Propagation of FruR regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601
| Source regulog: | FruR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | activator (repressor) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | Fructose-1-phosphate; Fructose-1,6-diphosphate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
| Orthologous TF(s) | SSPA0116 |
| Regulated genes | 24 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -328
Score: 4.4 Sequence: TCTGAACCGATTCAAC
Locus tag: SSPA0150
|
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| SSPA0150 | -328 | 4.4 | TCTGAACCGATTCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroP | ||||
| Ortholog function: Aromatic amino acid transport protein AroP | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0112 | -305 | 4.2 | ATTGAACCGATTCACT |
| Salmonella typhimurium LT2 | STM0150 | -325 | 4.4 | TCTGAACCGATTCAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_03262 | -303 | 4.4 | TCTGAACCGATTCAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00116 | -408 | 4.4 | TCTGAACCGATTCAAC |
| Enterobacter sp. 638 | Ent638_0658 | -304 | 4.4 | TCTGAACCGATTCACC |
|
Position: -253
Score: 4.5 Sequence: GTTGAATCGGTTCAGA
Locus tag: SSPA0151
|
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| SSPA0151 | -253 | 4.5 | GTTGAATCGGTTCAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pdhR | ||||
| Ortholog function: Transcriptional repressor for pyruvate dehydrogenase, GntR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0113 | -251 | 4.2 | AGTGAATCGGTTCAAT |
| Salmonella typhimurium LT2 | STM0151 | -253 | 4.5 | GTTGAATCGGTTCAGA |
| Citrobacter koseri ATCC BAA-895 | CKO_03260 | -253 | 4.5 | GTTGAATCGGTTCAGA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00117 | -251 | 4.5 | GTTGAATCGGTTCAGA |
| Enterobacter sp. 638 | Ent638_0659 | -252 | 4.4 | GGTGAATCGGTTCAGA |
| Erwinia amylovora ATCC 49946 | EAM_0746 | -213 | 4.2 | GCTGGCTGGTTTCAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3790 | -254 | 4.1 | ATTTAAACGGTTCAGC |
|
Position: -219
Score: 4.7 Sequence: GCTGAATCGATTTTAT
Locus tag: SSPA0407
|
||||
| SSPA0407 | -219 | 4.7 | GCTGAATCGATTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptsH | ||||
| Ortholog function: PTS family, Hpr protein, phosphohistidinoprotein-hexose phosphotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2415 | -219 | 4.7 | GCTGAATCGATTTTAT |
| Salmonella typhimurium LT2 | STM2431 | -219 | 4.7 | GCTGAATCGATTTTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00377 | -219 | 5.1 | GCTGAATCGATTTAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02762 | -216 | 4.7 | GCTGAATCGATTTTAT |
| Enterobacter sp. 638 | Ent638_2943 | -154 | 4.7 | GCTGAATCGATTTTAT |
| Erwinia amylovora ATCC 49946 | EAM_2391 | -229 | 5.1 | GCTGAATCGATTTACC |
| Yersinia pestis KIM | y1488 | -332 | 5.1 | GCTGAATCGATTTACC |
| Serratia proteamaculans 568 | Spro_3448 | -231 | 5 | GCTGAATCGATTTACT |
| Edwardsiella tarda EIB202 | ETAE_1132 | -211 | 5.1 | GCTGAATCGATTTAAC |
|
Position: -134
Score: 4 Sequence: GCTGAAACAAGAAAGT
Locus tag: SSPA0424
|
||||
| SSPA0424 | -134 | 4 | GCTGAAACAAGAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glk | ||||
| Ortholog function: Glucokinase (EC 2.7.1.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2388 | -134 | 4.9 | GCTGAAACGATAAAGT |
| Salmonella typhimurium LT2 | STM2403 | -134 | 4 | GCTGAAACAAGAAAGT |
| Citrobacter koseri ATCC BAA-895 | CKO_00412 | -134 | 4.9 | GCTGAAACGATAAAGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02738 | -193 | 4.9 | GCTGAAACGATAAAGT |
| Enterobacter sp. 638 | Ent638_2921 | -134 | 4.5 | GCTGAAACGGTAAAGT |
| Yersinia pestis KIM | y1505 | -125 | 4.6 | GCTGAAACGTTTTTAT |
| Serratia proteamaculans 568 | Spro_3407 | -127 | 3.9 | GCTGAAACGTTTTTTG |
|
Position: -283
Score: 3.6 Sequence: ACGGACACGATTCAAC
Locus tag: SSPA0500
|
||||
| SSPA0500 | -283 | 3.6 | ACGGACACGATTCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoA | ||||
| Ortholog function: NADH dehydrogenase I chain A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2288 | -283 | 3.6 | ACGGACACGATTCAAC |
| Salmonella typhimurium LT2 | STM2328 | -283 | 3.6 | ACGGACACGATTCAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00508 | -283 | 3.6 | ACGGACACGATTCAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02678 | -375 | 3.6 | aCgGAcaCGATTCAaC |
| Enterobacter sp. 638 | Ent638_2832 | -283 | 3.6 | ACGGACACGATTCAAC |
| Erwinia amylovora ATCC 49946 | EAM_2292 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Yersinia pestis KIM | y1630 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Serratia proteamaculans 568 | Spro_3308 | -263 | 4.3 | ACTGACACGATTTAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3028 | -258 | 4.4 | ACTGACTCGATTTAGC |
| Edwardsiella tarda EIB202 | ETAE_2385 | -135 | 4.7 | GCTGGAGCGATTCGGC |
| Proteus mirabilis HI4320 | PMI1762 | -244 | 4.3 | aCTGAcaCGTTTtAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3089 | -254 | 4.3 | ACTGACACGTTTTAGC |
|
Position: -101
Score: 5.1 Sequence: CTTGAAACGTTTCAGC
Position: -35
Score: 5.4 Sequence: GCTGAATCGTTTCAAT
Locus tag: SSPA0606
|
||||
| SSPA0606 | -101 | 5.1 | CTTGAAACGTTTCAGC | |
| -35 | 5.4 | GCTGAATCGTTTCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruB | ||||
| Ortholog function: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2169 | -35 | 5.4 | GCTGAATCGTTTCAAT |
| Salmonella typhimurium LT2 | STM2206 | -35 | 5.4 | GCTGAATCGTTTCAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00613 | 26 | 5.1 | CTTGAAACGTTTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02600 | -35 | 5.3 | GCTGAAACGATTCAAT |
| Enterobacter sp. 638 | Ent638_2763 | -36 | 4.8 | GCTGAAACGATTCAAG |
| Erwinia amylovora ATCC 49946 | EAM_2223 | -35 | 4.8 | GCTGAAACGATTCAAA |
| Yersinia pestis KIM | y2887 | -36 | 5.3 | GCTGAAACGATTCAAT |
| Serratia proteamaculans 568 | Spro_3230 | -35 | 5.3 | GCTGAAACGATTCAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2729 | -37 | 5.3 | GCTGAAACGATTCAAC |
| Edwardsiella tarda EIB202 | ETAE_2303 | -56 | 5.3 | GCTGAAACGATTCAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1992 | -104 | 5.3 | GTTGAAACGTTTCAGT |
|
Position: -113
Score: 4.7 Sequence: CCTGAAACGATTTTGC
Locus tag: SSPA0918
|
||||
| SSPA0918 | -113 | 4.7 | CCTGAAACGATTTTGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: edd | ||||
| Ortholog function: Phosphogluconate dehydratase (EC 4.2.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1851 | -113 | 4.4 | ACTGAAACGTTTTTGC |
| Salmonella typhimurium LT2 | STM1885 | -113 | 4.7 | CCTGAAACGATTTTGC |
|
Position: -83
Score: 4.5 Sequence: TCTGAATCGATTCGCT
Locus tag: SSPA0973
|
||||
| SSPA0973 | -83 | 4.5 | TCTGAATCGATTCGCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manX | ||||
| Ortholog function: PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) | ||||
| Salmonella typhimurium LT2 | STM1830 | -83 | 4.5 | TCTGAATCGATTCGCT |
| Citrobacter koseri ATCC BAA-895 | CKO_01161 | -80 | 4 | TCTGAATCGATTCGAG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02333 | -81 | 4.5 | ACTGAATCGATTTTGT |
| Enterobacter sp. 638 | Ent638_2386 | -82 | 4.7 | TCTGAATCGATTCGGT |
|
Position: -265
Score: 4.6 Sequence: GCTGAAAGGTGTCAGC
Locus tag: SSPA1048
|
||||
| SSPA1048 | -265 | 4.6 | GCTGAAAGGTGTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1241 | -264 | 4.6 | GCTGAAAGGTGTCAGC |
| Salmonella typhimurium LT2 | STM1749 | -265 | 4.6 | GCTGAAAGGTGTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01318 | -265 | 4.6 | GCTGAAAGGTGTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -260 | 4.5 | GCTGAAAGGTATCAGC |
| Enterobacter sp. 638 | Ent638_2304 | -276 | 4.5 | GCTGAAAGGTATCAGC |
| Erwinia amylovora ATCC 49946 | EAM_1900 | -246 | 4.6 | GCTGAATGGTATCAGC |
| Yersinia pestis KIM | y2023 | -309 | 4.7 | GCTGAATGGTGTCAGC |
| Serratia proteamaculans 568 | Spro_2704 | -301 | 4.7 | GCTGAATGGTGTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -338 | 4.7 | GCTGAATGGTGTCAGC |
| Edwardsiella tarda EIB202 | ETAE_1508 | -288 | 4.7 | GCTGAATGGTGTCAGC |
| Proteus mirabilis HI4320 | PMI1486 | -269 | 4.6 | GCTGAAAGGTGTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -162 | 4.5 | GCTGAAAGGAATCAGC |
|
Position: -275
Score: 4.9 Sequence: CTTGAATGGTTTCAGC
Locus tag: SSPA1371
|
||||
| SSPA1371 | -275 | 4.9 | CTTGAATGGTTTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pykF | ||||
| Ortholog function: Pyruvate kinase (EC 2.7.1.40) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1676 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Salmonella typhimurium LT2 | STM1378 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01709 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02133 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Enterobacter sp. 638 | Ent638_1768 | -221 | 5 | GGTGAATGGTTTCAGC |
| Erwinia amylovora ATCC 49946 | EAM_1657 | -226 | 4.6 | TTTGAATGGTTTCAGC |
| Yersinia pestis KIM | y1944 | -258 | 5.1 | GTTGAATGGTTTCAGC |
| Serratia proteamaculans 568 | Spro_2187 | -239 | 5.1 | GTTGAATGGTTTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1867 | -241 | 4.7 | ATTGAATGGTTTCAGC |
| Edwardsiella tarda EIB202 | ETAE_1850 | -230 | 5.1 | GTTGAATGGTTTCAGC |
| Proteus mirabilis HI4320 | PMI1405 | -269 | 5 | GTTGAAAGGTTTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2613 | -344 | 5.1 | GTTGAATGGTTTCAGC |
|
Position: -103
Score: 4.6 Sequence: GCTTGAACGATTCACC
Locus tag: SSPA1386
|
||||
| SSPA1386 | -103 | 4.6 | GCTTGAACGATTCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppsA | ||||
| Ortholog function: Phosphoenolpyruvate synthase (EC 2.7.9.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1702 | -102 | 4.6 | GCTTGAACGATTCACC |
| Salmonella typhimurium LT2 | STM1349 | -103 | 4.6 | GCTTGAACGATTCACC |
| Citrobacter koseri ATCC BAA-895 | CKO_01725 | -102 | 4.6 | GCTTGAACGATTCACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02160 | -108 | 4.6 | GCTTGAACGATTCACC |
| Enterobacter sp. 638 | Ent638_1745 | -103 | 4.4 | GCTTACACGATTCACC |
| Erwinia amylovora ATCC 49946 | EAM_1646 | -104 | 3.7 | GCCAGAGCGATTCAAC |
| Yersinia pestis KIM | y1930 | -193 | 4.4 | GGTTGATCGATTCACC |
| Serratia proteamaculans 568 | Spro_2174 | -132 | 4.4 | GGTTGATCGATTCACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1853 | -117 | 4.4 | GGTTGATCGATTCACC |
| Edwardsiella tarda EIB202 | ETAE_1789 | -113 | 4.4 | GGTGTAACGATTCACC |
| Proteus mirabilis HI4320 | PMI1421 | -124 | 4.4 | GGTTGATCGATTCACC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2628 | -114 | 4.4 | GGTTGATCGATTCACC |
|
Position: -87
Score: 3.7 Sequence: ATTGACACGATTCCGC
Locus tag: SSPA1445
|
||||
| SSPA1445 | -87 | 3.7 | ATTGACACGATTCCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapA | ||||
| Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1779 | -87 | 3.7 | ATTGACACGATTCCGC |
| Salmonella typhimurium LT2 | STM1290 | -87 | 3.7 | ATTGACACGATTCCGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01800 | -87 | 3.7 | ATTGACACGATTCCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01197 | -87 | 3.7 | ATTGACACGATTCCGC |
| Enterobacter sp. 638 | Ent638_1675 | -87 | 3.7 | ATTGACACGATTCCGC |
| Erwinia amylovora ATCC 49946 | EAM_1931 | -78 | 3.7 | ATTGACACGATTCCGC |
| Yersinia pestis KIM | y2165 | -78 | 3.7 | ATTGACACGATTCCGC |
| Serratia proteamaculans 568 | Spro_2728 | -87 | 3.7 | ATTGACACGATTCCGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2344 | -93 | 3.7 | ATTGACACGATTCCGC |
| Edwardsiella tarda EIB202 | ETAE_1483 | -87 | 3.7 | ATTGACACGATTCCGC |
| Proteus mirabilis HI4320 | PMI1504 | -88 | 3.7 | ATTGACACGATTCCGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2558 | -88 | 3.7 | ATTGACACGATTCCGC |
|
Position: -137
Score: 5.4 Sequence: GCTGAAGCGTTTCAGT
Locus tag: SSPA2740
|
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| SSPA2740 | -137 | 5.4 | GCTGAAGCGTTTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epd | ||||
| Ortholog function: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2927 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Salmonella typhimurium LT2 | STM3070 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04297 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03356 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Enterobacter sp. 638 | Ent638_3340 | -139 | 5.4 | GCTGAAGCGTTTCAGT |
| Erwinia amylovora ATCC 49946 | EAM_2813 | -131 | 5.4 | GCTGAAGCGTTTCAGT |
| Yersinia pestis KIM | y3309 | -161 | 5.4 | GCTGAAGCGTTTCAGT |
| Serratia proteamaculans 568 | Spro_3946 | -211 | 5.4 | GCTGAAGCGTTTCAGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3913 | -119 | 5.4 | GCTGAAGCGTTTCAGT |
| Edwardsiella tarda EIB202 | ETAE_2958 | -136 | 5.4 | GCTGAAGCGTTTCAGT |
| Proteus mirabilis HI4320 | PMI0241 | -135 | 5.1 | GCTGAACCGTTTCAGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0955 | -139 | 5.2 | GCTGAATCGTTTCATT |
|
Position: -225
Score: 4.3 Sequence: GCTGAAGCGAGACACC
Locus tag: SSPA3110
|
||||
| SSPA3110 | -225 | 4.3 | GCTGAAGCGAGACACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: Catabolite gene activator (cAMP receptor protein), CRP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3357 | -220 | 4.3 | GCTGAAGCGAGACACC |
| Salmonella typhimurium LT2 | STM3466 | -225 | 4.3 | GCTGAAGCGAGACACC |
| Citrobacter koseri ATCC BAA-895 | CKO_04777 | -227 | 4.3 | GCTGAAGCGAGACACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03743 | -224 | 4.3 | GCTGAAGCGAGACACC |
| Enterobacter sp. 638 | Ent638_3784 | -228 | 4.3 | GCTGAAGCGAGACACC |
| Erwinia amylovora ATCC 49946 | EAM_3225 | -284 | 4.4 | GCTGAAGCGAGACAAC |
| Yersinia pestis KIM | y3956 | -255 | 4.9 | GCTGAAGCGATACAAC |
| Serratia proteamaculans 568 | Spro_4580 | -300 | 4.4 | GCTGAAGCGAGACAAC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4064 | -296 | 4.4 | GCTGAAGCGAGACAAC |
| Edwardsiella tarda EIB202 | ETAE_3299 | -242 | 4.5 | GCTGAAGCGAGACAGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0395 | -241 | 4.2 | GCTGAAACAATACAAG |
|
Position: -47
Score: 4.6 Sequence: GCTGAATCGTTAAGGT
Locus tag: SSPA3118
|
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| SSPA3118 | -47 | 4.6 | GCTGAATCGTTAAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nirB | ||||
| Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3365 | -47 | 4.6 | GCTGAATCGTTAAGGT |
| Salmonella typhimurium LT2 | STM3474 | -47 | 4.6 | GCTGAATCGTTAAGGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04789 | -47 | 4.6 | GCTGAATCGTTAAGGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03752 | -47 | 4.6 | GCTGAATCGTTAAGGT |
| Enterobacter sp. 638 | Ent638_3793 | -47 | 4.6 | GCTGAATCGTTAAGGT |
| Yersinia pestis KIM | y3945 | -168 | 4.4 | GCTGATACCTTTCAGC |
| Serratia proteamaculans 568 | Spro_4595 | -169 | 4.3 | ACTGGCTCGTTTCAGC |
| Proteus mirabilis HI4320 | PMI1479 | -93 | 4.7 | GCTGAATTGATTAAGC |
|
Position: -287
Score: 4.3 Sequence: GGTGAATCGATATTGT
Locus tag: SSPA3140
|
||||
| SSPA3140 | -287 | 4.3 | GGTGAATCGATATTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pckA | ||||
| Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3403 | -286 | 4.3 | GGTGAATCGATACTTT |
| Salmonella typhimurium LT2 | STM3500 | -287 | 4.3 | GGTGAATCGATATTGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04825 | -287 | 4 | GGTGAATCGATATTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03773 | -286 | 4.5 | GTTGAATCGATTTTCC |
| Serratia proteamaculans 568 | Spro_2098 | -151 | 4.1 | GCTGAATCCGGTCAGC |
| Proteus mirabilis HI4320 | PMI3015 | -209 | 4.3 | ACTGATTCGATTTAGC |
|
Position: -124
Score: 4.1 Sequence: AGTTGAACGATTCAGT
Locus tag: SSPA3302
|
||||
| SSPA3302 | -124 | 4.1 | AGTTGAACGATTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: mannitol-specific PTS system, IIABC components | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3599 | -123 | 4 | AGTTAACCGATTCAGT |
| Salmonella typhimurium LT2 | STM3685 | -124 | 4.1 | AGTTGAACGATTCAGT |
| Citrobacter koseri ATCC BAA-895 | CKO_05054 | -120 | 4.1 | AGTTGAACGATTCAGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03942 | -125 | 3.7 | AGCTAAACGATTCAGT |
| Enterobacter sp. 638 | Ent638_0136 | -122 | 3.7 | AGTTGAACGATTCGGT |
| Serratia proteamaculans 568 | Spro_0072 | -64 | 4 | GCTGGATCGTAACAAC |
|
Position: -87
Score: 4.1 Sequence: ATTTTATCGATTCAGC
Locus tag: SSPA3319
|
||||
| SSPA3319 | -87 | 4.1 | ATTTTATCGATTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmM | ||||
| Ortholog function: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3612 | -64 | 4.1 | ATTTTATCGATTCAGC |
| Salmonella typhimurium LT2 | STM3704 | -66 | 4.1 | ATTTTATCGATTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_05070 | -87 | 4.1 | ATTTTATCGATTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03956 | -86 | 4.6 | ATTTAAACGATTCAGC |
| Enterobacter sp. 638 | Ent638_0123 | -66 | 4.3 | ACTTTATCGATTCAGC |
|
Position: -122
Score: 5.1 Sequence: CCTGAATCAATTCAGC
Position: -75
Score: 3.9 Sequence: GTTGGATCGTTTCGAA
Locus tag: SSPA3633
|
||||
| SSPA3633 | -122 | 5.1 | CCTGAATCAATTCAGC | |
| -75 | 3.9 | GTTGGATCGTTTCGAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfkA | ||||
| Ortholog function: 6-phosphofructokinase (EC 2.7.1.11) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3916 | -121 | 5.1 | CCTGAATCAATTCAGC |
| Salmonella typhimurium LT2 | STM4062 | -122 | 5.1 | CCTGAATCAATTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_03085 | -128 | 5.1 | CCTGAATCAATTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04223 | -119 | 5.1 | CCTGAATCAATTCAGC |
| Enterobacter sp. 638 | Ent638_4056 | -170 | 5.1 | CCTGAATCAATTCAGC |
| Erwinia amylovora ATCC 49946 | EAM_0103 | -128 | 3.9 | CCTCAACCAATTCAGC |
| Yersinia pestis KIM | y0059 | -144 | 4.9 | CTTGAATCAATTCAGC |
| Serratia proteamaculans 568 | Spro_4807 | -141 | 4.9 | CTTGAATCAATTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4307 | -136 | 5.1 | CCTGAATCAATTCAGC |
| Edwardsiella tarda EIB202 | ETAE_3450 | -219 | 5.1 | CCTGAATCAATTCAGC |
| Proteus mirabilis HI4320 | PMI3203 | -119 | 5.1 | GTTGAATCAATTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4774 | -141 | 5.1 | GTTGAATCAATTCAGC |
|
Position: -209
Score: 4.1 Sequence: GCTGAACCGATTTCGC
Locus tag: SSPA3683
|
||||
| SSPA3683 | -209 | 4.1 | GCTGAACCGATTTCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppc | ||||
| Ortholog function: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3956 | -146 | 4.4 | GCTGAAGCGATTTCGC |
| Salmonella typhimurium LT2 | STM4119 | -209 | 4.1 | GCTGAACCGATTTCGC |
| Citrobacter koseri ATCC BAA-895 | CKO_03038 | -166 | 4.1 | GCTGAACCGATTTCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04245 | -109 | 4.4 | GCTGAAGCGATTTCGC |
| Enterobacter sp. 638 | Ent638_4030 | -126 | 4.1 | GCTGAACCGTTTTCGC |
|
Position: -250
Score: 4.8 Sequence: CCTAAAGCGTTTCAGC
Locus tag: SSPA3731
|
||||
| SSPA3731 | -250 | 4.8 | CCTAAAGCGTTTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceB | ||||
| Ortholog function: Malate synthase (EC 2.3.3.9) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4014 | -250 | 4.6 | CGTTAAGCGATTCAGC |
| Salmonella typhimurium LT2 | STM4183 | -250 | 4.8 | CCTAAAGCGTTTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_03906 | -250 | 4.8 | CCTAAAGCGTTTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04395 | -242 | 4.8 | CCTAAAGCGTTTCAGC |
| Enterobacter sp. 638 | Ent638_0218 | -252 | 4.8 | CCTAAAGCGTTTCAGC |
|
Position: -89
Score: 4.3 Sequence: GCTGGCGCGATTCACC
Locus tag: SSPA3934
|
||||
| SSPA3934 | -89 | 4.3 | GCTGGCGCGATTCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fbp | ||||
| Ortholog function: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4232 | -90 | 4.3 | GCTGGCGCGATTCACC |
| Salmonella typhimurium LT2 | STM4415 | -89 | 4.3 | GCTGGCGCGATTCACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04626 | -91 | 4.3 | GCTGGCGCGATTCACC |
| Enterobacter sp. 638 | Ent638_0418 | -115 | 4.3 | GCTGGCGCGATTCACC |