Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PaaX regulog to Providencia rettgeri DSM 1131

Reference regulog properties
Source regulog: PaaX - Enterobacteriales
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Providencia rettgeri DSM 1131
Orthologous TF(s) PROVRETT_01507
Regulated genes 2
Built upon 12 sites [see more]
Predicted regulatory interactions in Providencia rettgeri DSM 1131
Locus tag Position Score Sequence
Position: -331
Score: 8.4
Sequence: TGATTC-(27)-GAATCA
Locus tag: PROVRETT_01495
PROVRETT_01495 -331 8.4 TGATTC-(27)-GAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaZ
Ortholog function: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Escherichia coli str. K-12 substr. MG1655 b1387 -271 7.4 CGATTC-(27)-GAATCA
-54 7.4 TGATTC-(28)-GAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01468 -273 8.4 TGATTC-(27)-GAATCA
-56 6.5 TGATTC-(28)-GTAACA
Serratia proteamaculans 568 Spro_3071 -305 8.4 TGATTC-(28)-GAATCA
-51 5.6 TGATAC-(28)-GAATTC
Position: -43
Score: 8.4
Sequence: TGATTC-(27)-GAATCA
Locus tag: PROVRETT_01496
PROVRETT_01496 -43 8.4 TGATTC-(27)-GAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaA
Ortholog function: Phenylacetic acid degradation protein paaA
Escherichia coli str. K-12 substr. MG1655 b1388 -270 7.4 TGTTTC-(28)-GAATCA
-52 8 TGATTC-(27)-GAATCG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01469 -270 6.5 TGTTAC-(28)-GAATCA
-52 8.4 TGATTC-(27)-GAATCA
Serratia proteamaculans 568 Spro_3072 -307 5.5 GAATTC-(28)-GTATCA
-53 8.4 TGATTC-(28)-GAATCA