Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AbgR regulog to Escherichia coli BW2952

Reference regulog properties
Source regulog: AbgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: p-aminobenzoyl-glutamate utilization
Effector: p-aminobenzoyl-glutamate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli BW2952
Orthologous TF(s) BWG_1173
Regulated genes 2
Built upon 12 sites [see more]
Predicted regulatory interactions in Escherichia coli BW2952
Locus tag Position Score Sequence
Position: -166
Score: 5.6
Sequence: GATAACCGTTATTTATC
Position: -62
Score: 5.1
Sequence: GATAAGTAAAAACTATC
Locus tag: BWG_1172
BWG_1172 -166 5.6 GATAACCGTTATTTATC
-62 5.1 GATAAGTAAAAACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: abgA
Ortholog function: aminobenzoyl-glutamate utilization protein A
Escherichia coli str. K-12 substr. MG1655 b1338 -166 5.6 GATAACCGTTATTTATC
-62 5.1 GATAAGTAAAAACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01534 -157 5.5 GATAACCGTTGCTTATC
-62 5.3 GATAAACAAAAGCTATC
Serratia proteamaculans 568 Spro_4200 -260 5.6 GATAACCGTTGTTTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3726 -261 5.1 GATAACTTTTAATTATA
Position: -130
Score: 5.1
Sequence: GATAGTTTTTACTTATC
Position: -26
Score: 5.6
Sequence: GATAAATAACGGTTATC
Locus tag: BWG_1173
BWG_1173 -130 5.1 GATAGTTTTTACTTATC
-26 5.6 GATAAATAACGGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: abgR
Ortholog function: transcriptional regulator AbgR
Escherichia coli str. K-12 substr. MG1655 b1339 -130 5.1 GATAGTTTTTACTTATC
-26 5.6 GATAAATAACGGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01535 -121 5.3 GATAGCTTTTGTTTATC
-26 5.5 GATAAGCAACGGTTATC
Serratia proteamaculans 568 Spro_4199 -28 5.6 GATAAACAACGGTTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3727 -30 5.1 TATAATTAAAAGTTATC