Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AllR regulog to Salmonella enterica subsp. enterica serovar Typhi str. E02-1180

Reference regulog properties
Source regulog: AllR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: Allantoin utilization
Effector: Allantoin
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. E02-1180
Orthologous TF(s) SentesTyphi_010100021510
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. E02-1180
Locus tag Position Score Sequence
Position: -37
Score: 6.4
Sequence: TTGGAAACTTTTTCCAA
Locus tag: SentesTyphi_010100021505
SentesTyphi_010100021505 -37 6.4 TTGGAAACTTTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcl
Ortholog function: glyoxylate carboligase
Escherichia coli str. K-12 substr. MG1655 b0507 -37 6.7 TTGGAAAAATTTTCCAA
Salmonella typhimurium LT2 STM0517 -37 6.4 TTGGAAACTTTTTCCAA
Position: -122
Score: 6.6
Sequence: TTGGAATATTTTTCCAA
Locus tag: SentesTyphi_010100021525
SentesTyphi_010100021525 -122 6.6 TTGGAATATTTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allS
Ortholog function: DNA-binding transcriptional activator of the allD operon
Escherichia coli str. K-12 substr. MG1655 b0504 -124 6.6 TTGGAATATTTTTCCAA
Salmonella typhimurium LT2 STM0514 -122 6.6 TTGGAATATTTTTCCAA