Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SiaR regulog to Yersinia pestis CA88-4125

Reference regulog properties
Source regulog: SiaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Sialic acid utilization
Effector: Glucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis CA88-4125
Orthologous TF(s) YPE_0257
Regulated genes 3
Built upon 14 sites [see more]
Predicted regulatory interactions in Yersinia pestis CA88-4125
Locus tag Position Score Sequence
Position: -46
Score: 5.9
Sequence: AATGGAGTTAAACTTCATT
Locus tag: YPE_0252
YPE_0252 -46 5.9 AATGGAGTTAAACTTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanE
Ortholog function: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Salmonella typhimurium LT2 STM1129 -37 4.9 AACGGAGCAAAACTTCAAA
Yersinia pestis KIM y1459 -46 5.9 AATGGAGTTAAACTTCATT
Edwardsiella tarda EIB202 ETAE_0521 -70 5.1 GATGGAGTATTGCTCCATA
-40 4.3 TATGGAGTTCAATTCTAAA
Proteus mirabilis HI4320 PMI2978 -71 4.5 TGAGAAATAAAACTCCGTA
-41 4.5 TTCGGAGTTACATTTCAAA
Position: -111
Score: 5.4
Sequence: AAAGGAGTTTAACTCCAAA
Locus tag: YPE_0254
YPE_0254 -111 5.4 AAAGGAGTTTAACTCCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanK
Ortholog function: N-acetylmannosamine kinase (EC 2.7.1.60)
Yersinia pestis KIM y1461 -111 5.4 AAAGGAGTTTAACTCCAAA
Position: -188
Score: 5.5
Sequence: AATGGAGTTTTACTCCTTT
Locus tag: YPE_0258
YPE_0258 -188 5.5 AATGGAGTTTTACTCCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanT
Ortholog function: Sialic acid transporter (permease) NanT
Yersinia pestis KIM y1465 -188 5.5 AATGGAGTTTTACTCCTTT
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