Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraC regulog to Escherichia albertii TW07627

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Escherichia albertii TW07627
Orthologous TF(s) ESCAB7627_3196
Regulated genes 2
Built upon 56 sites [see more]
Predicted regulatory interactions in Escherichia albertii TW07627
Locus tag Position Score Sequence
Position: -187
Score: 8.2
Sequence: AAGCAGGAAAATCCATA-(4)-TAGCTGCATTATTCATA
Locus tag: ESCAB7627_4208
ESCAB7627_4208 -187 8.2 AAGCAGGAAAATCCATA-(4)-TAGCTGCATTATTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytfQ
Ortholog function: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Citrobacter koseri ATCC BAA-895 CKO_03603 -189 7.5 TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA
Enterobacter sp. 638 Ent638_0412 -189 7.3 TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Escherichia coli str. K-12 substr. MG1655 b4227 -188 7.8 GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04622 -324 7.4 TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA
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