Propagation of GntR regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601
| Source regulog: | GntR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
| Orthologous TF(s) | SSPA3169 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -212
Score: 6.1 Sequence: GTATTTTACCGGTAACATGA
Locus tag: SSPA0918
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| SSPA0918 | -212 | 6.1 | GTATTTTACCGGTAACATGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: edd | ||||
| Ortholog function: 6-phosphogluconate dehydratase (EC 4.2.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1851 | -212 | 6.3 | TTATTTTACCGGTAACATGA |
| Salmonella typhimurium LT2 | STM1885 | -212 | 6.1 | GTATTTTACCGGTAACATGA |
| Citrobacter koseri ATCC BAA-895 | CKO_01115 | -211 | 6.3 | TTATTTTACCGGTAACATGA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02366 | -211 | 6.3 | TTATTTTACCGGTAACATGA |
| -2 | 5.4 | CAATGTTACGGGTAACAAAT | ||
| Enterobacter sp. 638 | Ent638_2420 | -210 | 6.3 | TTATTTTACCGGTAACATGA |
| Serratia proteamaculans 568 | Spro_4499 | -73 | 6.4 | CAATGTTACCGATAACATGT |
| -59 | 5.5 | ACATGTTACCGGTAACAAAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1836 | -359 | 5.9 | CATTGTTACCGGTATCATTT |
| Proteus mirabilis HI4320 | PMI2760 | -111 | 5.1 | GCTTGTTACCCGTAACAATG |
| -96 | 6.4 | CAATGTTACCGGTAACAAGT | ||
|
Position: -226
Score: 6 Sequence: ATATGTTACCCGTATCATTC
Locus tag: SSPA3152
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| SSPA3152 | -226 | 6 | ATATGTTACCCGTATCATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntT | ||||
| Ortholog function: High-affinity H+/gluconate symporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3415 | -178 | 5.9 | AGATGTTACCCGTATCATTC |
| -37 | 4.9 | TGACGTTACCCATAACAAAT | ||
| Salmonella typhimurium LT2 | STM3512 | -178 | 6 | ATATGTTACCCGTATCATTC |
| -37 | 4.7 | TGACGTTACCCATAACAAAG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04836 | -178 | 6 | ATATGTTACCCGTATCATTC |
| -37 | 4.9 | CGACGTTACCCATAACAAAT | ||
|
Position: -61
Score: 6.4 Sequence: CAATGTTACCGATAACAGTT
Locus tag: SSPA3168
|
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| SSPA3168 | -61 | 6.4 | CAATGTTACCGATAACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntK | ||||
| Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12) | ||||
| Salmonella typhimurium LT2 | STM3542 | -61 | 6.4 | CAATGTTACCGATAACAGTT |
| -48 | 5.1 | AACAGTTACCCGTAACAAAT | ||
|
Position: -29
Score: 3.8 Sequence: CTATTTTGGCGCTAATAAGA
Locus tag: SSPA3979
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| SSPA3979 | -29 | 3.8 | CTATTTTGGCGCTAATAAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnT | ||||
| Ortholog function: L-idonate and D-gluconate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4265 | -146 | 3.8 | TAtTtcTACtGaTAAgAaTT |
| -116 | 3.8 | TcAcGTTAtgcGTAACATag | ||
| Salmonella typhimurium LT2 | STM4482 | -116 | 4.3 | TcAcGTTAtgcGTAACATTg |
|
Position: -117
Score: 4.3 Sequence: TCACGTTATGCGTAACATTG
Locus tag: SSPA3981
|
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| SSPA3981 | -117 | 4.3 | TCACGTTATGCGTAACATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnD | ||||
| Ortholog function: L-idonate 5-dehydrogenase (EC 1.1.1.264) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4267 | -146 | 3.8 | TAtTtcTACtGaTAAgAaTT |
| -116 | 3.8 | TcAcGTTAtgcGTAACATag | ||
| Salmonella typhimurium LT2 | STM4484 | -116 | 4.3 | TcAcGTTAtgcGTAACATTg |
| Serratia proteamaculans 568 | Spro_3287 | -120 | 4.2 | TcAcGTTAaaGGTAACAgcT |
|
Position: -119
Score: 5.1 Sequence: CAATGTTACGCATAACGTGA
Locus tag: SSPA3982
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| SSPA3982 | -119 | 5.1 | CAATGTTACGCATAACGTGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnK | ||||
| Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4268 | -119 | 5 | CTATGTTACGCATAACGTGA |
| Salmonella typhimurium LT2 | STM4485 | -119 | 5.1 | CAATGTTACGCATAACGTGA |