Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LeuO regulog to Escherichia coli BW2952

Reference regulog properties
Source regulog: LeuO - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process:
Effector: Guanosine 3',5'-bis(diphosphate)
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Escherichia coli BW2952
Orthologous TF(s) BWG_0072
Regulated genes 3
Built upon 21 sites [see more]
Predicted regulatory interactions in Escherichia coli BW2952
Locus tag Position Score Sequence
Position: -325
Score: 4.1
Sequence: ATTAATGTTAAGAAT
Position: -297
Score: 3.5
Sequence: ATATAAATTAATTAT
Position: -243
Score: 4.9
Sequence: ATTCGCGGTAGTTAT
Position: -97
Score: 3.5
Sequence: TTTCTTATTTTATAT
Position: -68
Score: 3.6
Sequence: ATTCTCGAGGATTAT
Locus tag: BWG_0072
BWG_0072 -325 4.1 ATTAATGTTAAGAAT
-297 3.5 ATATAAATTAATTAT
-243 4.9 ATTCGCGGTAGTTAT
-97 3.5 TTTCTTATTTTATAT
-68 3.6 ATTCTCGAGGATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuO
Ortholog function: Dual transcriptional regulator LeuO, LysR family
Citrobacter koseri ATCC BAA-895 CKO_03302 -241 3.5 ATTCGCCACGCTTAT
Edwardsiella tarda EIB202 ETAE_0623 -246 4.7 ATTGCCCTTAATTAT
Enterobacter sp. 638 Ent638_0623 -229 4.6 ATTCATTGGATTTAT
Escherichia coli str. K-12 substr. MG1655 b0076 -325 4.1 ATTAATGTTAAGAAT
-243 4.9 ATTCGCGGTAGTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00081 -291 4.2 ATTTTTATGGATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3672 -223 4.2 ATTGGAATTATATAT
-112 4.7 ATTGATCTCGTTAAT
Proteus mirabilis HI4320 PMI2082 -289 3.8 ATTTTGTTTTATTAT
Salmonella typhimurium LT2 STM0115 -263 3.9 ATTCACTTGGTGTAT
-240 4.4 ATTCGCCATAGTTAT
Serratia proteamaculans 568 Spro_0746 -400 3.6 ATTCTTGATATCAAT
Yersinia pestis KIM y3642 -413 4.2 ATTATTGGTGATTAT
-210 5 ATTGGCGTTATTAAT
Position: -291
Score: 4.4
Sequence: ATTGATTTTAAATAT
Locus tag: BWG_0378
BWG_0378 -291 4.4 ATTGATTTTAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhsD
Ortholog function: component of rhs element
Escherichia coli str. K-12 substr. MG1655 b0497 -323 4.2 ATTGCTGATATTAAT
-291 4.4 ATTGATTTTAAATAT
Position: -298
Score: 4.3
Sequence: ATTCACAGTATGAAT
Position: -268
Score: 4.9
Sequence: ATTCATGGTAATTAT
Locus tag: BWG_2496
BWG_2496 -298 4.3 ATTCACAGTATGAAT
-268 4.9 ATTCATGGTAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: casA
Ortholog function: CRISPR-associated protein CasA
Escherichia coli str. K-12 substr. MG1655 b2760 -298 4.3 ATTCACAGTATGAAT
-268 4.9 ATTCATGGTAATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0746 -242 4.4 ATTATCTTTATTTAT
Salmonella typhimurium LT2 STM2943 -165 4.2 ATTTATAATAATTAT
-152 4 ATTCGTGGGGTAAAT
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