Propagation of SdaR regulog to Pectobacterium carotovorum WPP14
| Source regulog: | SdaR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | SdaR |
| Regulation mode: | activator |
| Biological process: | Glucarate utilization; Galactarate utilization |
| Effector: | Glycerate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pectobacterium carotovorum WPP14 |
| Orthologous TF(s) | null |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -80
Score: 4.3 Sequence: CTTTGTTAATTTGCACAATG
Locus tag: null
|
||||
| null | -80 | 4.3 | CTTTGTTAATTTGCACAATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdaR | ||||
| Ortholog function: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0162 | -69 | 5.3 | CTTTAGGCATTTGCACAATG |
| Salmonella typhimurium LT2 | STM0210 | -71 | 5.8 | TTTTGTGCATTTGCACAATG |
| Citrobacter koseri ATCC BAA-895 | CKO_03205 | -17 | 5.1 | GTTTGTGCAGATGCACAATG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00177 | -17 | 5.4 | CTTAGTGCAAATGCACAATG |
| Enterobacter sp. 638 | Ent638_0702 | -71 | 5.3 | CTTTGTGCATTCGCACAATG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3300 | -80 | 4.3 | CTTTGTTAATTTGCACAATG |
|
Position: -263
Score: 4.6 Sequence: TATAGGGCAAGTGCACCAAC
Locus tag: null
|
||||
| null | -263 | 4.6 | TATAGGGCAAGTGCACCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gudP | ||||
| Ortholog function: D-glucarate permease, MFS family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2789 | -385 | 4.7 | TTTCAGGCAAATGCCAGTAA |
| Salmonella typhimurium LT2 | STM2962 | -376 | 5.5 | CTTTGTGCATATGCCCGCAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04143 | -388 | 4.9 | CATCAGGCATTTGCCCTAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03132 | -376 | 4.4 | CTTTAGGCAAACGCCACAAT |
| -221 | 4.6 | TTTCAGGCATTCGCCACAAA | ||
| Enterobacter sp. 638 | Ent638_3242 | -240 | 4.9 | CGTTGTGCTTATGCCTCAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3577 | -440 | 4.2 | CATTATGCAATTGACCTAAG |
| -264 | 4.6 | TATAGGGCAAGTGCACCAAC | ||
|
Position: -301
Score: 4.6 Sequence: GTTGGTGCACTTGCCCTATA
Locus tag: null
|
||||
| null | -301 | 4.6 | GTTGGTGCACTTGCCCTATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: garD | ||||
| Ortholog function: D-galactarate dehydratase (EC 4.2.1.42) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3128 | -250 | 4.5 | CATTGTGCAAATGCTAATTT |
| -208 | 6 | TTTTGAGCATATGCACATAA | ||
| Salmonella typhimurium LT2 | STM3250 | -276 | 4.8 | CATTGTGCAAACGCTCATTA |
| -233 | 5.1 | TTTTGAGCATACGCCCATGA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04527 | -223 | 5.6 | TTTTGAGCATTTGCACAACG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03540 | -206 | 4.7 | AATTGTGCTTATGCCATAAG |
| Enterobacter sp. 638 | Ent638_3570 | -224 | 5.4 | ATTTGAGCATATGCACAACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3578 | -316 | 4.6 | GTTGGTGCACTTGCCCTATA |
| -140 | 4.2 | CTTAGGTCAATTGCATAATG | ||