Propagation of AraC regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601
| Source regulog: | AraC - Enterobacterales |
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator (repressor) |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
| Orthologous TF(s) | SSPA0102 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -173
Score: 8.4 Sequence: TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA
Locus tag: SSPA0101
|
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| SSPA0101 | -173 | 8.4 | TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: Ribulokinase (EC 2.7.1.16) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03319 | -174 | 8.3 | TAACAAAAGTGTCTATA-(4)-CGACAGAAATGTCCACA |
| -100 | 8.1 | TAGCATTTTAATCCATA-(4)-TAGCGGATCCTGCCTGA | ||
| Enterobacter sp. 638 | Ent638_0610 | -172 | 8.6 | TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA |
| -98 | 8.1 | CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA | ||
| Escherichia coli str. K-12 substr. MG1655 | b0063 | -173 | 8.7 | TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA |
| -99 | 8 | TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00062 | -172 | 8.7 | TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA |
| -98 | 8.5 | CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA | ||
| Salmonella typhimurium LT2 | STM0103 | -173 | 8.4 | TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA |
| -99 | 8.1 | TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA | ||
|
Position: -134
Score: 7.2 Sequence: TAGCATAATAATGAATA-(4)-AAGACGAATAAGGAATG
Locus tag: SSPA2172
|
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| SSPA2172 | -134 | 7.2 | TAGCATAATAATGAATA-(4)-AAGACGAATAAGGAATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araJ | ||||
| Ortholog function: Protein AraJ precursor | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01860 | -310 | 4.4 | GGACGGTAAAGGCGACA-(4)-TAAAACCGACATCAACA |
| Salmonella typhimurium LT2 | STM0394 | -134 | 7.1 | TAGCATAATAATGAATA-(4)-AAGACGGATAAGGAATG |
|
Position: -99
Score: 6.9 Sequence: TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
Locus tag: SSPA2686
|
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| SSPA2686 | -99 | 6.9 | TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araE | ||||
| Ortholog function: Low-affinity L-arabinose transport system proton symport protein | ||||
| Enterobacter sp. 638 | Ent638_3294 | -179 | 4.6 | TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA |
| -158 | 4.8 | TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03264 | -159 | 7.5 | CAGCAATATAGTCCATA-(4)-TGGCTTATCCTGCCTGA |
| -73 | 4.9 | TGGCAGGAAAAAAATGA-(4)-AATCAGTAACGACTCTA | ||
| Salmonella typhimurium LT2 | STM3016 | -99 | 6.9 | TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA |