Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FruR regulog to Salmonella enterica subsp. enterica serovar Typhi str. 404ty

Reference regulog properties
Source regulog: FruR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: activator (repressor)
Biological process: Central carbohydrate metabolism
Effector: Fructose-1-phosphate; Fructose-1,6-diphosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Orthologous TF(s) Salmonelentericaenterica_010100042833, Salmonelentericaenterica_010100002990
Regulated genes 17
Built upon 213 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Locus tag Position Score Sequence
Position: 2
Score: 3.6
Sequence: GCTGGCACGTTTTAAA
Locus tag: Salmonelentericaenterica_010100000781
Salmonelentericaenterica_010100000781 2 3.6 GCTGGCACGTTTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaD
Ortholog function: Aldose 1-epimerase family protein YeaD
Escherichia coli str. K-12 substr. MG1655 b1780 -87 3.7 ATTGACACGATTCCGC
Citrobacter koseri ATCC BAA-895 CKO_01801 -87 3.7 ATTGACACGATTCCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01196 -87 3.7 ATTGACACGATTCCGC
Enterobacter sp. 638 Ent638_1674 -87 3.7 ATTGACACGATTCCGC
Erwinia amylovora ATCC 49946 EAM_1932 -78 3.7 ATTGACACGATTCCGC
Serratia proteamaculans 568 Spro_2729 -87 3.7 ATTGACACGATTCCGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2345 -93 3.7 ATTGACACGATTCCGC
Edwardsiella tarda EIB202 ETAE_1482 -87 3.7 ATTGACACGATTCCGC
Proteus mirabilis HI4320 PMI1505 -88 3.7 ATTGACACGATTCCGC
Position: -221
Score: 4.9
Sequence: CTTGAATGGTTTCAGC
Locus tag: Salmonelentericaenterica_010100001441
Salmonelentericaenterica_010100001441 -221 4.9 CTTGAATGGTTTCAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pykF
Ortholog function: Pyruvate kinase (EC 2.7.1.40)
Escherichia coli str. K-12 substr. MG1655 b1676 -221 4.9 CTTGAATGGTTTCAGC
Salmonella typhimurium LT2 STM1378 -221 4.9 CTTGAATGGTTTCAGC
Citrobacter koseri ATCC BAA-895 CKO_01709 -221 4.9 CTTGAATGGTTTCAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02133 -221 4.9 CTTGAATGGTTTCAGC
Enterobacter sp. 638 Ent638_1768 -221 5 GGTGAATGGTTTCAGC
Erwinia amylovora ATCC 49946 EAM_1657 -226 4.6 TTTGAATGGTTTCAGC
Yersinia pestis KIM y1944 -258 5.1 GTTGAATGGTTTCAGC
Serratia proteamaculans 568 Spro_2187 -239 5.1 GTTGAATGGTTTCAGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1867 -241 4.7 ATTGAATGGTTTCAGC
Edwardsiella tarda EIB202 ETAE_1850 -230 5.1 GTTGAATGGTTTCAGC
Proteus mirabilis HI4320 PMI1405 -269 5 GTTGAAAGGTTTCAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2613 -344 5.1 GTTGAATGGTTTCAGC
Position: -137
Score: 5.4
Sequence: GCTGAAGCGTTTCAGT
Locus tag: Salmonelentericaenterica_010100003575
Salmonelentericaenterica_010100003575 -137 5.4 GCTGAAGCGTTTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: epd
Ortholog function: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
Escherichia coli str. K-12 substr. MG1655 b2927 -137 5.4 GCTGAAGCGTTTCAGT
Salmonella typhimurium LT2 STM3070 -137 5.4 GCTGAAGCGTTTCAGT
Citrobacter koseri ATCC BAA-895 CKO_04297 -137 5.4 GCTGAAGCGTTTCAGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03356 -137 5.4 GCTGAAGCGTTTCAGT
Enterobacter sp. 638 Ent638_3340 -139 5.4 GCTGAAGCGTTTCAGT
Erwinia amylovora ATCC 49946 EAM_2813 -131 5.4 GCTGAAGCGTTTCAGT
Yersinia pestis KIM y3309 -161 5.4 GCTGAAGCGTTTCAGT
Serratia proteamaculans 568 Spro_3946 -211 5.4 GCTGAAGCGTTTCAGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3913 -119 5.4 GCTGAAGCGTTTCAGT
Edwardsiella tarda EIB202 ETAE_2958 -136 5.4 GCTGAAGCGTTTCAGT
Proteus mirabilis HI4320 PMI0241 -135 5.1 GCTGAACCGTTTCAGT
Photorhabdus luminescens subsp. laumondii TTO1 plu0955 -139 5.2 GCTGAATCGTTTCATT
Position: -281
Score: 3.6
Sequence: ACGGACACGATTCAAC
Position: -69
Score: 4
Sequence: CCTGAATCGATGTGGC
Locus tag: Salmonelentericaenterica_010100008968
Salmonelentericaenterica_010100008968 -281 3.6 ACGGACACGATTCAAC
-69 4 CCTGAATCGATGTGGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoA
Ortholog function: NADH dehydrogenase I chain A
Escherichia coli str. K-12 substr. MG1655 b2288 -283 3.6 ACGGACACGATTCAAC
Salmonella typhimurium LT2 STM2328 -283 3.6 ACGGACACGATTCAAC
Citrobacter koseri ATCC BAA-895 CKO_00508 -283 3.6 ACGGACACGATTCAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02678 -375 3.6 aCgGAcaCGATTCAaC
Enterobacter sp. 638 Ent638_2832 -283 3.6 ACGGACACGATTCAAC
Erwinia amylovora ATCC 49946 EAM_2292 -257 4.4 ACTGACTCGATTTAGC
Yersinia pestis KIM y1630 -257 4.4 ACTGACTCGATTTAGC
Serratia proteamaculans 568 Spro_3308 -263 4.3 ACTGACACGATTTAGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3028 -258 4.4 ACTGACTCGATTTAGC
Edwardsiella tarda EIB202 ETAE_2385 -135 4.7 GCTGGAGCGATTCGGC
Proteus mirabilis HI4320 PMI1762 -244 4.3 aCTGAcaCGTTTtAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu3089 -254 4.3 ACTGACACGTTTTAGC
Position: -66
Score: 4.1
Sequence: ATTTTATCGATTCAGC
Locus tag: Salmonelentericaenterica_010100010995
Salmonelentericaenterica_010100010995 -66 4.1 ATTTTATCGATTCAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmM
Ortholog function: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Escherichia coli str. K-12 substr. MG1655 b3612 -64 4.1 ATTTTATCGATTCAGC
Salmonella typhimurium LT2 STM3704 -66 4.1 ATTTTATCGATTCAGC
Citrobacter koseri ATCC BAA-895 CKO_05070 -87 4.1 ATTTTATCGATTCAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03956 -86 4.6 ATTTAAACGATTCAGC
Enterobacter sp. 638 Ent638_0123 -66 4.3 ACTTTATCGATTCAGC
Position: -265
Score: 4.6
Sequence: GCTGAAAGGTGTCAGC
Locus tag: Salmonelentericaenterica_010100013277
Salmonelentericaenterica_010100013277 -265 4.6 GCTGAAAGGTGTCAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -264 4.6 GCTGAAAGGTGTCAGC
Salmonella typhimurium LT2 STM1749 -265 4.6 GCTGAAAGGTGTCAGC
Citrobacter koseri ATCC BAA-895 CKO_01318 -265 4.6 GCTGAAAGGTGTCAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -260 4.5 GCTGAAAGGTATCAGC
Enterobacter sp. 638 Ent638_2304 -276 4.5 GCTGAAAGGTATCAGC
Erwinia amylovora ATCC 49946 EAM_1900 -246 4.6 GCTGAATGGTATCAGC
Yersinia pestis KIM y2023 -309 4.7 GCTGAATGGTGTCAGC
Serratia proteamaculans 568 Spro_2704 -301 4.7 GCTGAATGGTGTCAGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -338 4.7 GCTGAATGGTGTCAGC
Edwardsiella tarda EIB202 ETAE_1508 -288 4.7 GCTGAATGGTGTCAGC
Proteus mirabilis HI4320 PMI1486 -269 4.6 GCTGAAAGGTGTCAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -162 4.5 GCTGAAAGGAATCAGC
Position: -287
Score: 4.3
Sequence: GGTGAATCGATATTGT
Locus tag: Salmonelentericaenterica_010100016072
Salmonelentericaenterica_010100016072 -287 4.3 GGTGAATCGATATTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pckA
Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b3403 -286 4.3 GGTGAATCGATACTTT
Salmonella typhimurium LT2 STM3500 -287 4.3 GGTGAATCGATATTGT
Citrobacter koseri ATCC BAA-895 CKO_04825 -287 4 GGTGAATCGATATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03773 -286 4.5 GTTGAATCGATTTTCC
Serratia proteamaculans 568 Spro_2098 -151 4.1 GCTGAATCCGGTCAGC
Proteus mirabilis HI4320 PMI3015 -209 4.3 ACTGATTCGATTTAGC
Position: -217
Score: 3.7
Sequence: ATTGACACGATTCCGC
Locus tag: Salmonelentericaenterica_010100033239
Salmonelentericaenterica_010100033239 -217 3.7 ATTGACACGATTCCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapA
Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Escherichia coli str. K-12 substr. MG1655 b1779 -87 3.7 ATTGACACGATTCCGC
Salmonella typhimurium LT2 STM1290 -87 3.7 ATTGACACGATTCCGC
Citrobacter koseri ATCC BAA-895 CKO_01800 -87 3.7 ATTGACACGATTCCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01197 -87 3.7 ATTGACACGATTCCGC
Enterobacter sp. 638 Ent638_1675 -87 3.7 ATTGACACGATTCCGC
Erwinia amylovora ATCC 49946 EAM_1931 -78 3.7 ATTGACACGATTCCGC
Yersinia pestis KIM y2165 -78 3.7 ATTGACACGATTCCGC
Serratia proteamaculans 568 Spro_2728 -87 3.7 ATTGACACGATTCCGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2344 -93 3.7 ATTGACACGATTCCGC
Edwardsiella tarda EIB202 ETAE_1483 -87 3.7 ATTGACACGATTCCGC
Proteus mirabilis HI4320 PMI1504 -88 3.7 ATTGACACGATTCCGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2558 -88 3.7 ATTGACACGATTCCGC
Position: -253
Score: 4.5
Sequence: GTTGAATCGGTTCAGA
Locus tag: Salmonelentericaenterica_010100034169
Salmonelentericaenterica_010100034169 -253 4.5 GTTGAATCGGTTCAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Transcriptional repressor for pyruvate dehydrogenase, GntR family
Escherichia coli str. K-12 substr. MG1655 b0113 -251 4.2 AGTGAATCGGTTCAAT
Salmonella typhimurium LT2 STM0151 -253 4.5 GTTGAATCGGTTCAGA
Citrobacter koseri ATCC BAA-895 CKO_03260 -253 4.5 GTTGAATCGGTTCAGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00117 -251 4.5 GTTGAATCGGTTCAGA
Enterobacter sp. 638 Ent638_0659 -252 4.4 GGTGAATCGGTTCAGA
Erwinia amylovora ATCC 49946 EAM_0746 -213 4.2 GCTGGCTGGTTTCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3790 -254 4.1 ATTTAAACGGTTCAGC
Position: -124
Score: 4.1
Sequence: AGTTGAACGATTCAGT
Locus tag: Salmonelentericaenterica_010100039410
Salmonelentericaenterica_010100039410 -124 4.1 AGTTGAACGATTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: mannitol-specific PTS system, IIABC components
Escherichia coli str. K-12 substr. MG1655 b3599 -123 4 AGTTAACCGATTCAGT
Salmonella typhimurium LT2 STM3685 -124 4.1 AGTTGAACGATTCAGT
Citrobacter koseri ATCC BAA-895 CKO_05054 -120 4.1 AGTTGAACGATTCAGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03942 -125 3.7 AGCTAAACGATTCAGT
Enterobacter sp. 638 Ent638_0136 -122 3.7 AGTTGAACGATTCGGT
Serratia proteamaculans 568 Spro_0072 -64 4 GCTGGATCGTAACAAC
Position: -122
Score: 5.1
Sequence: CCTGAATCAATTCAGC
Position: -75
Score: 3.9
Sequence: GTTGGATCGTTTCGAA
Locus tag: Salmonelentericaenterica_010100040250
Salmonelentericaenterica_010100040250 -122 5.1 CCTGAATCAATTCAGC
-75 3.9 GTTGGATCGTTTCGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfkA
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11)
Escherichia coli str. K-12 substr. MG1655 b3916 -121 5.1 CCTGAATCAATTCAGC
Salmonella typhimurium LT2 STM4062 -122 5.1 CCTGAATCAATTCAGC
Citrobacter koseri ATCC BAA-895 CKO_03085 -128 5.1 CCTGAATCAATTCAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04223 -119 5.1 CCTGAATCAATTCAGC
Enterobacter sp. 638 Ent638_4056 -170 5.1 CCTGAATCAATTCAGC
Erwinia amylovora ATCC 49946 EAM_0103 -128 3.9 CCTCAACCAATTCAGC
Yersinia pestis KIM y0059 -144 4.9 CTTGAATCAATTCAGC
Serratia proteamaculans 568 Spro_4807 -141 4.9 CTTGAATCAATTCAGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4307 -136 5.1 CCTGAATCAATTCAGC
Edwardsiella tarda EIB202 ETAE_3450 -219 5.1 CCTGAATCAATTCAGC
Proteus mirabilis HI4320 PMI3203 -119 5.1 GTTGAATCAATTCAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu4774 -141 5.1 GTTGAATCAATTCAGC
Position: -208
Score: 4.1
Sequence: GCTGAACCGATTTCGC
Locus tag: Salmonelentericaenterica_010100044860
Salmonelentericaenterica_010100044860 -208 4.1 GCTGAACCGATTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppc
Ortholog function: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Escherichia coli str. K-12 substr. MG1655 b3956 -146 4.4 GCTGAAGCGATTTCGC
Salmonella typhimurium LT2 STM4119 -209 4.1 GCTGAACCGATTTCGC
Citrobacter koseri ATCC BAA-895 CKO_03038 -166 4.1 GCTGAACCGATTTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04245 -109 4.4 GCTGAAGCGATTTCGC
Enterobacter sp. 638 Ent638_4030 -126 4.1 GCTGAACCGTTTTCGC
Position: -47
Score: 4.6
Sequence: GCTGAATCGTTAAGGT
Locus tag: Salmonelentericaenterica_010100048991
Salmonelentericaenterica_010100048991 -47 4.6 GCTGAATCGTTAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Escherichia coli str. K-12 substr. MG1655 b3365 -47 4.6 GCTGAATCGTTAAGGT
Salmonella typhimurium LT2 STM3474 -47 4.6 GCTGAATCGTTAAGGT
Citrobacter koseri ATCC BAA-895 CKO_04789 -47 4.6 GCTGAATCGTTAAGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03752 -47 4.6 GCTGAATCGTTAAGGT
Enterobacter sp. 638 Ent638_3793 -47 4.6 GCTGAATCGTTAAGGT
Yersinia pestis KIM y3945 -168 4.4 GCTGATACCTTTCAGC
Serratia proteamaculans 568 Spro_4595 -169 4.3 ACTGGCTCGTTTCAGC
Proteus mirabilis HI4320 PMI1479 -93 4.7 GCTGAATTGATTAAGC
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