Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of UxuR regulog to Escherichia coli 536

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli 536
Orthologous TF(s) ECP_4660
Regulated genes 5
Built upon 44 sites [see more]
Predicted regulatory interactions in Escherichia coli 536
Locus tag Position Score Sequence
Position: -62
Score: 5
Sequence: GAATTGGTTAACTAATAA
Locus tag: ECP_1561
ECP_1561 -62 5 GAATTGGTTAACTAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uidA
Ortholog function: beta-D-glucuronidase
Escherichia coli str. K-12 substr. MG1655 b1617 -62 4.8 GAATTGGTTAACTAATCA
-42 4.6 TTAAAGGTTGACCAGTAT
Position: -129
Score: 5.8
Sequence: TTATTGGTTAACCAATAT
Locus tag: ECP_1562
ECP_1562 -129 5.8 TTATTGGTTAACCAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uidR
Ortholog function: hexuronide repressor, TetR family
Escherichia coli str. K-12 substr. MG1655 b1618 -129 5.8 CTATTGGTTAACCAATTT
Position: -176
Score: 4.1
Sequence: AATTTATTATACCAATCT
Locus tag: ECP_2213
ECP_2213 -176 4.1 AATTTATTATACCAATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeiQ
Ortholog function: paralog of D-mannonate oxidoreductase
Escherichia coli str. K-12 substr. MG1655 b2172 -176 4.1 AATTTATTATACCAATCT
Yersinia pestis KIM y2903 -363 4.3 AtgTTGtTatACCgATTT
-250 3.9 tAtTgGacTtACCAATTT
-92 4.2 AAAcTGGTctAaCAAcTT
Position: -173
Score: 5.4
Sequence: TATTTGGTTGACCAGTTT
Locus tag: ECP_4660
ECP_4660 -173 5.4 TATTTGGTTGACCAGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
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