Propagation of SiaR regulog to Providencia rettgeri DSM 1131
| Source regulog: | SiaR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Sialic acid utilization |
| Effector: | Glucosamine-6-phosphate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Providencia rettgeri DSM 1131 |
| Orthologous TF(s) | PROVRETT_03767 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -55
Score: 5.2 Sequence: TATAGAGTAAAACTCCATA
Locus tag: PROVRETT_03766
|
||||
| PROVRETT_03766 | -55 | 5.2 | TATAGAGTAAAACTCCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanA | ||||
| Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3) | ||||
| Yersinia pestis KIM | y1458 | -46 | 5.9 | AATGGAGTTAAACTTCATT |
| Edwardsiella tarda EIB202 | ETAE_0928 | -61 | 5 | AATGGAGCCAAACTCCATA |
| Proteus mirabilis HI4320 | PMI2973 | -59 | 5.4 | TATAGAGTTAAACTCCATA |
| -29 | 4.8 | AAAGAAATTAATCTCCATA | ||
|
Position: -68
Score: 4.6 Sequence: TGAGGAATTTAGCTTCATA
Position: -38
Score: 5.5 Sequence: ATTGGAGTTATACTTCAAA
Locus tag: PROVRETT_03771
|
||||
| PROVRETT_03771 | -68 | 4.6 | TGAGGAATTTAGCTTCATA | |
| -38 | 5.5 | ATTGGAGTTATACTTCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanE | ||||
| Ortholog function: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) | ||||
| Salmonella typhimurium LT2 | STM1129 | -37 | 4.9 | AACGGAGCAAAACTTCAAA |
| Yersinia pestis KIM | y1459 | -46 | 5.9 | AATGGAGTTAAACTTCATT |
| Edwardsiella tarda EIB202 | ETAE_0521 | -70 | 5.1 | GATGGAGTATTGCTCCATA |
| -40 | 4.3 | TATGGAGTTCAATTCTAAA | ||
| Proteus mirabilis HI4320 | PMI2978 | -71 | 4.5 | TGAGAAATAAAACTCCGTA |
| -41 | 4.5 | TTCGGAGTTACATTTCAAA | ||
|
Position: -88
Score: 5.4 Sequence: TTTGAAGTTACACTTCATT
Locus tag: PROVRETT_03773
|
||||
| PROVRETT_03773 | -88 | 5.4 | TTTGAAGTTACACTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanM | ||||
| Ortholog function: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase | ||||
| Salmonella typhimurium LT2 | STM1130 | -32 | 5 | GATGAAGCTTTACTCCAAT |
| Edwardsiella tarda EIB202 | ETAE_0932 | -128 | 5.2 | ATTGAAGTGTAACTCCAAA |
| -98 | 4.5 | AATGGAGCAATACTACAAC | ||