Propagation of UxuR regulog to Yersinia pestis Z176003
| Source regulog: | UxuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis Z176003 |
| Orthologous TF(s) | YPZ3_1171 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -105
Score: 4.5 Sequence: TAAGTGGTATAACAAATC
Locus tag: YPZ3_0553
|
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| YPZ3_0553 | -105 | 4.5 | TAAGTGGTATAACAAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuR | ||||
| Ortholog function: exu regulon transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 4.7 | AAAGTGGTATAACAAATA |
| Yersinia pestis KIM | y3602 | -105 | 4.5 | TAAGTGGTATAACAAATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 4.5 | TAAGTGGTATAACAAATC |
| Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 4.2 | AAAGTGGTATAACAACTC |
|
Position: -226
Score: 5.2 Sequence: AACTTGGTTAACCAATAC
Locus tag: YPZ3_0731
|
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| YPZ3_0731 | -226 | 5.2 | AACTTGGTTAACCAATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntP | ||||
| Ortholog function: Fructuronate transporter GntP | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4321 | -177 | 5.4 | AAATTGGTTAACCACATC |
| -71 | 5.6 | ACAATGGTTGACCAATTT | ||
| Yersinia pestis KIM | y3426 | -226 | 5.2 | AACTTGGTTAACCAATAC |
| Edwardsiella tarda EIB202 | ETAE_1036 | -70 | 5.1 | TTATTGGTCAACCAAAAA |
| -29 | 5.8 | AAATTGGTTGACCAAATG | ||
|
Position: -217
Score: 5.2 Sequence: ATTTTGGTGAACCAATAT
Locus tag: YPZ3_0866
|
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| YPZ3_0866 | -217 | 5.2 | ATTTTGGTGAACCAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaT | ||||
| Ortholog function: Putative MFS superfamily hexuronate transporter | ||||
| Yersinia pestis KIM | y3232 | -217 | 5.2 | ATTTTGGTGAACCAATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1967 | -162 | 5.9 | AATTTGGTAAACCAATTT |
|
Position: -194
Score: 5.4 Sequence: ATATTGGTTCACCAAAAT
Locus tag: YPZ3_0867
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| YPZ3_0867 | -194 | 5.4 | ATATTGGTTCACCAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaR | ||||
| Ortholog function: periplasmic binding protein/LacI transcriptional regulator | ||||
| Yersinia pestis KIM | y3231 | -194 | 5.4 | ATATTGGTTCACCAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -176 | 6 | AAATTGGTTTACCAAATT |
|
Position: -91
Score: 4.2 Sequence: AAACTGGTCTAACAACTT
Locus tag: YPZ3_1172
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| YPZ3_1172 | -91 | 4.2 | AAACTGGTCTAACAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeiQ | ||||
| Ortholog function: paralog of D-mannonate oxidoreductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2172 | -176 | 4.1 | AATTTATTATACCAATCT |
| Yersinia pestis KIM | y2903 | -363 | 4.3 | AtgTTGtTatACCgATTT |
| -250 | 3.9 | tAtTgGacTtACCAATTT | ||
| -92 | 4.2 | AAAcTGGTctAaCAAcTT | ||