Propagation of FadR regulog to Escherichia coli O103:H2 str. 12009
| Source regulog: | FadR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Escherichia coli O103:H2 str. 12009 |
| Orthologous TF(s) | ECO103_1289 |
| Regulated genes | 10 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -38
Score: 4.5 Sequence: AAGTGGTCAGACCTCCT
Locus tag: ECO103_0237
|
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| ECO103_0237 | -38 | 4.5 | AAGTGGTCAGACCTCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadE | ||||
| Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0221 | -38 | 4.5 | AAGTGGTCAGACCTCCT |
| Salmonella typhimurium LT2 | STM0309 | -39 | 4.5 | AAGTGGTCAGACCTCCT |
| Citrobacter koseri ATCC BAA-895 | CKO_02965 | -39 | 4.5 | AAGTGGTCAGACCTCCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00235 | -40 | 4.5 | AAGTGGTCAGACCTCCT |
| Enterobacter sp. 638 | Ent638_0758 | -39 | 4.5 | AAGTGGTCAGACCTCCT |
| Erwinia amylovora ATCC 49946 | EAM_0890 | -38 | 5.1 | AACAGGTCCGACCACTT |
| Yersinia pestis KIM | y0946 | -36 | 4.7 | AACAGGTCAGACCTCCT |
| Serratia proteamaculans 568 | Spro_0949 | -35 | 5.1 | AACAGGTCAGACCTCTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3474 | -129 | 5.1 | AACAGGTCAGACCTCTT |
| Proteus mirabilis HI4320 | PMI0348 | -44 | 4.6 | AACAGGTCTGACCTCTG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1192 | -57 | 4.6 | AACAGGTCCGACCTCTG |
|
Position: -59
Score: 4.5 Sequence: AAGAGGTCATACCAGTT
Locus tag: ECO103_0420
|
||||
| ECO103_0420 | -59 | 4.5 | AAGAGGTCATACCAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadM | ||||
| Ortholog function: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0443 | -59 | 4.5 | AAGAGGTCATACCAGTT |
| Salmonella typhimurium LT2 | STM0454 | -70 | 3.9 | TAGAGGTCATACCAGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02717 | -59 | 4.4 | ATGAGGTCATACCAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00405 | -54 | 4.3 | AAGTGGTGTGACCTCTT |
| Enterobacter sp. 638 | Ent638_0910 | -58 | 4.1 | AAGAGGTCATACCAGTC |
| Yersinia pestis KIM | y1033 | -49 | 3.8 | TTGAGGTCCTACCAGTT |
| Serratia proteamaculans 568 | Spro_1101 | -97 | 4.3 | TACAGGTCTTACCAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1154 | -44 | 4.4 | ATCAGGTCGTACCAGTT |
|
Position: -89
Score: 4.4 Sequence: AGCTGGTATGATGAGTT
Locus tag: ECO103_1994
|
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| ECO103_1994 | -89 | 4.4 | AGCTGGTATGATGAGTT | |
| Supported by regulated orthologs from reference regulons | ||||