Propagation of NagC regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601
| Source regulog: | NagC - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor (activator) |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
| Orthologous TF(s) | SSPA1920 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -141
Score: 5.2 Sequence: TTTTTTTCGATATCTAAAATAAT
Locus tag: SSPA0973
|
||||
| SSPA0973 | -141 | 5.2 | TTTTTTTCGATATCTAAAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manX | ||||
| Ortholog function: PTS system, mannose-specific IIAB component | ||||
| Salmonella typhimurium LT2 | STM1830 | -141 | 5.2 | TTTTTTTCGATATCTAAAATAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_01161 | -139 | 5.4 | TTTTTTTCGCTATCTAAAATAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02333 | -203 | 5 | TATTTTTTGCGCTGCAAAATTAT |
| -138 | 5.2 | ATTTTTTCACTGTCTAAAATAAT | ||
| Enterobacter sp. 638 | Ent638_2386 | -141 | 5.2 | ATTTTTTCACTGTCTAAAATAAT |
|
Position: -232
Score: 5.1 Sequence: CTTATTTATTATCGCGAATTATT
Locus tag: SSPA1423
|
||||
| SSPA1423 | -232 | 5.1 | CTTATTTATTATCGCGAATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chbB | ||||
| Ortholog function: PTS system, chitobiose-specific IIB component (EC 2.7.1.69) | ||||
| Salmonella typhimurium LT2 | STM1312 | -232 | 5.1 | CTTATTTATTATCGCGAATTATT |
|
Position: -147
Score: 5.8 Sequence: TTTAATTTGCGAGGCGAATTAAT
Locus tag: SSPA1917
|
||||
| SSPA1917 | -147 | 5.8 | TTTAATTTGCGAGGCGAATTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagE | ||||
| Ortholog function: PTS system, N-acetylglucosamine-specific IIABC component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0679 | -146 | 5.9 | TTTAATTTGCGATACGAATTAAA |
| Salmonella typhimurium LT2 | STM0685 | -241 | 4.8 | GATTTTTTGAATCATAAAATAAG |
| -147 | 5.8 | TTTAATTTGCGAGGCGAATTAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02485 | -151 | 6 | TTTAATTTGCGATACGAATTAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00700 | -123 | 6 | TTTAATTTGCGATACGAATTAAT |
| Erwinia amylovora ATCC 49946 | EAM_1148 | -226 | 4.8 | GATTTTTTGAATCATAAAATAAG |
| -132 | 5.4 | ATTAATTTGCTGTACGAATTTAT | ||
| Serratia proteamaculans 568 | Spro_1228 | -132 | 6 | TTTAATTTGCGATACGAAATAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1318 | -88 | 5.3 | ATTATTTTTCAACTAAAAATAAG |
|
Position: -202
Score: 5.8 Sequence: ATTAATTCGCCTCGCAAATTAAA
Locus tag: SSPA1918
|
||||
| SSPA1918 | -202 | 5.8 | ATTAATTCGCCTCGCAAATTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagB | ||||
| Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0678 | -209 | 5.9 | TTTAATTCGTATCGCAAATTAAA |
| -115 | 4.6 | CTTATTTTATCATTCAAAAAATC | ||
| Salmonella typhimurium LT2 | STM0684 | -202 | 5.8 | ATTAATTCGCCTCGCAAATTAAA |
| -108 | 4.8 | CTTATTTTATGATTCAAAAAATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02486 | -215 | 6 | ATTAATTCGTATCGCAAATTAAA |
| -121 | 4.6 | CTTATTTTATCATTCAAAAAATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00699 | -214 | 6 | ATTAATTCGTATCGCAAATTAAA |
| -120 | 4.6 | CTTATTTTATCATTCAAAAAATC | ||
| Enterobacter sp. 638 | Ent638_1193 | -215 | 6 | ATTAATTCGTATCGCAAATTAAA |
| -121 | 4.6 | CTTATTTTATCATTCAAAAAATC | ||
| Erwinia amylovora ATCC 49946 | EAM_1147 | -225 | 5.4 | ATAAATTCGTACAGCAAATTAAT |
| -131 | 4.8 | CTTATTTTATGATTCAAAAAATC | ||
| Yersinia pestis KIM | y1202 | -245 | 6 | ATTATTTCGTAACGCAAATTAAA |
| -151 | 5.2 | CTTATTTTATCATCCGAAAAAAT | ||
| Serratia proteamaculans 568 | Spro_1227 | -225 | 6 | ATTATTTCGTATCGCAAATTAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1326 | -211 | 5.7 | AATAATTCGCTACACAAATTAAA |
| -118 | 4.6 | CTTATTTCAAGATTAAAAAAAAC | ||
| Edwardsiella tarda EIB202 | ETAE_2617 | -221 | 5.6 | ATTATTTTTCTCCGCAAATTAAA |
| -127 | 4.6 | CTTATTTTATCATTCGAAAAATC | ||
| Proteus mirabilis HI4320 | PMI0454 | -248 | 6.1 | ATTATTTTGTATCGCAAATTAAT |
| -154 | 4.8 | CTTATTTTATGATTAAAAATATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1317 | -232 | 5 | TTTATTTTTCTTGCAAAAATAAG |
| -138 | 4.7 | CTTATTTTAATATAAAAAATATC | ||
|
Position: -140
Score: 4.7 Sequence: TATTTTTCAGATAATTAAATAAT
Locus tag: SSPA2753
|
||||
| SSPA2753 | -140 | 4.7 | TATTTTTCAGATAATTAAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galP | ||||
| Ortholog function: D-galactose transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2943 | -39 | 5.2 | CTTAATTCACAATAAAAAATAAC |
| Salmonella typhimurium LT2 | STM3091 | -139 | 4.7 | TATTTTTCAGATAATTAAATAAT |
|
Position: -233
Score: 4.8 Sequence: CTTTATTTATGGAGTAAAAAAAC
Locus tag: SSPA3456
|
||||
| SSPA3456 | -233 | 4.8 | CTTTATTTATGGAGTAAAAAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glmU | ||||
| Ortholog function: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3730 | -233 | 4.8 | GTTTATTCATTGATCGAAATAAG |
| Salmonella typhimurium LT2 | STM3862 | -233 | 4.8 | CTTTATTTATGGAGTAAAAAAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00067 | -233 | 4.8 | CTTTATTCATGGGTCAAAAAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04135 | -248 | 4.7 | CTTTATTCAGGTGGCGAAAAAAC |
| Enterobacter sp. 638 | Ent638_4135 | -233 | 5.2 | CTTTATTCATGAGGCGAAAAAAT |
| Yersinia pestis KIM | y4133 | -235 | 4.8 | CTTGTTTTCTGTCGTAAAATAAG |
| Serratia proteamaculans 568 | Spro_0010 | -242 | 5 | CTTTTTTTTTGTTTTAAAATAAG |
| Proteus mirabilis HI4320 | PMI3066 | -84 | 5.3 | AATATTTTGTGTAACGAAATATG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0038 | -85 | 4.7 | GCTTTTTTGTATTGCGAAATATG |