Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR/GalS regulog to Salmonella enterica subsp. enterica serovar Typhi str. 404ty

Reference regulog properties
Source regulog: GalR/GalS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Galactose utilization
Effector: Galactose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Orthologous TF(s) Salmonelentericaenterica_010100020881, Salmonelentericaenterica_010100045235, Salmonelentericaenterica_010100023563, Salmonelentericaenterica_010100031495, Salmonelentericaenterica_010100045230
Regulated genes 3
Built upon 78 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Locus tag Position Score Sequence
Position: -281
Score: 6.3
Sequence: TAGTGTAAACGATTACACCA
Locus tag: Salmonelentericaenterica_010100019426
Salmonelentericaenterica_010100019426 -281 6.3 TAGTGTAAACGATTACACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: galactose transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -282 5 AACTGAAACCGATTACACCA
-100 6.2 TAGTGTAAGCGATTACACTG
Salmonella typhimurium LT2 STM3091 -283 4.7 TCATGAAAGCGGTTACATTC
-101 6.1 CAGTGTAAACGATTACACCA
Citrobacter koseri ATCC BAA-895 CKO_04318 -282 5.2 TAATGAAACCGTTTACCCTC
-101 6.6 TAGTGTAAACGATTACACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -285 4.7 AAATGAAAGCGATTACATAG
-102 5.6 TTGTGGAAACGATTACACAG
Enterobacter sp. 638 Ent638_3347 -284 5 AAATGAAAGCGATTACACCA
-102 6.3 TAGTGTAACCGATTACACCA
Erwinia amylovora ATCC 49946 EAM_2827 -170 5.6 TGTTGTAACCGGTTACATTC
Serratia proteamaculans 568 Spro_1160 -274 4.3 GTGTGATATCGGTTACATTT
-100 6.1 TTGTGTAATCGTTTCCACTA
Edwardsiella tarda EIB202 ETAE_2966 -273 5.6 AAGTGAAAACGATTACATTT
-79 6 GTATGTAAACGATTACATTT
Position: -96
Score: 6.2
Sequence: GCGTGTAAACGATTCCACTA
Locus tag: Salmonelentericaenterica_010100038640
Salmonelentericaenterica_010100038640 -96 6.2 GCGTGTAAACGATTCCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galE
Ortholog function: UDP-galactose-4-epimerase
Escherichia coli str. K-12 substr. MG1655 b0759 -96 6.6 TTGTGTAAACGATTCCACTA
Salmonella typhimurium LT2 STM0776 -96 6.4 GTGTGTAAACGATTCCACTA
Citrobacter koseri ATCC BAA-895 CKO_02376 -54 6.4 AAGTGTAAACGATTCCACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00773 -252 4.9 CAGTGGAGACGGTTACACTT
-96 6.4 AAGTGTAAACGATTCCACTA
Enterobacter sp. 638 Ent638_1250 -96 6.2 CGGTGTAACCGATTCCACTA
Yersinia pestis KIM y3043 -95 6.4 GAGTGTAAACGATTCCATTA
Edwardsiella tarda EIB202 ETAE_2564 -195 5.5 TAGTGTAAGCGATACCACAA
-95 6.4 TAGTGTAAACGATTCCATTT
Position: -33
Score: 5.3
Sequence: TAATGTAAGCGTTTACCCAC
Locus tag: Salmonelentericaenterica_010100045230
Salmonelentericaenterica_010100045230 -33 5.3 TAATGTAAGCGTTTACCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: galactose operon repressor galR
Escherichia coli str. K-12 substr. MG1655 b2837 -32 5.2 GAATGTAAGCGTTTACCCAC
Salmonella typhimurium LT2 STM3011 -33 5.3 TAATGTAAGCGTTTACCCAC
Citrobacter koseri ATCC BAA-895 CKO_04211 -33 5.1 AAATGTAAGCGTTTACCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03246 -33 5.5 GTATGTAAACGCTTACCCTA
Enterobacter sp. 638 Ent638_3278 -35 5.3 GTGTGTAAACGCTTACCCCC
Erwinia amylovora ATCC 49946 EAM_2770 -35 4.9 AAATGTAAACGCTTACCCAG
Yersinia pestis KIM y3183 32 5.4 TGATGTAAGCGGTTACCCTA
Serratia proteamaculans 568 Spro_3832 -34 5.2 GAATGTAAGCGATTACCCAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3172 -240 5.3 AAGTGTAATCGGTTACCCTA
Edwardsiella tarda EIB202 ETAE_2890 -41 5.2 TGGTGTAAACGTTTACGGTT