Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Providencia rettgeri DSM 1131

Reference regulog properties
Source regulog: FadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Providencia rettgeri DSM 1131
Orthologous TF(s) PROVRETT_02195
Regulated genes 9
Built upon 130 sites [see more]
Predicted regulatory interactions in Providencia rettgeri DSM 1131
Locus tag Position Score Sequence
Position: -50
Score: 4.4
Sequence: CACTGATCCGATGAGTA
Locus tag: PROVRETT_00011
PROVRETT_00011 -50 4.4 CACTGATCCGATGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: iclR
Ortholog function: Acetate operon transcriptional repressor, IclR family
Photorhabdus luminescens subsp. laumondii TTO1 plu4392 -86 3.2 CACACATCGGATGAGTG
Position: -89
Score: 3.7
Sequence: CCCTGATCGGACTTGTT
Error

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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