Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NarP regulog to Providencia rettgeri DSM 1131

Reference regulog properties
Source regulog: NarP - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Providencia rettgeri DSM 1131
Orthologous TF(s) PROVRETT_02328
Regulated genes 15
Built upon 125 sites [see more]
Predicted regulatory interactions in Providencia rettgeri DSM 1131
Locus tag Position Score Sequence
Position: -86
Score: 4.5
Sequence: TACCTATAAATTAGTA
Locus tag: PROVRETT_02150
PROVRETT_02150 -86 4.5 TACCTATAAATTAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Escherichia coli str. K-12 substr. MG1655 b1256 -55 4.5 TACTCCAATGTAGGTA
Salmonella typhimurium LT2 STM1732 -55 4.7 TACTTCATTGTGGGTA
Citrobacter koseri ATCC BAA-895 CKO_01333 -55 4.5 TACTCCATTGTAGGTA
Yersinia pestis KIM y2044 -43 4.7 TACTCATTTGTAGGTA
Serratia proteamaculans 568 Spro_2674 -28 4.5 TACCCGTAAGTAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2303 -56 4.9 TACCTACTTAGGGGTA
Edwardsiella tarda EIB202 ETAE_1528 -52 3.7 TCACTCAATATGGTTA
Proteus mirabilis HI4320 PMI1350 -59 4.9 TACTTATTAATGGGTA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -55 3.8 TTCTAATATATGAGTA
Position: -149
Score: 4
Sequence: TACTACCAAAGTAGTA
Locus tag: PROVRETT_04660
PROVRETT_04660 -149 4 TACTACCAAAGTAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narX
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655 b1222 -228 4 TTACCCATAGTGAGTA
-118 3.8 TAACTCTTTCCGGGTA
Salmonella typhimurium LT2 STM1766 -230 4.3 TTACCCTTAATGAGTA
-120 4.5 TAACTCGTTATAGGTA
Citrobacter koseri ATCC BAA-895 CKO_01297 -249 4.4 TGCCCCTTAGTGAGTA
-139 4.5 TAACTCGTTATAGGTA
Serratia proteamaculans 568 Spro_2899 -138 4.7 TACTTCGTTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2029 -217 4.2 CACTCCTTAATGAGTA
-106 4.7 TACTCACTAGTGGGTA
Proteus mirabilis HI4320 PMI3569 -73 4.5 TACTCCCTTTGGAGTA
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