Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BirA regulog to Escherichia coli B

Reference regulog properties
Source regulog: BirA - Enterobacteriales
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli B
Orthologous TF(s) EcolBDRAFT_2574
Regulated genes 1
Built upon 27 sites [see more]
Predicted regulatory interactions in Escherichia coli B
Locus tag Position Score Sequence
Position: -79
Score: 9.4
Sequence: TTGTAAACC-(16)-GGTTTACAA
Locus tag: EcolBDRAFT_2579
EcolBDRAFT_2579 -79 9.4 TTGTAAACC-(16)-GGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: Biotin synthase (EC 2.8.1.6)
Escherichia coli str. K-12 substr. MG1655 b0775 -79 9.4 TTGTAAACC-(16)-GGTTTACAA
Salmonella typhimurium LT2 STM0794 -79 9.1 TTGTAAACC-(16)-GGTTTACGA
Citrobacter koseri ATCC BAA-895 CKO_02353 -79 9.1 TTGTAAACC-(16)-GGTTTACGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00800 -230 9.4 TTGTAAACC-(16)-GGTTTACAA
Enterobacter sp. 638 Ent638_1266 -79 8.7 TTGTAAACC-(16)-GGTTTACCA
Erwinia amylovora ATCC 49946 EAM_1210 -80 9 TTGTAAACC-(15)-AGTTTACAA
Yersinia pestis KIM y3031 -89 9 TTGTAAACC-(16)-GGTTGACAG
Serratia proteamaculans 568 Spro_1311 -88 9 TTGTAAACC-(16)-GGTTgACAg
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2825 -86 8.7 TCGTAAACC-(16)-GGTTGACAG
Edwardsiella tarda EIB202 ETAE_2554 -94 8.8 CTGTAAACC-(16)-GGTTGACAT
Proteus mirabilis HI4320 PMI0603 -85 8.4 ATGTAAACC-(16)-AGTTGACAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1485 -86 8.4 ACGTAAACC-(15)-GGTTGACAG
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