystis sp. PCC 6803

Reference regulog properties
Source regulog: SufR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechocystis sp. PCC 6803
Orthologous TF(s) sll0088
Regulated genes 3
Built upon 48 sites [see more]
Predicted regulatory interactions in Synechocystis sp. PCC 6803
Locus tag Position Score Sequence
Position: -163
Score: 5.6
Sequence: TAAAACAACAGGTAAGTTGTTTTA
Position: -123
Score: 5.6
Sequence: ATTAGCAACCCGATTGTTGTCAAA
Locus tag: sll0088
sll0088 -163 5.6 TAAAACAACAGGTAAGTTGTTTTA
-123 5.6 ATTAGCAACCCGATTGTTGTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis regulator SufR in Cyanobacteria
Synechococcus sp. PCC 7002 SYNPCC7002_A1815 -80 5.5 TTTAACAACTGTTTGGTTGTTTTA
-39 5.8 TTTAACAACAAAAAAGTTGTCAAA
Synechocystis sp. PCC 6803 sll0088 -163 5.6 TAAAACAACAGGTAAGTTGTTTTA
-123 5.6 ATTAGCAACCCGATTGTTGTCAAA
Cyanothece sp. ATCC 51142 cce_0683 -149 5.7 TAAAACAACATTTATGTTTCTTTA
-109 5.7 ATTAACAACTCAATTGTTGTCAAA
Cyanothece sp. PCC 8801 PCC8801_0414 -200 5.7 TTAAACAACATTTTTGTTGCTCAA
-160 5.6 AATAACAACCCCATTGTTGTCAAA
Cyanothece sp. PCC 7425 Cyan7425_3451 -113 5.5 TTAAACAACTCAGGCGTTGCTTAA
-74 5.8 TTTAGCAACACATCAGTTGTCTAA
Microcystis aeruginosa NIES-843 MAE_23100 -182 5.9 TTAAACAACAATAAAGTTGTTTAA
-142 5.7 ATTAACAACAAAGCTGTTGTCAAA
Nostoc sp. PCC 7120 all2491 -101 5.9 TAAAACAACATCGATGTTGTTTAA
-56 5.7 ATTAACAACAACAATGTTGTCAAA
Trichodesmium erythraeum IMS101 Tery_4354 -212 6 TTAAACAACTTATTTGTTGTTTAA
Synechococcus elongatus PCC 7942 Synpcc7942_1733 -136 5.7 TTGAACAACACAGACGTTGCTTAA
-98 5.7 TTGAACAACATCAATGTTGTCAAA
Prochlorococcus marinus str. MIT 9313 PMT1607 -204 5 AAACGAAACCTATTGGTTTCGTTT
Synechococcus sp. JA-3-3Ab CYA_2189 -119 6 TAAAACAACACGGTTGTTGCTTAA
Synechococcus sp. WH 8102 SYNW0317 -68 4.9 TTACGAAACGACCTGGTTTCCTTA
Thermosynechococcus elongatus BP-1 tlr0491 -78 5.7 TTAAGCAACGAGATGGTTGCTTTA
-40 5.9 TTTAGCAACAAAACGGTTGTTTTA
Position: -116
Score: 5.3
Sequence: TAAAACAACTTACCTGTTGTTTTA
Locus tag: slr0074
slr0074 -116 5.3 TAAAACAACTTACCTGTTGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufB
Ortholog function: Iron-sulfur assembly protein
Synechococcus sp. PCC 7002 SYNPCC7002_A1814 -145 5.2 TTTGACAACTTTTTTGTTGTTAAA
-104 5.6 TAAAACAACCAAACAGTTGTTAAA
Synechocystis sp. PCC 6803 slr0074 -116 5.3 TAAAACAACTTACCTGTTGTTTTA
Cyanothece sp. ATCC 51142 cce_0685 -155 4.8 TTTGACAACAATTGAGTTGTTAAT
-115 5.8 TAAAGAAACATAAATGTTGTTTTA
Cyanothece sp. PCC 8801 PCC8801_0415 -188 4.8 TTTGACAACAATGGGGTTGTTATT
-148 5.9 TTGAGCAACAAAAATGTTGTTTAA
Cyanothece sp. PCC 7425 Cyan7425_3450 -106 5 TTAGACAACTGATGTGTTGCTAAA
-67 5.3 TTAAGCAACGCCTGAGTTGTTTAA
Microcystis aeruginosa NIES-843 MAE_23090 -105 5.1 TTTGACAACAGCTTTGTTGTTAAT
-65 5.9 TTAAACAACTTTATTGTTGTTTAA
Nostoc sp. PCC 7120 alr2492 -193 5.2 TTTGACAACATTGTTGTTGTTAAT
-148 6 TTAAACAACATCGATGTTGTTTTA
Trichodesmium erythraeum IMS101 Tery_4355 -62 6 TTAAACAACAAATAAGTTGTTTAA
Synechococcus elongatus PCC 7942 Synpcc7942_1735 -101 5.1 TTTGACAACATTGATGTTGTTCAA
-63 5.1 TTAAGCAACGTCTGTGTTGTTCAA
Prochlorococcus marinus str. MIT 9313 PMT1606 -194 5 AAACGAAACCAATAGGTTTCGTTT
Synechococcus sp. JA-3-3Ab CYA_2190 -67 5.3 TTAAGCAACAACCGTGTTGTTTTA
Synechococcus sp. WH 8102 SYNW0319 -39 4.9 TAAGGAAACCAGGTCGTTTCGTAA
Thermosynechococcus elongatus BP-1 null -116 5.5 TAAAACAACCGTTTTGTTGCTAAA
-78 5.2 TAAAGCAACCATCTCGTTGCTTAA
Position: -172
Score: 4.9
Sequence: AAAAACAATCTTGACGTTGTTTAA
Locus tag: sll0741
sll0741 -172 4.9 AAAAACAATCTTGACGTTGTTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -152 5.1 TTTAGCAAGCATTTTGTTGTTAAA
Synechocystis sp. PCC 6803 sll0741 -172 4.9 AAAAACAATCTTGACGTTGTTTAA
Cyanothece sp. ATCC 51142 cce_0953 -133 5.6 AAAAACAACCCTAATGTTGTGTTA
Cyanothece sp. PCC 8801 PCC8801_3918 -134 5.5 AAAAACAACCATGAAGTTGTCTTA