Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of UxuR regulog to Salmonella enterica subsp. enterica serovar Typhi str. E00-7866

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. E00-7866
Orthologous TF(s) Salmoneentericaenterica_010100020728
Regulated genes 3
Built upon 44 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. E00-7866
Locus tag Position Score Sequence
Position: -336
Score: 5.6
Sequence: AAATTGGTTGACCAATCA
Position: -149
Score: 4.5
Sequence: GATTTGGCTAGCCAATTT
Locus tag: Salmoneentericaenterica_010100015330
Salmoneentericaenterica_010100015330 -336 5.6 AAATTGGTTGACCAATCA
-149 4.5 GATTTGGCTAGCCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -180 5.4 GATGTGGTTAACCAATTT
Salmonella typhimurium LT2 STM3135 -336 5.6 AAATTGGTTGACCAATCA
-149 5.2 GATTTGGTTAGCCAATTT
Yersinia pestis KIM y2902 -510 4.5 AAgTTGtTagACCAgTTT
-352 4 AAATTGGTaAgtCcAaTa
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1093 -109 5.2 TAATTGGTCAATCAATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0170 -77 5.7 TTTTTGGTTGACCAATTT
Position: -86
Score: 5.3
Sequence: TGATTGGTCAACCAATTT
Locus tag: Salmoneentericaenterica_010100015335
Salmoneentericaenterica_010100015335 -86 5.3 TGATTGGTCAACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuT2
Ortholog function: D-glucuronate transporter
Salmonella typhimurium LT2 STM3134 -273 5.2 AAATTGGCTAACCAAATC
-86 5.3 TGATTGGTCAACCAATTT
Position: -231
Score: 5.9
Sequence: ATATTGGTAAACCAATAT
Locus tag: Salmoneentericaenterica_010100020728
Salmoneentericaenterica_010100020728 -231 5.9 ATATTGGTAAACCAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
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