Propagation of SdaR regulog to Escherichia coli B str. REL606
Source regulog: | SdaR - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | SdaR |
Regulation mode: | activator |
Biological process: | Glucarate utilization; Galactarate utilization |
Effector: | Glycerate |
Phylum: | Proteobacteria/gamma |
Propagated regulon: | |
Target genome | Escherichia coli B str. REL606 |
Orthologous TF(s) | ECB_00161 |
Regulated genes | 3 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -69
Score: 5.3 Sequence: CTTTAGGCATTTGCACAATG
Locus tag: ECB_00161
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ECB_00161 | -69 | 5.3 | CTTTAGGCATTTGCACAATG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: sdaR | ||||
Ortholog function: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family | ||||
Escherichia coli str. K-12 substr. MG1655 | b0162 | -69 | 5.3 | CTTTAGGCATTTGCACAATG |
Salmonella typhimurium LT2 | STM0210 | -71 | 5.8 | TTTTGTGCATTTGCACAATG |
Citrobacter koseri ATCC BAA-895 | CKO_03205 | -17 | 5.1 | GTTTGTGCAGATGCACAATG |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00177 | -17 | 5.4 | CTTAGTGCAAATGCACAATG |
Enterobacter sp. 638 | Ent638_0702 | -71 | 5.3 | CTTTGTGCATTCGCACAATG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3300 | -80 | 4.3 | CTTTGTTAATTTGCACAATG |
Position: -186
Score: 6 Sequence: TTATGTGCATATGCTCAAAA
Locus tag: ECB_02992
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ECB_02992 | -186 | 6 | TTATGTGCATATGCTCAAAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: garP | ||||
Ortholog function: D-galactarate permease, MFS family | ||||
Escherichia coli str. K-12 substr. MG1655 | b3127 | -186 | 6 | TTATGTGCATATGCTCAAAA |
-144 | 4.5 | AAATTAGCATTTGCACAATG | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03539 | -206 | 4.7 | CTTATGGCATAAGCACAATT |
Enterobacter sp. 638 | Ent638_3569 | -208 | 5.4 | GGTTGTGCATATGCTCAAAT |
Position: -250
Score: 4.5 Sequence: CATTGTGCAAATGCTAATTT
Position: -208
Score: 6 Sequence: TTTTGAGCATATGCACATAA
Locus tag: ECB_02993
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ECB_02993 | -250 | 4.5 | CATTGTGCAAATGCTAATTT | |
-208 | 6 | TTTTGAGCATATGCACATAA | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: garD | ||||
Ortholog function: D-galactarate dehydratase (EC 4.2.1.42) | ||||
Escherichia coli str. K-12 substr. MG1655 | b3128 | -250 | 4.5 | CATTGTGCAAATGCTAATTT |
-208 | 6 | TTTTGAGCATATGCACATAA | ||
Salmonella typhimurium LT2 | STM3250 | -276 | 4.8 | CATTGTGCAAACGCTCATTA |
-233 | 5.1 | TTTTGAGCATACGCCCATGA | ||
Citrobacter koseri ATCC BAA-895 | CKO_04527 | -223 | 5.6 | TTTTGAGCATTTGCACAACG |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03540 | -206 | 4.7 | AATTGTGCTTATGCCATAAG |
Enterobacter sp. 638 | Ent638_3570 | -224 | 5.4 | ATTTGAGCATATGCACAACC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3578 | -316 | 4.6 | GTTGGTGCACTTGCCCTATA |
-140 | 4.2 | CTTAGGTCAATTGCATAATG | ||