Propagation of FadR regulog to Salmonella enterica subsp. enterica serovar Typhi str. E00-7866
| Source regulog: | FadR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Typhi str. E00-7866 |
| Orthologous TF(s) | Salmoneentericaenterica_010100012203 |
| Regulated genes | 10 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -85
Score: 4.6 Sequence: CACTCATCCGATCAGTT
Locus tag: Salmoneentericaenterica_010100002218
|
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| Salmoneentericaenterica_010100002218 | -85 | 4.6 | CACTCATCCGATCAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iclR | ||||
| Ortholog function: Acetate operon transcriptional repressor, IclR family | ||||
| Salmonella typhimurium LT2 | STM4187 | -85 | 4.6 | CACTCATCCGATCAGTT |
|
Position: -46
Score: 4.9 Sequence: AACTCATCCGACCACAT
Locus tag: Salmoneentericaenterica_010100009790
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| Salmoneentericaenterica_010100009790 | -46 | 4.9 | AACTCATCCGACCACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadH | ||||
| Ortholog function: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3081 | -46 | 4.9 | AACTCATCCGACCACAT |
| Salmonella typhimurium LT2 | STM3219 | -46 | 4.9 | AACTCATCCGACCACAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04487 | -46 | 4.9 | AACTCATCCGACCACAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03510 | -44 | 4.9 | AACTCATCCGACCACAT |
| Enterobacter sp. 638 | Ent638_3539 | -44 | 4.9 | AACTCATCCGACCACAT |
| Erwinia amylovora ATCC 49946 | EAM_0507 | -31 | 5 | AACTCATCCGACCACTT |
| Yersinia pestis KIM | y3589 | -57 | 4.9 | ATCTCATCCGACCACTT |
| Serratia proteamaculans 568 | Spro_4309 | -61 | 4.9 | ATCTCATCCGACCACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0655 | -36 | 4.4 | GACTCATCAGACCAGTT |
| Proteus mirabilis HI4320 | PMI3702 | -32 | 4.7 | ATCTCATCTGACCAGTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3990 | -89 | 4.7 | CACTCATCCGACCACTT |
|
Position: -70
Score: 3.9 Sequence: TAGAGGTCATACCAGTT
Locus tag: Salmoneentericaenterica_010100012318
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| Salmoneentericaenterica_010100012318 | -70 | 3.9 | TAGAGGTCATACCAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadM | ||||
| Ortholog function: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0443 | -59 | 4.5 | AAGAGGTCATACCAGTT |
| Salmonella typhimurium LT2 | STM0454 | -70 | 3.9 | TAGAGGTCATACCAGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02717 | -59 | 4.4 | ATGAGGTCATACCAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00405 | -54 | 4.3 | AAGTGGTGTGACCTCTT |
| Enterobacter sp. 638 | Ent638_0910 | -58 | 4.1 | AAGAGGTCATACCAGTC |
| Yersinia pestis KIM | y1033 | -49 | 3.8 | TTGAGGTCCTACCAGTT |
| Serratia proteamaculans 568 | Spro_1101 | -97 | 4.3 | TACAGGTCTTACCAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1154 | -44 | 4.4 | ATCAGGTCGTACCAGTT |
|
Position: -42
Score: 4.8 Sequence: ATCAGGTCAGACCACTA
Locus tag: Salmoneentericaenterica_010100013188
|
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| Salmoneentericaenterica_010100013188 | -42 | 4.8 | ATCAGGTCAGACCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadI | ||||
| Ortholog function: FadI component of anaerobic fatty acid oxidation complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2342 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Salmonella typhimurium LT2 | STM2389 | -42 | 4.8 | ATCAGGTCAGACCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00448 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02724 | -44 | 5.1 | ATCAGGTCAGACCACTT |
| Enterobacter sp. 638 | Ent638_2882 | -48 | 5.1 | ATCAGGTCAGACCACTT |
| Yersinia pestis KIM | y1579 | -66 | 5 | ATCAGGTCAGACCTGTT |
| Serratia proteamaculans 568 | Spro_3379 | -56 | 5 | ATCAGGTCAGACCTCTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3079 | -53 | 5 | ATCAGGTCTGACCTGTT |
| Proteus mirabilis HI4320 | PMI1808 | -50 | 5 | ATCAGGTCAGACCTCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3201 | -81 | 4.7 | ATCAGGTCAGACCTGTC |
|
Position: -40
Score: 4.3 Sequence: AACTGGTCGTACCACAA
Locus tag: Salmoneentericaenterica_010100015477
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| Salmoneentericaenterica_010100015477 | -40 | 4.3 | AACTGGTCGTACCACAA | |
| Supported by regulated orthologs from reference regulons | ||||