Propagation of NarP regulog to Salmonella enterica subsp. enterica serovar Typhi Ty2

Reference regulog properties
Source regulog:	NarP - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	activator (repressor)
Biological process:	Nitrate and nitrite respiration
Effector:	Nitrate; Nitrite
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Salmonella enterica subsp. enterica serovar Typhi Ty2
Orthologous TF(s)	t0618
Regulated genes	23

Built upon 125 sites [see more]

Predicted regulatory interactions in *Salmonella enterica subsp. enterica serovar Typhi Ty2*
	Locus tag	Position	Score	Sequence
Position: -131 Score: 4.4 Sequence: TACCCATTATGAGTTA Locus tag: t0075
	t0075	-131	4.4	TACCCATTATGAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: caiT
Ortholog function: L-carnitine/gamma-butyrobetaine antiporter
Salmonella typhimurium LT2	STM0074	-131	4.1	TACCCATCATGAGTTA

Position: -204 Score: 4.3 Sequence: TACCTCCTGGTGGGTA Locus tag: t0157
	t0157	-204	4.3	TACCTCCTGGTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Pyruvate utilization transcriptional regulator PdhR, GntR family
Salmonella typhimurium LT2	STM0151	-204	4.3	TACCTCCTGGTGGGTA
Citrobacter koseri ATCC BAA-895	CKO_03260	-204	4.2	TACTCCCAGGGGAGTA
Serratia proteamaculans 568	Spro_4012	-198	4.2	TACCTCGTAAATGGTA

Position: -22 Score: 4.2 Sequence: TACTTTTCAAGGAGTA Locus tag: t0386
	t0386	-22	4.2	TACTTTTCAAGGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: talA
Ortholog function: Transaldolase (EC 2.2.1.2)
Escherichia coli str. K-12 substr. MG1655	b2464	-22	4.2	TACTTTTCAAGGAGTA
Salmonella typhimurium LT2	STM2473	-22	4.2	TACTTTTCAAGGAGTA
Citrobacter koseri ATCC BAA-895	CKO_00330	-22	4.2	TACTTTTCAAGGAGTA

Position: -104 Score: 4.3 Sequence: TACCTGATAGTGGGTA Locus tag: t0528
	t0528	-104	4.3	TACCTGATAGTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfbV
Ortholog function: Predicted membrane protein
Escherichia coli str. K-12 substr. MG1655	b2295	-104	4.3	TACCTGATAGTGGGTA
Salmonella typhimurium LT2	STM2336	-104	4.3	TACCTGATAGTGGGTA
Citrobacter koseri ATCC BAA-895	CKO_00500	-105	4.3	TACCTGATAGTGGGTA

Position: -132 Score: 4.8 Sequence: TACCTCTATCGGGGTA Locus tag: t0604
	t0604	-132	4.8	TACCTCTATCGGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: napF
Ortholog function: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Escherichia coli str. K-12 substr. MG1655	b2208	-129	4.6	TACCCCGATCGGGGTA
Salmonella typhimurium LT2	STM2261	-132	4.8	TACCTCTATCGGGGTA
Yersinia pestis KIM	y1442	-158	4.3	TACTCATTATTCGGTA
Serratia proteamaculans 568	Spro_3488	-322	4.7	TACCCCTTTAGGGGGA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1898	-111	4.4	TACCTCTAAAGGGTGA
Edwardsiella tarda EIB202	ETAE_1114	-156	3.9	TAACCCAAAAGAGGAA

Position: -99 Score: 3.7 Sequence: TAACCAATAAATGGTA Locus tag: t1149
	t1149	-99	3.7	TAACCAATAAATGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaR
Ortholog function: Conserved hypothetical protein
Salmonella typhimurium LT2	STM1271	-99	3.7	TAACCAATAAATGGTA

Position: -98 Score: 5 Sequence: TACTCCCAAAGGGGTA Locus tag: t1420
	t1420	-98	5	TACTCCCAAAGGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ynfE
Ortholog function: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
Escherichia coli str. K-12 substr. MG1655	b1587	-92	4.7	TAACCCAAAATGGGTA
Salmonella typhimurium LT2	STM1499	-95	5	TACTCCCAAAGGGGTA
Citrobacter koseri ATCC BAA-895	CKO_01581	-93	4.8	TACCTATAAGGGGTTA
		-20	3.8	TAACTATAATGGAGTG
Serratia proteamaculans 568	Spro_1687	-143	4.3	TACCCACTTCTGAGTA

Position: -55 Score: 4.7 Sequence: TACTTCATTGTGGGTA Locus tag: t1644
	t1644	-55	4.7	TACTTCATTGTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Escherichia coli str. K-12 substr. MG1655	b1256	-55	4.5	TACTCCAATGTAGGTA
Salmonella typhimurium LT2	STM1732	-55	4.7	TACTTCATTGTGGGTA
Citrobacter koseri ATCC BAA-895	CKO_01333	-55	4.5	TACTCCATTGTAGGTA
Yersinia pestis KIM	y2044	-43	4.7	TACTCATTTGTAGGTA
Serratia proteamaculans 568	Spro_2674	-28	4.5	TACCCGTAAGTAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2303	-56	4.9	TACCTACTTAGGGGTA
Edwardsiella tarda EIB202	ETAE_1528	-52	3.7	TCACTCAATATGGTTA
Proteus mirabilis HI4320	PMI1350	-59	4.9	TACTTATTAATGGGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu2478	-55	3.8	TTCTAATATATGAGTA

Position: -216 Score: 4.6 Sequence: TACTCAGAAGTGAGTA Locus tag: t1660
	t1660	-216	4.6	TACTCAGAAGTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655	b1241	-215	4.7	TACCCAGAAGTGAGTA
Salmonella typhimurium LT2	STM1749	-216	4.6	TACTCAGAAGTGAGTA
Citrobacter koseri ATCC BAA-895	CKO_01318	-216	4.6	TACTCAGAAGTGAGTA
Yersinia pestis KIM	y2023	-260	4	TACCTAAGAATAGTTA
Serratia proteamaculans 568	Spro_2704	-252	4	TACCCAAGAGTAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2326	-289	4	CACCCACAAATAGGTA
Edwardsiella tarda EIB202	ETAE_1508	-239	4.4	TACCCAAGAATGAGTA

Position: -159 Score: 4.3 Sequence: TCCTCCAAAAGGAGTA Locus tag: t1673
	t1673	-159	4.3	TCCTCCAAAAGGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4)
Escherichia coli str. K-12 substr. MG1655	b1224	-158	4.3	TTATCCTAAAGGGGTA
Salmonella typhimurium LT2	STM1764	-159	4.3	TCCTCCCAAAGGAGTA
Citrobacter koseri ATCC BAA-895	CKO_01301	-158	4.6	TCCTCCTTAAGGGGTA

Position: -236 Score: 4.2 Sequence: TACCTATAACGAGTTA Locus tag: t1674
	t1674	-236	4.2	TACCTATAACGAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Escherichia coli str. K-12 substr. MG1655	b1223	-236	4.1	TACCCGGAAAGAGTTA
Salmonella typhimurium LT2	STM1765	-236	4.2	TACCTATAACGAGTTA
		-126	4	TACTCATTAAGGGTAA
Citrobacter koseri ATCC BAA-895	CKO_01299	-392	4.2	TACCTATAACGAGTTA
		-282	4.5	TACTCACTAAGGGGCA

Position: -229 Score: 4.3 Sequence: TTACCCTTAATGAGTA Position: -119 Score: 4.5 Sequence: TAACTCGTTATAGGTA Locus tag: t1676
	t1676	-229	4.3	TTACCCTTAATGAGTA
		-119	4.5	TAACTCGTTATAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narX
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655	b1222	-228	4	TTACCCATAGTGAGTA
		-118	3.8	TAACTCTTTCCGGGTA
Salmonella typhimurium LT2	STM1766	-230	4.3	TTACCCTTAATGAGTA
		-120	4.5	TAACTCGTTATAGGTA
Citrobacter koseri ATCC BAA-895	CKO_01297	-249	4.4	TGCCCCTTAGTGAGTA
		-139	4.5	TAACTCGTTATAGGTA
Serratia proteamaculans 568	Spro_2899	-138	4.7	TACTTCGTTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2029	-217	4.2	CACTCCTTAATGAGTA
		-106	4.7	TACTCACTAGTGGGTA
Proteus mirabilis HI4320	PMI3569	-73	4.5	TACTCCCTTTGGAGTA

Position: -161 Score: 4.6 Sequence: TACCCTATTAGGGGTA Locus tag: t1970
	t1970	-161	4.6	TACCCTATTAGGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dmsA
Ortholog function: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
Escherichia coli str. K-12 substr. MG1655	b0894	-180	3.4	TACCGAACAATAATTA
Salmonella typhimurium LT2	STM0964	-161	4.6	TACCCTATTAGGGGTA
Citrobacter koseri ATCC BAA-895	CKO_02177	-166	5.2	TACCCCTTTGGGGGTA

Position: -143 Score: 4.5 Sequence: TACCTCTCTGGCGGTA Locus tag: t1996
	t1996	-143	4.5	TACCTCTCTGGCGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Citrobacter koseri ATCC BAA-895	CKO_02206	-109	4.3	TACCTCCCTGGCGGTA

Position: -91 Score: 4.2 Sequence: TAATCGTTAATGGGTA Locus tag: t2106
	t2106	-91	4.2	TAATCGTTAATGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: modA
Ortholog function: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Escherichia coli str. K-12 substr. MG1655	b0763	-90	3.9	TACCTCACAAAGGTTA
Salmonella typhimurium LT2	STM0781	-91	4.2	TAATCGTTAATGGGTA
Citrobacter koseri ATCC BAA-895	CKO_02372	-90	4	TAACCTCAATTGGGTA

Position: -48 Score: 4.3 Sequence: TTCCCATAATTGGGTA Locus tag: t3245
	t3245	-48	4.3	TTCCCATAATTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcB
Ortholog function: Aerobic respiration control sensor protein arcB (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655	b3210	-112	4.6	TACCTCCAACGGAGTA
Salmonella typhimurium LT2	STM3328	-48	4.3	TTCCCATAATTGGGTA
Citrobacter koseri ATCC BAA-895	CKO_04614	-49	3.8	TGCTCAGAATTGAGTA

Position: -30 Score: 4.5 Sequence: TACCTCGAAGTGAGCA Locus tag: t3647
	t3647	-30	4.5	TACCTCGAAGTGAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase maturation
Escherichia coli str. K-12 substr. MG1655	b3739	-31	4.6	TACCTCGAAGGGAGCA
Salmonella typhimurium LT2	STM3872	-30	4.5	TACCTCGAAGTGAGCA
Citrobacter koseri ATCC BAA-895	CKO_00079	-30	4.6	TACCTCGAAGGGAGCA
Serratia proteamaculans 568	Spro_0001	-33	4.6	TACCTCCTCAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4519	-33	4.3	TACCTCTGAAAAGGTA
Edwardsiella tarda EIB202	ETAE_3526	-156	4.4	TACCTCCTGGGGGGTA

Position: -101 Score: 5 Sequence: TACCCATTAAGAGGTA Locus tag: t4031
	t4031	-101	5	TACCCATTAAGAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: Nitrite reductase large subunit (EC 1.7.1.4)
Escherichia coli str. K-12 substr. MG1655	b3365	-101	5.1	TACCCATTAAGGAGTA
Salmonella typhimurium LT2	STM3474	-101	5	TACCCATTAAGAGGTA
Citrobacter koseri ATCC BAA-895	CKO_04789	-101	5.2	TACCTCTTAAGGAGTA
Yersinia pestis KIM	y3945	-100	4.5	TACCACCTTAGAGGTA
Serratia proteamaculans 568	Spro_4595	-197	4.5	TACTCCCGAATGGGTA
		-101	4.5	TACCACATTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4079	-100	4.8	TACCCACAAAGAAGTA
Proteus mirabilis HI4320	PMI1479	-134	4.1	TACTACTTTGGTAGTA

Position: -100 Score: 4.7 Sequence: TACCCATAAAGGAGCA Locus tag: t4395
	t4395	-100	4.7	TACCCATAAAGGAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frdA
Ortholog function: Fumarate reductase subunit A (EC 1.3.5.4)
Escherichia coli str. K-12 substr. MG1655	b4154	-101	4.7	TACCTATAAAGGAGCA
Salmonella typhimurium LT2	STM4343	-100	4.7	TACCCATAAAGGAGCA
Citrobacter koseri ATCC BAA-895	CKO_03678	-60	4.7	TACCTATAAAGGAGCA

Position: -78 Score: 3.9 Sequence: CACCCCGAAAGAGTTA Locus tag: t4452
	t4452	-78	3.9	CACCCCGAAAGAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN
Escherichia coli str. K-12 substr. MG1655	b4209	-79	3.7	TGCTACGTAAGGGTTA
Salmonella typhimurium LT2	STM4399	-78	3.9	CACCCCGAAAGAGTTA
Citrobacter koseri ATCC BAA-895	CKO_03623	-78	3.9	TGACCCGAAAGGGTTA
Yersinia pestis KIM	y0652	-108	4.4	TACCCACTTGGAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3606	-81	4.8	TACCTCGTAAGCGGTA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NarP regulog to Salmonella enterica subsp. enterica serovar Typhi Ty2

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --