Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlpR regulog to Providencia rustigianii DSM 4541

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Providencia rustigianii DSM 4541
Orthologous TF(s) PROVRUST_01378
Regulated genes 3
Built upon 64 sites [see more]
Predicted regulatory interactions in Providencia rustigianii DSM 4541
Locus tag Position Score Sequence
Position: -350
Score: 4.6
Sequence: TGTTTGATAAGGAACA
Position: -173
Score: 3.8
Sequence: TGTTTTTTAACGATTA
Locus tag: PROVRUST_00904
PROVRUST_00904 -350 4.6 TGTTTGATAAGGAACA
-173 3.8 TGTTTTTTAACGATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -218 3.9 TGTTTGATTTCGCGCA
-166 3.7 TGCGTCATTTTGAACA
Salmonella typhimurium LT2 STM2283 -219 3.9 TGTTTGATTTCGCGCA
Citrobacter koseri ATCC BAA-895 CKO_00537 -210 4.2 CGCGCATAATCGCTCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -217 4.3 TGTTTGATTTCGAGCA
Enterobacter sp. 638 Ent638_2804 -200 4.6 TGTTTGATTTCGAACA
Erwinia amylovora ATCC 49946 EAM_0195 -100 4.3 TGTGCGCAATGGAACA
Serratia proteamaculans 568 Spro_0199 -108 4.8 CGCTCGTTATGGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -52 4.5 CGTTCGTAATAGAACA
Edwardsiella tarda EIB202 ETAE_3116 -153 4.6 CGCTCGAAAATGAAAA
Proteus mirabilis HI4320 PMI3591 -92 4.5 CGTTCGTTAAAGAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -109 4.3 TTTTCGTTATGGAAAA
Position: -111
Score: 4.7
Sequence: TGTTCCTTATCAAACA
Locus tag: PROVRUST_00905
PROVRUST_00905 -111 4.7 TGTTCCTTATCAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: anaerobic glycerol-3-phosphate dehydrogenase subunit A
Escherichia coli str. K-12 substr. MG1655 b2241 -70 5 TGCGCGAAATCAAACA
Salmonella typhimurium LT2 STM2284 -69 5 TGCGCGAAATCAAACA
Citrobacter koseri ATCC BAA-895 CKO_00536 -69 5 TGCGCGAAATCAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -70 5.1 TGCTCGAAATCAAACA
Enterobacter sp. 638 Ent638_2805 -68 5 TGTTCGAAATCAAACA
Yersinia pestis KIM y0404 -90 4.3 TGTTTCTTATCAATCA
Serratia proteamaculans 568 Spro_0200 -73 4.7 TGTTCCTTATCAAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -83 4.7 TGCTCTTTATCAAACA
Edwardsiella tarda EIB202 ETAE_3115 -77 4.8 TGCTCCTTATCAAACA
Proteus mirabilis HI4320 PMI3592 -106 4.9 TGCTCATTATCAAACA
Position: -51
Score: 5
Sequence: TGAGCGAAAACGAACA
Locus tag: PROVRUST_01377
PROVRUST_01377 -51 5 TGAGCGAAAACGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA