Propagation of ExuR regulog to Yersinia pestis CA88-4125
| Source regulog: | ExuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization |
| Effector: | Galacturonate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis CA88-4125 |
| Orthologous TF(s) | YPE_2689 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -240
Score: 5.2 Sequence: AAATCGGTATAACAACATT
Locus tag: YPE_1974
|
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| YPE_1974 | -240 | 5.2 | AAATCGGTATAACAACATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00609 | -31 | 5.3 | AATTTGGTATAACAACTTG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02604 | -34 | 5.5 | TTATTGGTATAACAACTTT |
| Enterobacter sp. 638 | Ent638_2767 | -32 | 5.7 | ATATTGGTATAACAACTTT |
| Yersinia pestis KIM | y2902 | -240 | 5.2 | AAATCGGTATAACAACATT |
| Serratia proteamaculans 568 | Spro_3238 | -80 | 5 | AATTTGGTATAACAAGATT |
| Edwardsiella tarda EIB202 | ETAE_2289 | -101 | 4.7 | GATTTGGTATGACAGATTA |
|
Position: -91
Score: 5.3 Sequence: AAACTGGTCTAACAACTTT
Locus tag: YPE_1975
|
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| YPE_1975 | -91 | 5.3 | AAACTGGTCTAACAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuB | ||||
| Ortholog function: D-mannonate oxidoreductase (EC 1.1.1.57) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00608 | -191 | 4.4 | AAGTTGTTATACCAAATTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02605 | -193 | 3.7 | AAAGTtGTtatACcAaTaa |
| Enterobacter sp. 638 | Ent638_2768 | -193 | 3.8 | AAAGTtGTtatACcAaTaT |
| Yersinia pestis KIM | y2903 | -91 | 5.3 | AAACTGGTCTAACAACTTT |
| Serratia proteamaculans 568 | Spro_3239 | -64 | 5.3 | AAACTGGTCTGATAACTTC |
| Edwardsiella tarda EIB202 | ETAE_2291 | -89 | 4.7 | CAAGTGGTCTAACACCTTT |
|
Position: -216
Score: 4.5 Sequence: TAACTGGACTGATAAATTA
Locus tag: YPE_2419
|
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| YPE_2419 | -216 | 4.5 | TAACTGGACTGATAAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaR | ||||
| Ortholog function: putative transcriptional regulator, LacI family | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -157 | 5.8 | TAAGTTGTGTGACAAGTTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -195 | 4.5 | TCATTGGTATAACTAGTAT |
| Enterobacter sp. 638 | Ent638_1314 | -175 | 5.6 | GAAGTTGTGTGACAAGTTC |
| Serratia proteamaculans 568 | Spro_3600 | -196 | 4.8 | TAATTGGACTGATAAATCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -176 | 4.8 | AAATTGGTTTACCAAATTG |
|
Position: -69
Score: 6 Sequence: TAATTGGTGTGATAACTTT
Locus tag: YPE_2686
|
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| YPE_2686 | -69 | 6 | TAATTGGTGTGATAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Yersinia pestis KIM | y3600 | -69 | 6 | TAATTGGTGTGATAACTTT |
| Serratia proteamaculans 568 | Spro_4321 | -70 | 6.2 | AAATTGGTGTGATAACTTT |
|
Position: -105
Score: 5.8 Sequence: TAAGTGGTATAACAAATCC
Locus tag: YPE_2689
|
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| YPE_2689 | -105 | 5.8 | TAAGTGGTATAACAAATCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuR | ||||
| Ortholog function: D-galacturonate transcriptional repressor, GntR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04496 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03522 | -48 | 5.8 | AAAGTGGTATAACAAATCG |
| Enterobacter sp. 638 | Ent638_3548 | -45 | 6.1 | AAAGTGGTATAACAAATCA |
| Yersinia pestis KIM | y3602 | -105 | 5.8 | TAAGTGGTATAACAAATCC |
| Serratia proteamaculans 568 | Spro_4323 | -57 | 5.8 | TAAGTGGTATAACAAATCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 5.9 | TAAGTGGTATAACAAATCA |
| Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 5.8 | AAAGTGGTATAACAACTCG |