Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GlpR regulog to Providencia rettgeri DSM 1131

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Providencia rettgeri DSM 1131
Orthologous TF(s) PROVRETT_01481
Regulated genes 4
Built upon 64 sites [see more]
Predicted regulatory interactions in Providencia rettgeri DSM 1131
Locus tag Position Score Sequence
Position: -51
Score: 5
Sequence: TGAGCGAAAACGAACA
Locus tag: PROVRETT_01483
PROVRETT_01483 -51 5 TGAGCGAAAACGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA
Position: -99
Score: 4.6
Sequence: TGTTCTTTAACGATAA
Locus tag: PROVRETT_01783
PROVRETT_01783 -99 4.6 TGTTCTTTAACGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator protein
Proteus mirabilis HI4320 PMI3211 -86 4.7 CGCTCATTAACGATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4767 -97 4.6 CGCGCATTAACGATAA
Position: -66
Score: 3.9
Sequence: TGGGCTATATCAAAAA
Locus tag: PROVRETT_04008
PROVRETT_04008 -66 3.9 TGGGCTATATCAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpQ
Ortholog function: glycerophosphoryl diester phosphodiesterase
Escherichia coli str. K-12 substr. MG1655 b2239 -218 3.9 TGTTTGATTTCGCGCA
-166 3.7 TGCGTCATTTTGAACA
Salmonella typhimurium LT2 STM2282 -219 3.9 TGTTTGATTTCGCGCA
Citrobacter koseri ATCC BAA-895 CKO_00538 -210 4.2 CGCGCATAATCGCTCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02645 -217 4.3 TGTTTGATTTCGAGCA
Serratia proteamaculans 568 Spro_0198 -108 4.8 CGCTCGTTATGGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4167 -52 4.5 CGTTCGTAATAGAACA
Edwardsiella tarda EIB202 ETAE_3117 -153 4.6 CGCTCGAAAATGAAAA
Proteus mirabilis HI4320 PMI3590 -28 4.1 TGTACGAAAATGAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4120 -109 4.3 TTTTCGTTATGGAAAA
Position: -112
Score: 4.7
Sequence: TGTTCCTTATCAAACA
Locus tag: PROVRETT_04010
PROVRETT_04010 -112 4.7 TGTTCCTTATCAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: anaerobic glycerol-3-phosphate dehydrogenase subunit A
Escherichia coli str. K-12 substr. MG1655 b2241 -70 5 TGCGCGAAATCAAACA
Salmonella typhimurium LT2 STM2284 -69 5 TGCGCGAAATCAAACA
Citrobacter koseri ATCC BAA-895 CKO_00536 -69 5 TGCGCGAAATCAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -70 5.1 TGCTCGAAATCAAACA
Enterobacter sp. 638 Ent638_2805 -68 5 TGTTCGAAATCAAACA
Yersinia pestis KIM y0404 -90 4.3 TGTTTCTTATCAATCA
Serratia proteamaculans 568 Spro_0200 -73 4.7 TGTTCCTTATCAAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -83 4.7 TGCTCTTTATCAAACA
Edwardsiella tarda EIB202 ETAE_3115 -77 4.8 TGCTCCTTATCAAACA
Proteus mirabilis HI4320 PMI3592 -106 4.9 TGCTCATTATCAAACA
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