Propagation of LsrR regulog to Escherichia coli O103:H2 str. 12009
| Source regulog: | LsrR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | SorC |
| Regulation mode: | repressor |
| Biological process: | Quorum sensing; Biofilm formation |
| Effector: | 4,5-dihydroxypentan-2,3-dione |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Escherichia coli O103:H2 str. 12009 |
| Orthologous TF(s) | ECO103_1642 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -216
Score: 6.6 Sequence: GAACAAATGTATTTCTGCTTTTAATTTGTTC
Position: -48
Score: 6.7 Sequence: GAACAATTGCATTAAAGATTTAAATATGTTC
Locus tag: ECO103_1642
|
||||
| ECO103_1642 | -216 | 6.6 | GAACAAATGTATTTCTGCTTTTAATTTGTTC | |
| -48 | 6.7 | GAACAATTGCATTAAAGATTTAAATATGTTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lsrR | ||||
| Ortholog function: Quorum sensing transcriptional repgulator of LsrR, SorC family | ||||
| Enterobacter sp. 638 | Ent638_3537 | -201 | 6.6 | GAACAAATGATTTTTTGATTTAATAATGTTC |
| -35 | 6 | GAACATATGATCTAAATTTTTATAAGAGTTC | ||
| Escherichia coli str. K-12 substr. MG1655 | b1512 | -216 | 6.6 | GAACAAATGTATTTCTGCTTTTAATTTGTTC |
| -48 | 6.7 | GAACAATTGCATTAAAGATTTAAATATGTTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03508 | -203 | 6.7 | GAACAAATGATTTTTAAATTTAATAATGTTC |
| -36 | 6 | GAACATATGATCTAAATTTTTATAAGAGTTC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3142 | -184 | 6.8 | GAACATTTATCTATTTAAAAAACAATTGTTC |
| Salmonella typhimurium LT2 | STM4073 | -219 | 6.6 | GAACAAATGTTTTTTGAAAAAGAAATTGTTC |
| -53 | 6.5 | GAACAATTGTGTTAATGATTTAGAAATGTTC | ||
|
Position: -231
Score: 6.7 Sequence: GAACATATTTAAATCTTTAATGCAATTGTTC
Position: -63
Score: 6.6 Sequence: GAACAAATTAAAAGCAGAAATACATTTGTTC
Locus tag: ECO103_1643
|
||||
| ECO103_1643 | -231 | 6.7 | GAACATATTTAAATCTTTAATGCAATTGTTC | |
| -63 | 6.6 | GAACAAATTAAAAGCAGAAATACATTTGTTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lsrA | ||||
| Ortholog function: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component | ||||
| Enterobacter sp. 638 | Ent638_3536 | -212 | 6 | GAACTCTTATAAAAATTTAGATCATATGTTC |
| -46 | 6.6 | GAACATTATTAAATCAAAAAATCATTTGTTC | ||
| Escherichia coli str. K-12 substr. MG1655 | b1513 | -231 | 6.7 | GAACATATTTAAATCTTTAATGCAATTGTTC |
| -63 | 6.6 | GAACAAATTAAAAGCAGAAATACATTTGTTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03507 | -210 | 6 | GAACTCTTATAAAAATTTAGATCATATGTTC |
| -43 | 6.7 | GAACATTATTAAATTTAAAAATCATTTGTTC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3143 | -72 | 6.8 | GAACAATTGTTTTTTAAATAGATAAATGTTC |
| Salmonella typhimurium LT2 | STM4074 | -233 | 6.5 | GAACATTTCTAAATCATTAACACAATTGTTC |
| -67 | 6.6 | GAACAATTTCTTTTTCAAAAAACATTTGTTC | ||
| Yersinia pestis KIM | y3769 | 2 | 6.6 | GAACACTTTTAAATTAAAAATATTTTTGTTC |