Propagation of NarP regulog to Pectobacterium carotovorum WPP14

Reference regulog properties
Source regulog:	NarP - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	activator (repressor)
Biological process:	Nitrate and nitrite respiration
Effector:	Nitrate; Nitrite
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Pectobacterium carotovorum WPP14
Orthologous TF(s)	null
Regulated genes	15

Built upon 125 sites [see more]

Predicted regulatory interactions in *Pectobacterium carotovorum WPP14*
	Locus tag	Position	Score	Sequence
Position: -122 Score: 4.3 Sequence: TACCTCTTTATAGGTG Locus tag: null
	null	-122	4.3	TACCTCTTTATAGGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG
Ortholog function: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2)
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1408	-122	4.3	TACCCCTTTGTAGGTG

Position: -310 Score: 4.5 Sequence: TAACTCTAATTGAGTA Locus tag: null
	null	-310	4.5	TAACTCTAATTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaR
Ortholog function: Conserved hypothetical protein
Citrobacter koseri ATCC BAA-895	CKO_01824	-234	3.7	TAACCAATAAATGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1474	-170	4.2	TAACCACAATTGAGTA

Position: -98 Score: 4.6 Sequence: TAACTCTTTAGGGTTA Locus tag: null
	null	-98	4.6	TAACTCTTTAGGGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccmA
Ortholog function: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Escherichia coli str. K-12 substr. MG1655	b2201	-129	4.6	TACCCCGATCGGGGTA
Salmonella typhimurium LT2	STM2254	-132	4.8	TACCTCTATCGGGGTA
Citrobacter koseri ATCC BAA-895	CKO_00574	-612	4.6	TACCCCAATCGGGGTA
Yersinia pestis KIM	y1567	-112	4.8	TACCTCTATAAGGGTA
Serratia proteamaculans 568	Spro_3391	-49	4.9	TACCCCTATTGGAGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1882	-86	4.6	TAACCCTTTAGGGTTA
Edwardsiella tarda EIB202	ETAE_2461	-64	4.4	TACCCCGAATGAGTTA

Position: -217 Score: 4.2 Sequence: CACTCCTTAATGAGTA Position: -106 Score: 4.7 Sequence: TACTCACTAGTGGGTA Locus tag: null
	null	-217	4.2	CACTCCTTAATGAGTA
		-106	4.7	TACTCACTAGTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narX
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655	b1222	-228	4	TTACCCATAGTGAGTA
		-118	3.8	TAACTCTTTCCGGGTA
Salmonella typhimurium LT2	STM1766	-230	4.3	TTACCCTTAATGAGTA
		-120	4.5	TAACTCGTTATAGGTA
Citrobacter koseri ATCC BAA-895	CKO_01297	-249	4.4	TGCCCCTTAGTGAGTA
		-139	4.5	TAACTCGTTATAGGTA
Serratia proteamaculans 568	Spro_2899	-138	4.7	TACTTCGTTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2029	-217	4.2	CACTCCTTAATGAGTA
		-106	4.7	TACTCACTAGTGGGTA
Proteus mirabilis HI4320	PMI3569	-73	4.5	TACTCCCTTTGGAGTA

Position: -201 Score: 4.8 Sequence: TACCCACTAGTGAGTA Locus tag: null
	null	-201	4.8	TACCCACTAGTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2030	-246	4.8	TACCCACTAGTGAGTA
		-135	4.3	TACTCATTAAGGAGTG

Position: -293 Score: 3.7 Sequence: TACCTCTAAATAGTCG Position: -194 Score: 4.2 Sequence: TAATTCTTTGGTGGTA Locus tag: null
	null	-293	3.7	TACCTCTAAATAGTCG
		-194	4.2	TAATTCTTTGGTGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4)
Serratia proteamaculans 568	Spro_2883	-193	3.8	TGATACTTTAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2031	-194	4.3	TAATTCTTTAGTGGTA
Proteus mirabilis HI4320	PMI3571	-237	4.8	TACTCCAAAGGGAGTA

Position: -44 Score: 4.9 Sequence: TACCTACTTAGGGGTA Locus tag: null
	null	-44	4.9	TACCTACTTAGGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Escherichia coli str. K-12 substr. MG1655	b1256	-55	4.5	TACTCCAATGTAGGTA
Salmonella typhimurium LT2	STM1732	-55	4.7	TACTTCATTGTGGGTA
Citrobacter koseri ATCC BAA-895	CKO_01333	-55	4.5	TACTCCATTGTAGGTA
Yersinia pestis KIM	y2044	-43	4.7	TACTCATTTGTAGGTA
Serratia proteamaculans 568	Spro_2674	-28	4.5	TACCCGTAAGTAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2303	-56	4.9	TACCTACTTAGGGGTA
Edwardsiella tarda EIB202	ETAE_1528	-52	3.7	TCACTCAATATGGTTA
Proteus mirabilis HI4320	PMI1350	-59	4.9	TACTTATTAATGGGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu2478	-55	3.8	TTCTAATATATGAGTA

Position: -289 Score: 4 Sequence: CACCCACAAATAGGTA Locus tag: null
	null	-289	4	CACCCACAAATAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655	b1241	-215	4.7	TACCCAGAAGTGAGTA
Salmonella typhimurium LT2	STM1749	-216	4.6	TACTCAGAAGTGAGTA
Citrobacter koseri ATCC BAA-895	CKO_01318	-216	4.6	TACTCAGAAGTGAGTA
Yersinia pestis KIM	y2023	-260	4	TACCTAAGAATAGTTA
Serratia proteamaculans 568	Spro_2704	-252	4	TACCCAAGAGTAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2326	-289	4	CACCCACAAATAGGTA
Edwardsiella tarda EIB202	ETAE_1508	-239	4.4	TACCCAAGAATGAGTA

Position: -81 Score: 4.8 Sequence: TACCTCGTAAGCGGTA Locus tag: null
	null	-81	4.8	TACCTCGTAAGCGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN
Escherichia coli str. K-12 substr. MG1655	b4209	-79	3.7	TGCTACGTAAGGGTTA
Salmonella typhimurium LT2	STM4399	-78	3.9	CACCCCGAAAGAGTTA
Citrobacter koseri ATCC BAA-895	CKO_03623	-78	3.9	TGACCCGAAAGGGTTA
Yersinia pestis KIM	y0652	-108	4.4	TACCCACTTGGAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3606	-81	4.8	TACCTCGTAAGCGGTA

Position: -33 Score: 4.3 Sequence: TACCTCTGAAAAGGTA Locus tag: null
	null	-33	4.3	TACCTCTGAAAAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase maturation
Escherichia coli str. K-12 substr. MG1655	b3739	-31	4.6	TACCTCGAAGGGAGCA
Salmonella typhimurium LT2	STM3872	-30	4.5	TACCTCGAAGTGAGCA
Citrobacter koseri ATCC BAA-895	CKO_00079	-30	4.6	TACCTCGAAGGGAGCA
Serratia proteamaculans 568	Spro_0001	-33	4.6	TACCTCCTCAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4519	-33	4.3	TACCTCTGAAAAGGTA
Edwardsiella tarda EIB202	ETAE_3526	-156	4.4	TACCTCCTGGGGGGTA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NarP regulog to Pectobacterium carotovorum WPP14

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --