Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of UxuR regulog to Escherichia albertii TW07627

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia albertii TW07627
Orthologous TF(s) ESCAB7627_3356
Regulated genes 5
Built upon 44 sites [see more]
Predicted regulatory interactions in Escherichia albertii TW07627
Locus tag Position Score Sequence
Position: -47
Score: 4.7
Sequence: AAAGTGGTATAACAAATA
Locus tag: ESCAB7627_0629
ESCAB7627_0629 -47 4.7 AAAGTGGTATAACAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuR
Ortholog function: exu regulon transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3094 -47 4.7 AAAGTGGTATAACAAATA
Yersinia pestis KIM y3602 -105 4.5 TAAGTGGTATAACAAATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0643 -98 4.5 TAAGTGGTATAACAAATC
Edwardsiella tarda EIB202 ETAE_0434 -68 4.2 AAAGTGGTATAACAACTC
Position: -17
Score: 3.9
Sequence: TTATTGGACAAGCAAAAA
Locus tag: ESCAB7627_0819
ESCAB7627_0819 -17 3.9 TTATTGGACAAGCAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjN
Ortholog function: L-galactonate oxidoreductase
Escherichia coli str. K-12 substr. MG1655 b4358 -183 3.8 GACCTGGTTAATCACATT
Salmonella typhimurium LT2 STM3082 -34 4.4 GAATTGGTAAACAAAACA
Position: -228
Score: 5.4
Sequence: TATTTGGTTGACCAGTTT
Locus tag: ESCAB7627_3356
ESCAB7627_3356 -228 5.4 TATTTGGTTGACCAGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
Position: -285
Score: 4.8
Sequence: AAATTGGTCAACCATTGT
Position: -179
Score: 5
Sequence: GGTATGGTTAACCAATTT
Locus tag: ESCAB7627_3358
ESCAB7627_3358 -285 4.8 AAATTGGTCAACCATTGT
-179 5 GGTATGGTTAACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -180 5.4 GATGTGGTTAACCAATTT
Salmonella typhimurium LT2 STM3135 -336 5.6 AAATTGGTTGACCAATCA
-149 5.2 GATTTGGTTAGCCAATTT
Yersinia pestis KIM y2902 -510 4.5 AAgTTGtTagACCAgTTT
-352 4 AAATTGGTaAgtCcAaTa
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1093 -109 5.2 TAATTGGTCAATCAATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0170 -77 5.7 TTTTTGGTTGACCAATTT
Position: -71
Score: 5.6
Sequence: ACAATGGTTGACCAATTT
Locus tag: ESCAB7627_3359
ESCAB7627_3359 -71 5.6 ACAATGGTTGACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntP
Ortholog function: Fructuronate transporter GntP
Escherichia coli str. K-12 substr. MG1655 b4321 -177 5.4 AAATTGGTTAACCACATC
-71 5.6 ACAATGGTTGACCAATTT
Yersinia pestis KIM y3426 -226 5.2 AACTTGGTTAACCAATAC
Edwardsiella tarda EIB202 ETAE_1036 -70 5.1 TTATTGGTCAACCAAAAA
-29 5.8 AAATTGGTTGACCAAATG
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