Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HexR regulog to Providencia rettgeri DSM 1131

Reference regulog properties
Source regulog: HexR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Providencia rettgeri DSM 1131
Orthologous TF(s) PROVRETT_02789
Regulated genes 3
Built upon 45 sites [see more]
Predicted regulatory interactions in Providencia rettgeri DSM 1131
Locus tag Position Score Sequence
Position: -204
Score: 5.2
Sequence: CTGTAATTAAATTTCAG
Position: -91
Score: 5
Sequence: CTGAAATTTTGTTACAG
Locus tag: PROVRETT_01796
PROVRETT_01796 -204 5.2 CTGTAATTAAATTTCAG
-91 5 CTGAAATTTTGTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppc
Ortholog function: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Serratia proteamaculans 568 Spro_4783 -166 4.8 GCGTAATTAAATTTCAG
-51 5 GTGAAATTTACTTACAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0187 -174 5.2 TTGTAATTAAATTTCAC
-43 5 GTGAAATAAACTTACAA
Edwardsiella tarda EIB202 ETAE_3484 -151 4.8 GCGTAATTAAATTTCAG
Proteus mirabilis HI4320 PMI3227 -205 4.9 CCGTAATTAAATTTCAG
-89 4.7 ATGAAAATTAATTACAC
Position: -235
Score: 4.8
Sequence: ATGTAATAAAAATACGG
Locus tag: PROVRETT_03513
PROVRETT_03513 -235 4.8 ATGTAATAAAAATACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybfA
Ortholog function: Putative exported protein
Escherichia coli str. K-12 substr. MG1655 b0699 -164 5.6 GTGTAACTTAATTACAG
Salmonella typhimurium LT2 STM0708 -187 4.8 TTGTAACTAATTTACGC
Citrobacter koseri ATCC BAA-895 CKO_02461 -61 5.7 ATGTAACTTAATTACAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00718 -159 4.6 TCGTAACTAATTTACGT
Enterobacter sp. 638 Ent638_1211 -161 5.4 TCGTAACTTAATTACAG
Yersinia pestis KIM y1267 -60 5 ACGTAACAAAATTACGA
Serratia proteamaculans 568 Spro_1250 -188 5.2 GTGTAACAAAATTACGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1344 -176 4.8 TTGTAACTTAATGACGT
Proteus mirabilis HI4320 PMI0555 -130 5 GTGAAATTTAATTACAC
Photorhabdus luminescens subsp. laumondii TTO1 plu1423 -165 5.8 ATGTAATAAAATTACAT
© 2009-2020 RegPrecise