Propagation of Crp regulog to Salmonella enterica subsp. enterica serovar Typhi str. 404ty
| Source regulog: | Crp - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Typhi str. 404ty |
| Orthologous TF(s) | Salmonelentericaenterica_010100047997, Salmonelentericaenterica_010100025013 |
| Regulated genes | 173 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -108
Score: 4.2 Sequence: ATTTGTGATCGTCGCCGCGTTT
Locus tag: Salmonelentericaenterica_010100000185
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| Salmonelentericaenterica_010100000185 | -108 | 4.2 | ATTTGTGATCGTCGCCGCGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treB | ||||
| Ortholog function: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4240 | -101 | 3.8 | AATTGTGATCTTCGCTGCGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03571 | -156 | 3.8 | ATTTGTGATCTTCGCTGCGTTT |
| Enterobacter sp. 638 | Ent638_0439 | -106 | 4 | TATTGTGATCTTCACCCGATTT |
| Serratia proteamaculans 568 | Spro_0529 | -124 | 3.8 | TTTTGTGATCCTCGCCCCAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3288 | -127 | 4.3 | CAATGTGATCTTCAACCCATTT |
|
Position: -103
Score: 5.3 Sequence: AAATGTGACTAATATCACATTA
Locus tag: Salmonelentericaenterica_010100001011
|
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| Salmonelentericaenterica_010100001011 | -103 | 5.3 | AAATGTGACTAATATCACATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: b1963 | ||||
| Ortholog function: orf, hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1963 | -287 | 4.6 | TGGTGTGATCAGGCGCACATTA |
| Salmonella typhimurium LT2 | STM1994 | -70 | 5.5 | AAATGTGATTAATATCACATTA |
| -34 | 4.4 | TCATATGACTTACATCACAAAA | ||
|
Position: -164
Score: 4 Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -104
Score: 3.6 Sequence: AGATGTTAGTTATCTATCAATT
Locus tag: Salmonelentericaenterica_010100001576
|
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| Salmonelentericaenterica_010100001576 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA | |
| -104 | 3.6 | AGATGTTAGTTATCTATCAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpS | ||||
| Ortholog function: ATP-dependent Clp protease adaptor protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0881 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| Salmonella typhimurium LT2 | STM0944 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -104 | 3.6 | AGATGTTAGTTATCTATCAATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02199 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -135 | 4.2 | TAATGTGACAGATGTCGCGGAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00914 | -167 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -77 | 4.3 | ATTTGTGATGAGCATAACCTCT | ||
| Enterobacter sp. 638 | Ent638_1398 | -161 | 3.9 | ATTTTTGAAGCAGTTAACGCTA |
| -132 | 3.8 | GAATGTGACAGATATCGCGGAT | ||
| Erwinia amylovora ATCC 49946 | EAM_1320 | -161 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -132 | 4.5 | TTTTGTGATAGAGGTCGCTATT | ||
| Serratia proteamaculans 568 | Spro_1673 | -176 | 3.6 | AAGTTTGAAGCAGGTAACGCTA |
| Edwardsiella tarda EIB202 | ETAE_2208 | -164 | 3.8 | AAGTTTGAGGCAGTTAACGCAA |
| -144 | 3.6 | AATTGTGCGGCAGTGCGCTTTT | ||
| Proteus mirabilis HI4320 | PMI0689 | -268 | 3.7 | TGTCTTTATTTACTTAACATTA |
| -148 | 4.1 | AACTTTGATGTAGCTAACGCTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1593 | -170 | 4.3 | AAGTTTGATATAGATAACGATA |
|
Position: -102
Score: 4.1 Sequence: GATTGCGAGGTTGCTCACAAAA
Locus tag: Salmonelentericaenterica_010100001731
|
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| Salmonelentericaenterica_010100001731 | -102 | 4.1 | GATTGCGAGGTTGCTCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sbmC | ||||
| Ortholog function: DNA gyrase inhibitor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2009 | -93 | 3.5 | GAGTGCGAGTCTGCTCGCATAA |
| Salmonella typhimurium LT2 | STM2061 | -102 | 4.1 | GATTGCGAGGTTGCTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00775 | -219 | 3.5 | GAGTGCGAGTCTGCTCACATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02467 | -88 | 3.6 | CTCTGTGAATTCGCGCACATAC |
| Enterobacter sp. 638 | Ent638_2577 | -97 | 3.6 | TCGTGCGAGTCTGCTCGCATAA |
| -65 | 3.6 | ATATTTGCTGCACATAAAGAAT | ||
|
Position: -237
Score: 4.9 Sequence: TATGGTGACGTGCTTCACATAT
Locus tag: Salmonelentericaenterica_010100002076
|
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| Salmonelentericaenterica_010100002076 | -237 | 4.9 | TATGGTGACGTGCTTCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycgB | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1188 | -235 | 4.4 | TATGGTGAGCTGGCTCACATCT |
| Salmonella typhimurium LT2 | STM1804.S | -243 | 4.9 | TATGGTGACGTGCTTCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02310 | -174 | 4 | TATGGTGACTTAACTCACAGCA |
| Enterobacter sp. 638 | Ent638_2364 | -236 | 4.2 | TATGGTGACTTACCTCACACCT |
|
Position: -300
Score: 4.2 Sequence: TATCGTGACCTGTGTCACTGTT
Locus tag: Salmonelentericaenterica_010100002697
|
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| Salmonelentericaenterica_010100002697 | -300 | 4.2 | TATCGTGACCTGTGTCACTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit | ||||
| Enterobacter sp. 638 | Ent638_1222 | -295 | 4.2 | TATCGTGACTGTGATCACTGTT |
| Erwinia amylovora ATCC 49946 | EAM_1168 | -249 | 4.4 | AAGTGTGATTTTTGTCACTGTT |
| -190 | 3.6 | TAATGAGATTGTGATCCACTTA | ||
| Yersinia pestis KIM | y3071 | -254 | 4.5 | AATCGTGATCCTAATCACTGTT |
| Serratia proteamaculans 568 | Spro_1263 | -253 | 4.3 | ATCCGTGATCTAAATCACTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1357 | -265 | 4.7 | ATTCGTGATCTAAATCACTGTT |
| Edwardsiella tarda EIB202 | ETAE_2588 | -261 | 3.7 | ATGCGTGACCGTTGTCACTGTT |
| Proteus mirabilis HI4320 | PMI0565 | -264 | 4.3 | AAAAGTGATCCCTCTCACTGTT |
|
Position: -213
Score: 5 Sequence: AAATGTGATGCAGGTCAGATAA
Locus tag: Salmonelentericaenterica_010100003575
|
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| Salmonelentericaenterica_010100003575 | -213 | 5 | AAATGTGATGCAGGTCAGATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epd | ||||
| Ortholog function: D-erythrose 4-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2927 | -213 | 4.7 | AAGTGTGATGTGAGTCAGATAA |
| Salmonella typhimurium LT2 | STM3070 | -213 | 5 | AAATGTGATGCAGGTCAGATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04297 | -213 | 4.8 | AAGTGTGATGCAGGTCAGATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03356 | -213 | 4.8 | AAATGTGATGTGAGTCATATAG |
| Enterobacter sp. 638 | Ent638_3340 | -215 | 4.5 | AAATGTGACGCAAGTCATATAG |
| Erwinia amylovora ATCC 49946 | EAM_2813 | -208 | 4.1 | TTTTGTGACGCAGATCGAAAGT |
| Yersinia pestis KIM | y3309 | -216 | 3.7 | AATTGTGCCCTTTTTCAGGGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3913 | -194 | 4.1 | TTTTATGACGCAGGTCACTCTT |
| Edwardsiella tarda EIB202 | ETAE_2958 | -233 | 4.9 | AATTGTGATGCAATGCACGTTT |
| Proteus mirabilis HI4320 | PMI0241 | -253 | 4.4 | AAATGTTAACAAGAGCACATTT |
|
Position: -37
Score: 3.6 Sequence: AAAATTGATTTATTGCATCTAT
Locus tag: Salmonelentericaenterica_010100003907
|
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| Salmonelentericaenterica_010100003907 | -37 | 3.6 | AAAATTGATTTATTGCATCTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfeR | ||||
| Ortholog function: transcriptional regulator, LysR family | ||||
| Salmonella typhimurium LT2 | STM2424 | -37 | 3.6 | AAAATTGATTTATTGCATCTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00385 | -37 | 3.6 | AAAATTGATTTATTGCATCTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02755 | -112 | 3.6 | AAAATTGATTTATTGCATCTAT |
| Erwinia amylovora ATCC 49946 | EAM_2384 | -33 | 3.7 | TTAATTTATTGAATTCATATAT |
| Serratia proteamaculans 568 | Spro_3441 | -33 | 3.6 | TTGATTTATTTAATTCATATAT |
|
Position: -153
Score: 4 Sequence: TAAAATGAACCATATCGCAAAA
Position: -123
Score: 4.2 Sequence: ATATTAGATGGAAATCACATAG
Locus tag: Salmonelentericaenterica_010100005167
|
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| Salmonelentericaenterica_010100005167 | -153 | 4 | TAAAATGAACCATATCGCAAAA | |
| -123 | 4.2 | ATATTAGATGGAAATCACATAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dsdX | ||||
| Ortholog function: DsdX permease | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2365 | -154 | 4.4 | TAAAGTGAACCATATCTCAATT |
| Salmonella typhimurium LT2 | STM3801 | -153 | 4 | TAAAATGAACCATATCGCAAAA |
| -123 | 4.2 | ATATTAGATGGAAATCACATAG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00020 | -124 | 4 | TTATTGGATGCAAATCACCCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04080 | -152 | 4.3 | TAATTTGACCCATAGCATATTT |
| -122 | 3.7 | CTTTTAGAGCTAAATCACCTTT | ||
|
Position: -127
Score: 3.8 Sequence: TGATGTAAATTGAATCAACTAT
Position: -109
Score: 4.5 Sequence: CTATGTGATTTCCATCTAATAT
Position: -79
Score: 4.2 Sequence: TTTTGCGATATGGTTCATTTTA
Locus tag: Salmonelentericaenterica_010100005172
|
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| Salmonelentericaenterica_010100005172 | -127 | 3.8 | TGATGTAAATTGAATCAACTAT | |
| -109 | 4.5 | CTATGTGATTTCCATCTAATAT | ||
| -79 | 4.2 | TTTTGCGATATGGTTCATTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dsdC | ||||
| Ortholog function: DNA-binding transcriptional dual regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2364 | -115 | 3.9 | TGGAGTGATTTACATCTAAAAA |
| -85 | 4.6 | AATTGAGATATGGTTCACTTTA | ||
| Salmonella typhimurium LT2 | STM3800 | -142 | 3.8 | TGATGTAAATTGAATCAACTAT |
| -124 | 4.5 | CTATGTGATTTCCATCTAATAT | ||
| -94 | 4.2 | TTTTGCGATATGGTTCATTTTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00019 | -32 | 3.9 | AAGGGTGATTTGCATCCAATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04079 | -125 | 3.9 | AAAGGTGATTTAGCTCTAAAAG |
| -95 | 4.2 | AAATATGCTATGGGTCAAATTA | ||
| Serratia proteamaculans 568 | Spro_2451 | -76 | 3.6 | TTTAGCGACATGGGTCAACTTT |
| Proteus mirabilis HI4320 | PMI0184 | -199 | 3.6 | TATTGTTAAACATATTGAATAT |
| -117 | 4.4 | ATAGGTGATCAGATGCACAAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1968 | -124 | 4.4 | TTCAGTGATACCGATCAAAATT |
| -94 | 4.5 | ATTTGCGATTTAAATCACTAAA | ||
|
Position: -97
Score: 4.7 Sequence: AACAGTGATATAGATCACATAC
Locus tag: Salmonelentericaenterica_010100005197
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| Salmonelentericaenterica_010100005197 | -97 | 4.7 | AACAGTGATATAGATCACATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: maa | ||||
| Ortholog function: maltose O-acetyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0459 | -97 | 4.8 | CTATGTGATCTTTATCACACAG |
| Salmonella typhimurium LT2 | STM0472 | -97 | 4.7 | AACAGTGATATAGATCACATAG |
| Citrobacter koseri ATCC BAA-895 | CKO_02692 | -101 | 4.6 | TCTCGTGATTTAGATCACATCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00440 | -100 | 4.7 | CTTTGTGATAGACATCACATCA |
| Enterobacter sp. 638 | Ent638_0939 | -98 | 4.3 | TGCTGTGACTCTGATCACATCA |
|
Position: -302
Score: 4.3 Sequence: AGGTGTGACACGCCTCGCACTT
Position: -260
Score: 4 Sequence: TATCGTGATGCCCATCACTTCC
Locus tag: Salmonelentericaenterica_010100005232
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| Salmonelentericaenterica_010100005232 | -302 | 4.3 | AGGTGTGACACGCCTCGCACTT | |
| -260 | 4 | TATCGTGATGCCCATCACTTCC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroH | ||||
| Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1704 | -106 | 4.3 | AGGTGTGACACACCTCGCACTT |
| -64 | 4 | TATCGTGATGCGCATCACTTCC | ||
| Salmonella typhimurium LT2 | STM1347 | -106 | 4.3 | AGGTGTGACACGCCTCGCACTT |
| -64 | 4 | TATCGTGATGCCCATCACTTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01728 | -115 | 4.3 | AGGTGTGAAACGCCTCGCATTT |
| -64 | 4.3 | TATTGTGATGCCCATCACTTCC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02162 | -63 | 4 | TATCGTGATGCGCATCACTTCC |
| Enterobacter sp. 638 | Ent638_1743 | -126 | 3.6 | AGTTATGATCGCTTTCACTCTC |
| -62 | 3.6 | TAAGGTGATGCCCATCACTTCC | ||
| Yersinia pestis KIM | y1928 | -64 | 4.3 | TATTGTGATCGCCATCACTTCC |
| Serratia proteamaculans 568 | Spro_2172 | -135 | 3.9 | TTTTGTGCTTTTTTTAGCGATT |
| -64 | 4.3 | TATTGTGATCGCCATCACTTCC | ||
| Edwardsiella tarda EIB202 | ETAE_1792 | -63 | 4 | TATCGTGATCCCCATCACTTCC |
| Proteus mirabilis HI4320 | PMI1423 | -55 | 3.9 | TATTGTGATCTTAATCACTGGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2630 | -62 | 3.8 | TATTGTAATTTCCATTATCTAT |
|
Position: -244
Score: 4.5 Sequence: AAGTTTGACGTTGTTCACAAAG
Locus tag: Salmonelentericaenterica_010100005287
|
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| Salmonelentericaenterica_010100005287 | -244 | 4.5 | AAGTTTGACGTTGTTCACAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompF | ||||
| Ortholog function: Outer membrane protein F precursor | ||||
| Salmonella typhimurium LT2 | STM0999 | -245 | 4.5 | AAGTTTGACGTTGTTCACAAAG |
| Enterobacter sp. 638 | Ent638_1448 | -245 | 4.6 | AAATTTGAGGTGGTTCACAAAG |
|
Position: -142
Score: 4.2 Sequence: TTGTGTGACGCATGCCGCATTT
Locus tag: Salmonelentericaenterica_010100006102
|
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| Salmonelentericaenterica_010100006102 | -142 | 4.2 | TTGTGTGACGCATGCCGCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0907 | -155 | 4.8 | TTGTGTGATGCAAGCCACATTT |
| Salmonella typhimurium LT2 | STM0977 | -142 | 4.2 | TTGTGTGACGCATGCCGCATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02165 | -171 | 4.6 | TTGTGTGACGTAGCGCGCATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00935 | -145 | 3.7 | TTGTGTGACGGCGGCCGCGTTT |
| Enterobacter sp. 638 | Ent638_1427 | -119 | 4.4 | TTGTGTGACGGTGGACACATTT |
| Yersinia pestis KIM | y2784 | -39 | 3.3 | TATAACGATGGCAATCTCAGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2594 | -78 | 3.5 | AAGTATGACGGGTATAAAAATG |
| Proteus mirabilis HI4320 | PMI0711 | -119 | 3.5 | TATTTTTGTGTGCTACACATAA |
|
Position: -122
Score: 4.2 Sequence: ATTTGCGCGCTACGTCACATTT
Position: -85
Score: 3.8 Sequence: TGTTGTGATTACTTTTGAAAAT
Locus tag: Salmonelentericaenterica_010100006549
|
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| Salmonelentericaenterica_010100006549 | -122 | 4.2 | ATTTGCGCGCTACGTCACATTT | |
| -85 | 3.8 | TGTTGTGATTACTTTTGAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ulaA | ||||
| Ortholog function: Ascorbate-specific PTS system, EIIC component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4193 | -124 | 3.8 | ATTTGCGGGTCGCGTCACATTT |
| -87 | 3.8 | TGTTGTGATTACTTTTGAAAAT | ||
| Salmonella typhimurium LT2 | STM4383.S | -122 | 3.9 | ATTTGCGCGCTACGTCACAGTT |
| -85 | 3.8 | TGTTGTGATTACTTTTGAAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03643 | -124 | 3.9 | ATTTGCGTGGTGCGTCACAATT |
| -87 | 3.8 | TGTTGTGATTACTTTTGAAAAT | ||
|
Position: -99
Score: 4.4 Sequence: TACTTTGAGCCGGTTCACACTT
Locus tag: Salmonelentericaenterica_010100006734
|
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| Salmonelentericaenterica_010100006734 | -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deaD | ||||
| Ortholog function: ATP-independent RNA helicase | ||||
| Salmonella typhimurium LT2 | STM3280.S | -154 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04559 | -103 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -48 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03570 | -154 | 3.8 | TTTTTTGCTTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACAT | ||
| Enterobacter sp. 638 | Ent638_3599 | -154 | 4.1 | TCTTATGATTGCCATCACCTTA |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Erwinia amylovora ATCC 49946 | EAM_3065 | -99 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Yersinia pestis KIM | y0696 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Serratia proteamaculans 568 | Spro_0495 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0718 | -96 | 4.4 | CAATTTGAGCCGGTTCACACTT |
| Edwardsiella tarda EIB202 | ETAE_0411 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Proteus mirabilis HI4320 | PMI3424 | -80 | 5 | TAATTTGAGCCAGTTCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4523 | -95 | 5 | TAATTTGAGCCAGTTCACATTT |
|
Position: -2
Score: 4.6 Sequence: AAATGTGCTTCACCTCAAAAAA
Locus tag: Salmonelentericaenterica_010100007136
|
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| Salmonelentericaenterica_010100007136 | -2 | 4.6 | AAATGTGCTTCACCTCAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruB | ||||
| Ortholog function: PTS system, fructose-specific IIA/FPr component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2169 | -178 | 4.3 | AATTGTGCAGCACATCAAACTT |
| Salmonella typhimurium LT2 | STM2206 | -177 | 4.6 | AAATGTGCTTCACCTCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00613 | -50 | 4.1 | AAGTGTGCTTTATCTCTAAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02600 | -177 | 3.5 | AAGTGTGCAGTACCTCTAAGTT |
| Enterobacter sp. 638 | Ent638_2763 | -178 | 4.3 | AAATGTGCTGCACTTCTAAATT |
| Erwinia amylovora ATCC 49946 | EAM_2223 | -179 | 4.4 | AAATGTGCTGGCTGTCAAAAAT |
| Yersinia pestis KIM | y2887 | -178 | 4.1 | AAATGTGCGGAATGTCAAAAAT |
| Serratia proteamaculans 568 | Spro_3230 | -177 | 4 | AAGTGTGCGTGAGGTCAAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2729 | -180 | 4.1 | AAATGTGCGTGATGTCAAAATT |
| Edwardsiella tarda EIB202 | ETAE_2303 | -199 | 4.1 | AAATGTGCTGAAGGTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1992 | -180 | 4.7 | AAATGTGAGTAATCTCAAAAAA |
|
Position: -222
Score: 3.6 Sequence: AAATGTGAGAGAGTGCAACCTG
Locus tag: Salmonelentericaenterica_010100007953
|
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| Salmonelentericaenterica_010100007953 | -222 | 3.6 | AAATGTGAGAGAGTGCAACCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putP | ||||
| Ortholog function: Proline/sodium symporter PutP (TC 2.A.21.2.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1015 | -207 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Salmonella typhimurium LT2 | STM1125 | -204 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Citrobacter koseri ATCC BAA-895 | CKO_02041 | -80 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Enterobacter sp. 638 | Ent638_1542 | -249 | 3.7 | TTTTATGCGGCACTTAACACTT |
| Serratia proteamaculans 568 | Spro_2930 | -211 | 3.9 | AAATGTGACGCAGGGTAAACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4218 | -130 | 3.7 | TTGTGCAACCTTGTTAACAAAT |
| Proteus mirabilis HI4320 | PMI1615 | -220 | 3.8 | TAGTGTGAAGTTACATACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1958 | -243 | 4.4 | AAATGTGATTCAGTAAACGTTT |
|
Position: -128
Score: 3.8 Sequence: GGGTGTTATCTGCCTCACAGTT
Locus tag: Salmonelentericaenterica_010100008333
|
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| Salmonelentericaenterica_010100008333 | -128 | 3.8 | GGGTGTTATCTGCCTCACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araT | ||||
| Ortholog function: putative permease of the Na+:galactoside symporter family | ||||
| Salmonella typhimurium LT2 | STM0149 | -127 | 3.8 | GGGTGTTATCTGCCTCACAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00115 | -171 | 4.7 | CATTGTTATCTGCTTCACACTT |
|
Position: -113
Score: 4.4 Sequence: TTTAGTGAAGCAGATCGCACTA
Locus tag: Salmonelentericaenterica_010100008953
|
||||
| Salmonelentericaenterica_010100008953 | -113 | 4.4 | TTTAGTGAAGCAGATCGCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanA | ||||
| Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3225 | -115 | 4.6 | TTTAGTGAAGCAGATCGCATTA |
| Salmonella typhimurium LT2 | STM3339 | -113 | 4.4 | TTTAGTGAAGCAGATCGCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04629 | -116 | 4.2 | TTTAGTGAAGTAGATCGCACTC |
| Enterobacter sp. 638 | Ent638_3661 | -112 | 4.6 | TTTAGTGAAGCAGATCGCATTA |
| Edwardsiella tarda EIB202 | ETAE_1381 | -141 | 4.5 | TTTAGTGAACTAGATCGCACAA |
|
Position: -134
Score: 3.8 Sequence: AAGCACGATATTGCTCACACTA
Locus tag: Salmonelentericaenterica_010100009038
|
||||
| Salmonelentericaenterica_010100009038 | -134 | 3.8 | AAGCACGATATTGCTCACACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: caiF | ||||
| Ortholog function: transcriptional activator for carnitine metabolism | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0034 | -134 | 3.8 | AAGCAGGATTTAGCTCACACTT |
| Salmonella typhimurium LT2 | STM0068 | -134 | 3.8 | AAGCACGATATTGCTCACACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_03349 | -144 | 3.8 | AAGCACGATTTCGCTCACACTA |
|
Position: -122
Score: 4.3 Sequence: TATTGTTAATCACATCATAAAT
Locus tag: Salmonelentericaenterica_010100010210
|
||||
| Salmonelentericaenterica_010100010210 | -122 | 4.3 | TATTGTTAATCACATCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hpaG | ||||
| Ortholog function: 4-hydroxyphenylacetate catabolism | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04789 | -125 | 4.4 | TTGTGTTAATCCGATCACAAAA |
| Serratia proteamaculans 568 | Spro_0625 | -123 | 5 | TTTTGTTATCACGATCACAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0990 | -159 | 3.7 | AATAATGATAAAAAACAAATTT |
| -129 | 4.9 | TATTGTTACTGAGATCACAATT | ||
|
Position: -6
Score: 4.2 Sequence: AAATGTGTGCGTGATCTCATTA
Locus tag: Salmonelentericaenterica_010100010365
|
||||
| Salmonelentericaenterica_010100010365 | -6 | 4.2 | AAATGTGTGCGTGATCTCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycdZ | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1036 | -52 | 4 | AAATGTGTGCTCGATCTCATTC |
| -50 | 3.7 | ATGTGTGCTCGATCTCATTCAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02033 | -40 | 3.9 | AAATGTGTGCGTGATCTCATTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01059 | -52 | 4.1 | TACTGTGTTTTAGATCGCATTC |
| Serratia proteamaculans 568 | Spro_3290 | -125 | 4.2 | TTTTGTGACAAATTCCACATCT |
| -96 | 3.6 | TATCTTGTTTCTCATTACATAT | ||
| -73 | 4.6 | TTATGTGAAATACATCACATGA | ||
| Edwardsiella tarda EIB202 | ETAE_2360 | -124 | 4.3 | AAGTGTGATTGATGTCACTTTG |
| -72 | 3.6 | CGGTGTGATGTCCATCAATGAA | ||
| Proteus mirabilis HI4320 | PMI3124 | -240 | 3.7 | ATTAATAATATATATCAAACAA |
|
Position: -105
Score: 4.4 Sequence: TGATGTGACGTTAATCACTCTA
Locus tag: Salmonelentericaenterica_010100010525
|
||||
| Salmonelentericaenterica_010100010525 | -105 | 4.4 | TGATGTGACGTTAATCACTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fdrA | ||||
| Ortholog function: membrane protein FdrA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0518 | -213 | 3.8 | TTATTTGATAATCCGCTCACTT |
| -105 | 4.7 | CTGTGTGATATTCATCACCTTA | ||
| Salmonella typhimurium LT2 | STM0529 | -120 | 4.4 | TGATGTGACGTTAATCACTCTA |
| Proteus mirabilis HI4320 | PMI2202 | -191 | 4.2 | AACTGTGACTTTAATCACTCTA |
|
Position: -171
Score: 4.7 Sequence: TTTTGTGATTATAATCACTAAA
Locus tag: Salmonelentericaenterica_010100010550
|
||||
| Salmonelentericaenterica_010100010550 | -171 | 4.7 | TTTTGTGATTATAATCACTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagB | ||||
| Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0678 | -212 | 4.3 | AAATTTAATTCGTATCGCAAAT |
| -178 | 4.6 | TTTTGTGAGTTTTGTCACCAAA | ||
| Salmonella typhimurium LT2 | STM0684 | -205 | 3.7 | AAAATTAATTCGCCTCGCAAAT |
| -171 | 4.7 | TTTTGTGATTATAATCACTAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02486 | -218 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -184 | 5.2 | TTTTGTGATTTGAATCACCAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00699 | -217 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -183 | 5 | TTTTGTGATAATTATCACCAAA | ||
| Enterobacter sp. 638 | Ent638_1193 | -218 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -184 | 4.6 | TTTTGTGAGTTTTGTCACCAAA | ||
| Erwinia amylovora ATCC 49946 | EAM_1147 | -195 | 4.9 | ATATGTGATTAAAGTCACCTTA |
| Yersinia pestis KIM | y1202 | -214 | 5.1 | TTTTGTGATAAATATCACCAAA |
| Serratia proteamaculans 568 | Spro_1227 | -194 | 5.3 | TTTTGTGATTTACATCACCAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1326 | -180 | 5 | TTATGTGATAAAAATCACCAAA |
| Edwardsiella tarda EIB202 | ETAE_2617 | -190 | 5 | ATTTGTGATAACTATCACCAAT |
| Proteus mirabilis HI4320 | PMI0454 | -217 | 4.9 | ATTTGTGATTAAAGTCACCTAT |
|
Position: -97
Score: 3.6 Sequence: TTCAGTGATATCCGTTAAAATT
Locus tag: Salmonelentericaenterica_010100011040
|
||||
| Salmonelentericaenterica_010100011040 | -97 | 3.6 | TTCAGTGATATCCGTTAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjtD | ||||
| Ortholog function: RNA methyltransferase, TrmH family, group 1 | ||||
| Salmonella typhimurium LT2 | STM4600 | -97 | 3.6 | TTCAGTGATATCAGTTAAAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03386 | -222 | 3.7 | AGGTGTGATTCATTCTAAATTA |
| -53 | 4.2 | TATGTTGACATTGGTCACATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04857 | -94 | 4 | TTTAGTGATTTTTGTTGCAAAT |
| Enterobacter sp. 638 | Ent638_0563 | -54 | 4.3 | TATGTTGAGGTGGATCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3892 | -83 | 3.7 | AATCGTGATCGATTACACGTCC |
|
Position: -92
Score: 4.2 Sequence: AAGTGTGATTTTCGTCCCCATA
Locus tag: Salmonelentericaenterica_010100011240
|
||||
| Salmonelentericaenterica_010100011240 | -92 | 4.2 | AAGTGTGATTTTCGTCCCCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybeD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0631 | -94 | 3.6 | AAGTGTAATTTCCGTCCCCATA |
| Salmonella typhimurium LT2 | STM0636 | -93 | 4.2 | AAGTGTGATTTTCGTCCCCATA |
| -35 | 3.9 | AGTTGTTATTTTTTTTACGTAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02527 | -91 | 4.4 | AAGTGTGATTTCCATCCCCATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00663 | -97 | 4.4 | AAGTGTGATTTCCATCCCCATA |
| Enterobacter sp. 638 | Ent638_1166 | -90 | 4.4 | AAGTGTGATTTCCATCCCCATA |
| Yersinia pestis KIM | y1174 | -146 | 4.2 | TATTGTGATTAATCTTATATTG |
|
Position: 8
Score: 3.3 Sequence: CGTCGTGAAAGAGATCAAAGTC
Locus tag: Salmonelentericaenterica_010100011865
|
||||
| Salmonelentericaenterica_010100011865 | 8 | 3.3 | CGTCGTGAAAGAGATCAAAGTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceF | ||||
| Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0115 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0153 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03258 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00119 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0661 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0748 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0768 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4010 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3788 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0660 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2045 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -1
Score: 3.4 Sequence: AATGGCTATCGAAATCAAAGTA
Locus tag: Salmonelentericaenterica_010100011875
|
||||
| Salmonelentericaenterica_010100011875 | -1 | 3.4 | AATGGCTATCGAAATCAAAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceF | ||||
| Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0115 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0153 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03258 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00119 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0661 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0748 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0768 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4010 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3788 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0660 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2045 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -78
Score: 4.8 Sequence: CAATGAGATTTAGATCACATAT
Locus tag: Salmonelentericaenterica_010100011950
|
||||
| Salmonelentericaenterica_010100011950 | -78 | 4.8 | CAATGAGATTTAGATCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cdd | ||||
| Ortholog function: cytidine deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2143 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 5.1 | TAATGAGATTCAGATCACATAT | ||
| Salmonella typhimurium LT2 | STM2183 | -128 | 4.2 | ATTTGCGATACGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTAGATCACATAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00646 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTGGATCACATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02584 | -78 | 4.4 | GAATGAGATATTCATCACATAT |
| Enterobacter sp. 638 | Ent638_2746 | -127 | 4.2 | ATTTGCGATGCGTCGCGCAATT |
| -77 | 4.9 | TAATGAGAACTGGATCACATAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2202 | -124 | 3.9 | ACTTGCGATAAGTCTCTCATTT |
| -104 | 4.1 | TTTGGTGATGCATTTCATTTAT | ||
| -74 | 4.7 | TAGAGCGATTTAGATCACATAT | ||
| Yersinia pestis KIM | y2657 | -75 | 5 | TAATGAGATATAAATCACAATT |
| Serratia proteamaculans 568 | Spro_1568 | -127 | 4.1 | ACTTGCGATACATCTCGCAATT |
| -77 | 4.5 | TAAAGAGATTTACATCACACTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2830 | -130 | 4.6 | AATTGAGATACATCTCGCATTT |
| -79 | 4.5 | TAAAGAGATTCCGATCACAATT | ||
| Edwardsiella tarda EIB202 | ETAE_1162 | -76 | 4.9 | AAAAGTGATTATTATCACAAAT |
| Proteus mirabilis HI4320 | PMI0643 | -132 | 4.4 | ATTTGAGATGTATCTCCCAATT |
| -82 | 5.1 | AAATATGATTTTAATCACATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1547 | -75 | 4.7 | CTATATGATATTTATCACATTA |
|
Position: -137
Score: 5 Sequence: TGATGTGACAAACATCACATTA
Locus tag: Salmonelentericaenterica_010100012752
|
||||
| Salmonelentericaenterica_010100012752 | -137 | 5 | TGATGTGACAAACATCACATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhfC | ||||
| Ortholog function: Predicted purine nucleoside transporter, MFS superfamily | ||||
| Salmonella typhimurium LT2 | STM3473 | -137 | 5 | TGATGTGACAAACATCACATTA |
| -84 | 3.8 | ATTATTTAAATGCATCACAAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03750 | -140 | 5.3 | AAGCGTGATGCAGATCACATTA |
| -109 | 3.7 | AAAGATAACCCATTTCACAATA | ||
| Enterobacter sp. 638 | Ent638_3791 | -206 | 4.8 | AAAAGTGACTTAGATCACATTG |
| Serratia proteamaculans 568 | Spro_2681 | -82 | 4.3 | AATTGTGAACCCGATCACTTCA |
|
Position: -316
Score: 5.1 Sequence: TAATGTGATGTTTGTCACATCA
Locus tag: Salmonelentericaenterica_010100012757
|
||||
| Salmonelentericaenterica_010100012757 | -316 | 5.1 | TAATGTGATGTTTGTCACATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppiA | ||||
| Ortholog function: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3363 | -204 | 4.2 | TTTTGTGATCTGTTTAAATGTT |
| -151 | 4.2 | AGAGGTGATTTTGATCACGGAA | ||
| Salmonella typhimurium LT2 | STM3472 | -214 | 4.3 | TTTTGTGATGCATTTAAATAAT |
| -161 | 5.1 | TAATGTGATGTTTGTCACATCA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04785 | -215 | 3.7 | TTTAGTGATGTATTTAAATGTT |
| -162 | 5.2 | TAACGTGACATTGATCACATTA | ||
|
Position: -182
Score: 4.3 Sequence: GAACGTGATAGCGTTCACAGTT
Position: -147
Score: 4 Sequence: CGGTGTGATGTCGTCCGCATTT
Position: -62
Score: 3.8 Sequence: TAAGGTGAGGCCGATAACCCTT
Locus tag: Salmonelentericaenterica_010100013022
|
||||
| Salmonelentericaenterica_010100013022 | -182 | 4.3 | GAACGTGATAGCGTTCACAGTT | |
| -147 | 4 | CGGTGTGATGTCGTCCGCATTT | ||
| -62 | 3.8 | TAAGGTGAGGCCGATAACCCTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaS | ||||
| Ortholog function: L-rhamnose operon regulatory protein RhaS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3905 | -182 | 4.5 | GAACGTGATGATGTTCACAATT |
| -147 | 4.5 | TGATGTGATGCTCACCGCATTT | ||
| Salmonella typhimurium LT2 | STM4048 | -182 | 4.3 | GAACGTGATAGCGTTCACAGTT |
| -147 | 4 | CGGTGTGATGTCGTCCGCATTT | ||
| -62 | 3.8 | TAAGGTGAGGCCGATAACCCTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03099 | -194 | 4.5 | GAACGTGATAGCGTTCACAATT |
| -34 | 4.3 | ATTTCTGACATGTTTCTCATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04214 | -204 | 3.8 | GACCGTGAGGGACATCACAGTT |
| Enterobacter sp. 638 | Ent638_4066 | -194 | 4.2 | GAACGTGAGGGAGTTCACAGTT |
| Yersinia pestis KIM | y0590 | -214 | 3.9 | GAAAGTGAAACAGCTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0441 | -144 | 3.9 | CGGTGTGATCCTTGCCACACTT |
|
Position: -141
Score: 3.8 Sequence: GAATGTGAACTAAATCACTTCA
Locus tag: Salmonelentericaenterica_010100013077
|
||||
| Salmonelentericaenterica_010100013077 | -141 | 3.8 | GAATGTGAACTAAATCACTTCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rnk | ||||
| Ortholog function: Regulator of nucleoside diphosphate kinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0610 | -140 | 3.8 | GAATGTGACGCAAATCACTTCA |
| Salmonella typhimurium LT2 | STM0616 | -141 | 3.8 | GAATGTGAACTAAATCACTTCA |
| Citrobacter koseri ATCC BAA-895 | CKO_02549 | -141 | 3.9 | GAATGTGAGCTAAATCACTTCA |
| Enterobacter sp. 638 | Ent638_1148 | -187 | 4.1 | AAATCTGAGAACGATCACGTTT |
| -140 | 3.8 | GAATGTGACATTCATCACTTCA | ||
| Serratia proteamaculans 568 | Spro_4382 | -170 | 3.7 | CTTCGTGATCGGGATCTCTTTC |
| -67 | 3.8 | TTTTGTGCTGTTTTTCCGAATT | ||
| Edwardsiella tarda EIB202 | ETAE_0492 | -145 | 4.4 | ATTTGTGAGCCAGCTCTCTTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4046 | -127 | 3.7 | GTTCGTGATCATGATCTCTTTA |
|
Position: -242
Score: 4.9 Sequence: AATCTTGATTTAGATCACACAA
Locus tag: Salmonelentericaenterica_010100013277
|
||||
| Salmonelentericaenterica_010100013277 | -242 | 4.9 | AATCTTGATTTAGATCACACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1241 | -241 | 5 | AAATTTGATTTGGATCACGTAA |
| Salmonella typhimurium LT2 | STM1749 | -242 | 4.9 | AATCTTGATTTAGATCACACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01318 | -242 | 4.9 | AAATTTGATCTGGATCACGCAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -237 | 4.7 | ATACTTGATCTAAATCACGTAA |
| Enterobacter sp. 638 | Ent638_2304 | -253 | 4.1 | TAAATTGATTCAGATCATGTTT |
| Erwinia amylovora ATCC 49946 | EAM_1900 | -223 | 3.9 | ATTGATGATCTGCATCATCTTT |
| Yersinia pestis KIM | y2023 | -286 | 5.3 | TTTTGTGATTTAAATCACGAAA |
| Serratia proteamaculans 568 | Spro_2704 | -278 | 5.1 | TTTTATGATTTAAATCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -315 | 4.5 | AAGTTCGATGTTGATCACAAAA |
| Edwardsiella tarda EIB202 | ETAE_1508 | -265 | 5 | TTTCGTGACCTTAATCACAAAA |
| Proteus mirabilis HI4320 | PMI1486 | -246 | 5.4 | TATTGTGATGTAGATCACTTTA |
| -187 | 3.7 | AAAGGAGATCTTTTTAAAATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -237 | 3.7 | TATTTTTATTAGATTAAAAATT |
| -138 | 4.6 | TTATGTGATTAAGATCAATATA | ||
|
Position: -124
Score: 4.7 Sequence: TTTTGTGATGCGGCGCATAAAT
Locus tag: Salmonelentericaenterica_010100013317
|
||||
| Salmonelentericaenterica_010100013317 | -124 | 4.7 | TTTTGTGATGCGGCGCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiH | ||||
| Ortholog function: putative transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0796 | -123 | 4.5 | TTTTGTGACGCAGCGCATAAAT |
| Salmonella typhimurium LT2 | STM0819 | -124 | 4.7 | TTTTGTGATGCGGCGCATAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02331 | -124 | 4.5 | TTTTGTGACATACCGCATAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00824 | -224 | 3.6 | AAATGAAACGGTATTCAAAAAA |
| -118 | 4.7 | AATTGTTAAGCCCATCACAAAT | ||
| Enterobacter sp. 638 | Ent638_1287 | -126 | 4.4 | TTTTGTGACACGGCGCATAAAA |
| Serratia proteamaculans 568 | Spro_1330 | -146 | 4.6 | TTAAGTGACGCAGAGCACAATA |
| Proteus mirabilis HI4320 | PMI0619 | -160 | 3.6 | AATTTTTAAATAAATCATGTTT |
|
Position: -278
Score: 5.2 Sequence: ATGTGTGAAGTTGATCACATAT
Locus tag: Salmonelentericaenterica_010100013547
|
||||
| Salmonelentericaenterica_010100013547 | -278 | 5.2 | ATGTGTGAAGTTGATCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: proP | ||||
| Ortholog function: L-Proline/Glycine betaine transporter ProP | ||||
| Salmonella typhimurium LT2 | STM4290 | -235 | 5.2 | ATGTGTGAAGTTGATCACATAT |
| Serratia proteamaculans 568 | Spro_1860 | -132 | 5.1 | TTACGTGATTCGCATCACACAA |
|
Position: -158
Score: 4.7 Sequence: AAAGGTGATGGATATCACAAAC
Locus tag: Salmonelentericaenterica_010100013627
|
||||
| Salmonelentericaenterica_010100013627 | -158 | 4.7 | AAAGGTGATGGATATCACAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeaQ | ||||
| Ortholog function: Transglycosylase associated protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1795 | -98 | 4.2 | CTCCGTGATGCTCGTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_01818 | -97 | 4.9 | AAAAGTGACATTTATCACAAAT |
| Enterobacter sp. 638 | Ent638_1658 | -245 | 3.7 | CAATGTGAGCAATGTCGTACTA |
| -101 | 4.8 | CACTGTGATACCTATCACAAAT | ||
|
Position: -95
Score: 4.8 Sequence: AAATGTGCCTTGTGTCACATTT
Locus tag: Salmonelentericaenterica_010100013987
|
||||
| Salmonelentericaenterica_010100013987 | -95 | 4.8 | AAATGTGCCTTGTGTCACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dacD2 | ||||
| Ortholog function: D-alanyl-D-alanine carboxypeptidase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2010 | -99 | 4.3 | AAATGAGAGGGTAGTCACATTT |
| Salmonella typhimurium LT2 | STM2062 | -95 | 4.8 | AAATGTGCCTTGTGTCACATTT |
|
Position: -279
Score: 3.6 Sequence: TCTTGTTACAAGTTTAACACTT
Locus tag: Salmonelentericaenterica_010100014287
|
||||
| Salmonelentericaenterica_010100014287 | -279 | 3.6 | TCTTGTTACAAGTTTAACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: csgD | ||||
| Ortholog function: DNA-binding transcriptional activator in two-component regulatory system | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1040 | -201 | 3.9 | TTTAGTTACATGTTTAACACTT |
| -134 | 3.3 | TAGTTTTATATTTTACCCATTT | ||
| Salmonella typhimurium LT2 | STM1142 | -202 | 3.4 | TTTGGTTACAAGTTTAACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02029 | -207 | 4.1 | TTTTGTTACAAGTTTAACACTT |
|
Position: -55
Score: 5.3 Sequence: TTATGTGATCTAAATCACTTTT
Locus tag: Salmonelentericaenterica_010100014602
|
||||
| Salmonelentericaenterica_010100014602 | -55 | 5.3 | TTATGTGATCTAAATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aaeR | ||||
| Ortholog function: LysR-family transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3243 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Salmonella typhimurium LT2 | STM3367 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04651 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03652 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Enterobacter sp. 638 | Ent638_3680 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Erwinia amylovora ATCC 49946 | EAM_3128 | -37 | 5.3 | AAATGTGATCTAAATCACTTTT |
| Yersinia pestis KIM | y0180 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Serratia proteamaculans 568 | Spro_4393 | -37 | 4.9 | ATCTGTGATCTAAATCACTTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0276 | -37 | 5.1 | TAGTGTGATCTAAATCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_3129 | -131 | 4.5 | ATCTGTGACGCAAATCACTTTT |
|
Position: -166
Score: 5.4 Sequence: AAAAGTGATTTAGATCACATAA
Locus tag: Salmonelentericaenterica_010100014607
|
||||
| Salmonelentericaenterica_010100014607 | -166 | 5.4 | AAAAGTGATTTAGATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhcR | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3242 | -167 | 5.4 | AAAAGTGATTTAGATCACATAA |
| Salmonella typhimurium LT2 | STM3366 | -166 | 5.4 | AAAAGTGATTTAGATCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04650 | -168 | 5.4 | AAAAGTGATTTAGATCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03651 | -116 | 5.2 | AAAAGTGATTTAGATCACACAT |
| -63 | 3.7 | TATTGTTAGCTACATAATAAAC | ||
| Enterobacter sp. 638 | Ent638_3679 | -165 | 5.4 | AAAAGTGATTTAGATCACATAT |
| Yersinia pestis KIM | y0179 | -269 | 5.2 | AAAAGTGATTTAGATCACACAT |
| Serratia proteamaculans 568 | Spro_4392 | -293 | 5.1 | AAAAGTGATTTAGATCACAGAT |
| -89 | 3.8 | ATTTGTGGTGCGTGTCAGCTAA | ||
|
Position: -99
Score: 3.9 Sequence: ATGAGTGACATGTGCCACACTT
Locus tag: Salmonelentericaenterica_010100015537
|
||||
| Salmonelentericaenterica_010100015537 | -99 | 3.9 | ATGAGTGACATGTGCCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybaY | ||||
| Ortholog function: Glycoprotein-polysaccharide metabolism | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0453 | -101 | 4.3 | ATGCGTGATGTGTGCCACACTT |
| Salmonella typhimurium LT2 | STM0465 | -100 | 3.9 | ATGAGTGACATGTGCCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02705 | -102 | 4 | ATAAGTGAGATATGCCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00416 | -99 | 3.8 | ATCTGAGATCTGTGCCACACTT |
| Enterobacter sp. 638 | Ent638_0921 | -96 | 4.3 | ATAAGTGATATGTGCCACACTT |
|
Position: -137
Score: 3.5 Sequence: AAGTGTGGCACATGTCACTCAT
Locus tag: Salmonelentericaenterica_010100015542
|
||||
| Salmonelentericaenterica_010100015542 | -137 | 3.5 | AAGTGTGGCACATGTCACTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tesB | ||||
| Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0452 | -138 | 3.9 | AAGTGTGGCACACATCACGCAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02706 | -135 | 3.9 | AAGTGTGGCATATCTCACTTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00415 | -139 | 3.8 | AAGTGTGGCACAGATCTCAGAT |
| Enterobacter sp. 638 | Ent638_0920 | -131 | 4 | AAGTGTGGCACATATCACTTAT |
| Yersinia pestis KIM | y1043 | -153 | 3.6 | TAGCGTGCTAATTATAGCATAA |
| Serratia proteamaculans 568 | Spro_1111 | -54 | 3.6 | TGCCGTGATATTCCGCACACTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1162 | -154 | 3.7 | TAGTATGATTCAATAAACACAA |
|
Position: -241
Score: 4 Sequence: GAATGCGATTACAGTCACATTA
Position: -107
Score: 3.9 Sequence: AATCGTGATTTTGTCCAGATAC
Locus tag: Salmonelentericaenterica_010100016072
|
||||
| Salmonelentericaenterica_010100016072 | -241 | 4 | GAATGCGATTACAGTCACATTA | |
| -107 | 3.9 | AATCGTGATTTTGTCCAGATAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pck | ||||
| Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3403 | -240 | 4.2 | GAATGCGATTCCACTCACAATA |
| -137 | 4 | TTTCGTGACAGGAATCACGGAG | ||
| Salmonella typhimurium LT2 | STM3500 | -241 | 4 | GAATGCGATTACAGTCACATTA |
| -107 | 3.9 | AATCGTGATTTTGTCCAGATAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04825 | -107 | 3.9 | AATCGTGATTTTGTCCAGATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03773 | -242 | 3.7 | GAAAGCGATTACATTCACATTT |
| -138 | 3.7 | CTTCGTGACAGGAGTCACCGTT | ||
| Enterobacter sp. 638 | Ent638_3816 | -241 | 4.1 | GTATGCGATTACATTCACATTA |
| Yersinia pestis KIM | y3918 | -130 | 4.2 | ATTCGTGTTCCATCTCTCATAA |
| -80 | 3.8 | ATATTTGATAGCTATCGCTGTT | ||
| Serratia proteamaculans 568 | Spro_4617 | -80 | 4.1 | ATATTTGATACCTATCGCGGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4106 | -81 | 4 | TTTTATGATTGCTATCGCGGTT |
| Edwardsiella tarda EIB202 | ETAE_3277 | -82 | 3.9 | TTTTTTGATGACTATCTCGGTT |
| Proteus mirabilis HI4320 | PMI3015 | -131 | 4 | ATTTGTGCATTAGTTCTCGTTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0100 | -86 | 3.8 | TTTTTTGATAACTATCGCTGTT |
|
Position: -88
Score: 4.7 Sequence: ACGTGTGATGTAGATCACATCT
Locus tag: Salmonelentericaenterica_010100017041
|
||||
| Salmonelentericaenterica_010100017041 | -88 | 4.7 | ACGTGTGATGTAGATCACATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycfR | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1112 | -114 | 3.7 | ATTAATGATTGTTATAAAAAAT |
| -87 | 4.8 | GTATGTGATCCAGATCACATCT | ||
| Salmonella typhimurium LT2 | STM1214 | -88 | 4.7 | ACGTGTGATGTAGATCACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_01942 | -113 | 3.8 | TATAATGATCGTTATAAAAAAA |
| -86 | 4.5 | ACGTGTGACCTGGATCACATCT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01110 | -95 | 4.9 | ACGTGTGACATAGATCACATTA |
| Enterobacter sp. 638 | Ent638_1627 | -91 | 4.7 | ACGTGTGATGCAGATCACATCT |
| Serratia proteamaculans 568 | Spro_4435 | -116 | 3.7 | TTATTTGATAAAGATTATCAAA |
|
Position: -178
Score: 4.2 Sequence: TCATGTGACCCATATCTCCTTA
Position: -117
Score: 4.2 Sequence: TATTGTGATTTTGCGCATTAAA
Locus tag: Salmonelentericaenterica_010100017166
|
||||
| Salmonelentericaenterica_010100017166 | -178 | 4.2 | TCATGTGACCCATATCTCCTTA | |
| -117 | 4.2 | TATTGTGATTTTGCGCATTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glgS | ||||
| Ortholog function: glycogen synthesis protein GlgS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3049 | -225 | 3.4 | AATAGTTTCCTTGCTTACATTT |
| -203 | 3.4 | ATCTGTGTTAATAATAACACAG | ||
| -124 | 3.8 | AAGTGTGATCGGGGACAATATA | ||
| Salmonella typhimurium LT2 | STM3197 | -222 | 3.3 | TCGCGTGATAATTTTCATGCTT |
| -178 | 4.2 | TCATGTGACCCATATCTCCTTA | ||
| -117 | 4.2 | TATTGTGATTTTGCGCATTAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04437 | -118 | 3.4 | AAGTGTGATGTCAGGCAACTGA |
|
Position: -253
Score: 4.7 Sequence: TTATGTGATCTGTGTTGCATAA
Locus tag: Salmonelentericaenterica_010100017736
|
||||
| Salmonelentericaenterica_010100017736 | -253 | 4.7 | TTATGTGATCTGTGTTGCATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malK | ||||
| Ortholog function: maltose/maltodextrin transporter ATP-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4035 | -254 | 4.4 | TTGTGTGATCTCTGTTACAGAA |
| -225 | 3.9 | TAATGTGGAGATGCGCACATAA | ||
| -191 | 3.7 | TTTTGCAAGCAACATCACGAAA | ||
| Salmonella typhimurium LT2 | STM4230 | -254 | 4.7 | TTATGTGATCTGTGTTGCATAA |
| -225 | 3.6 | TAATGCGTGCTGGCGCACACAA | ||
| -223 | 3.8 | ATGCGTGCTGGCGCACACAAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03880 | -254 | 4.7 | TTATGTGATCTGTGTTGCATAA |
| -225 | 3.7 | TAATGCGTGTTGGCGCACATAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04424 | -254 | 4.5 | TTGTGTGATCTCCATTGCAAAA |
| -225 | 3.7 | TATTGCGTCCTGGAGCACAGAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0457 | -250 | 4 | GGGTGTGATCTCTATTACAAAA |
| -221 | 3.8 | AAGCGTGCCGTTGCCCACAAAA | ||
| -187 | 4.9 | TTTTGCGATAAATATCACAATT | ||
|
Position: -282
Score: 4 Sequence: TTATGTGACTTACTGCAATATT
Position: -191
Score: 3.9 Sequence: AAATAGGATTTTCCTCACGAAT
Locus tag: Salmonelentericaenterica_010100018611
|
||||
| Salmonelentericaenterica_010100018611 | -282 | 4 | TTATGTGACTTACTGCAATATT | |
| -191 | 3.9 | AAATAGGATTTTCCTCACGAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yffB | ||||
| Ortholog function: FIG138056: a glutathione-dependent thiol reductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2471 | -246 | 3.8 | GTATGTGATACACAGCAACATT |
| Salmonella typhimurium LT2 | STM2482 | -282 | 4 | TTATGTGACTTACTGCAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_00317 | -276 | 4 | TTATGTGACTTACTGCAATATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02804 | -218 | 4 | TAATGTGACGTAGAGCAACCTC |
| -179 | 4 | TAATGTTAAAGCCCTCACATCA | ||
| Enterobacter sp. 638 | Ent638_2966 | -254 | 4 | TTATGTGACCAATAGCAATATT |
| -77 | 3.6 | ATATGTTATGTTTTGCCAAATA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1292 | -138 | 3.7 | TTCTGCAACGCAGTTCACAGTA |
|
Position: -263
Score: 4.6 Sequence: CATTGTGATTAGCCTCACATCT
Locus tag: Salmonelentericaenterica_010100019426
|
||||
| Salmonelentericaenterica_010100019426 | -263 | 4.6 | CATTGTGATTAGCCTCACATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galP | ||||
| Ortholog function: sugar transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2943 | -156 | 3.6 | TATGATGATATAACTCAATTAT |
| -82 | 4.9 | TGATGTGATTTGCTTCACATCT | ||
| Salmonella typhimurium LT2 | STM3091 | -83 | 4.6 | CATTGTGATTAGCCTCACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_04318 | -83 | 5.3 | TAACGTGATTCGAATCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03376 | -84 | 3.8 | AGCCGTGATTATAGTCACGTTT |
| Enterobacter sp. 638 | Ent638_3347 | -171 | 3.9 | TATTGGGATGCACATCAACTCT |
| -102 | 3.7 | TAGTGTAACCGATTACACCAAT | ||
| -84 | 5.3 | CAATGTGATTTATCTCACATAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2827 | -152 | 4.1 | TCATGTGATCTGTCGCACAGTC |
| Serratia proteamaculans 568 | Spro_1160 | -276 | 4.5 | TGGTGTGATATCGGTTACATTT |
| -100 | 3.6 | TTGTGTAATCGTTTCCACTAAT | ||
| -82 | 4.6 | TAATGTGATCGCACTCACTTAC | ||
| Edwardsiella tarda EIB202 | ETAE_2966 | -275 | 3.7 | CAAAGTGAAAACGATTACATTT |
| -61 | 4.5 | TTATGTGATCATGCGCACTTTA | ||
|
Position: -153
Score: 3.9 Sequence: TGCGGTGATCTGGATCACGTTC
Locus tag: Salmonelentericaenterica_010100020306
|
||||
| Salmonelentericaenterica_010100020306 | -153 | 3.9 | TGCGGTGATCTGGATCACGTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: garD | ||||
| Ortholog function: D-galactarate dehydratase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3128 | -210 | 4.2 | TATTTTGAGCATATGCACATAA |
| -127 | 4.4 | ATGATTGACATTGATCACATTT | ||
| -52 | 3.7 | AAATGAGACCAGGTCCTCATTT | ||
| Salmonella typhimurium LT2 | STM3250 | -153 | 4.3 | TGCGGTGATCTGGATCACATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_04527 | -54 | 4 | AGTTGTTCTCTTTAACACATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03540 | -125 | 4.8 | AGGAGTGATGCCGATCACATTT |
| Enterobacter sp. 638 | Ent638_3570 | -143 | 4.7 | AGGGGTGATCTTGATCACATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3578 | -296 | 4.2 | TAGTGCGAGGTATTTCACGAAA |
| -204 | 5.1 | AAATGTGATCAAACTCACCAAA | ||
|
Position: -38
Score: 3.3 Sequence: ATTTGTGAGCATTTTTGAACTC
Locus tag: Salmonelentericaenterica_010100020881
|
||||
| Salmonelentericaenterica_010100020881 | -38 | 3.3 | ATTTGTGAGCATTTTTGAACTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galS | ||||
| Ortholog function: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2151 | -146 | 3.5 | GATAACGATCTGGATCACATTC |
| -95 | 3.9 | TGCTGTGACTCGATTCACGAAG | ||
| Salmonella typhimurium LT2 | STM2191 | -154 | 3.5 | GATAACGATCTGGATCACATTC |
| -103 | 3.5 | CCCTGTGATGTTTCTCACGCAG | ||
| -38 | 3.3 | ATTTGTGAGCATTTTTGAACTC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00640 | -157 | 3.5 | GATAACGATCTGGATCACATTC |
| -106 | 3.4 | CCCTGTGACCTTACTCACGTAG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02589 | -160 | 3.3 | GATAACGATCTCGATCACAATC |
| -109 | 3.4 | CCGTGTGACCTCACTCACGCAG | ||
| -33 | 3.6 | TGACGTGCTGTAATTCTCTTAA | ||
| Enterobacter sp. 638 | Ent638_2751 | -160 | 3.4 | GATAACGATCTGGATCACAATC |
| -109 | 4.1 | CTGTGTGAGCTTCTTCACGTAG | ||
| Erwinia amylovora ATCC 49946 | EAM_2208 | -110 | 3.4 | GGCTGTGAGGTTTCTCACGTAG |
| Serratia proteamaculans 568 | Spro_1562 | -135 | 3.4 | AATTGAGATCTGGCGCAGGTAG |
| -84 | 3.5 | TCCTGTGACGGGATTCACGCAG | ||
|
Position: -154
Score: 4.1 Sequence: AAACTTGATGCACATCAATTTT
Locus tag: Salmonelentericaenterica_010100021383
|
||||
| Salmonelentericaenterica_010100021383 | -154 | 4.1 | AAACTTGATGCACATCAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh | ||||
| Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1109 | -154 | 3.9 | AAACTTGATTAACATCAATTTT |
| Salmonella typhimurium LT2 | STM1211 | -154 | 4.1 | AAACTTGATGCACATCAATTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01106 | -152 | 4.1 | AAACTTGATGCACATCAATTTT |
| Enterobacter sp. 638 | Ent638_1624 | -153 | 4 | AAACTTGATTCATATCAATTTT |
| Erwinia amylovora ATCC 49946 | EAM_1473 | -55 | 3.7 | TAAGGTTATTTTATTAACCTTT |
| Yersinia pestis KIM | y1777 | -152 | 3.8 | AAAGTTGATATATATCAATTTT |
| Serratia proteamaculans 568 | Spro_1926 | -153 | 4.3 | AAGTTTGATGTACATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1815 | -153 | 4 | TAAATTGATATATATCAATTTT |
| Edwardsiella tarda EIB202 | ETAE_2070 | -166 | 4.3 | TTATTTGATTTGAATCAATTTT |
| Proteus mirabilis HI4320 | PMI0875 | -157 | 4.6 | TTTTTTGATATAAATCAACTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2821 | -154 | 3.8 | GAATTTGATGTTGTTCAATTTT |
|
Position: -149
Score: 5.7 Sequence: TTTTGTGATATAGTTCACAAAA
Locus tag: Salmonelentericaenterica_010100021698
|
||||
| Salmonelentericaenterica_010100021698 | -149 | 5.7 | TTTTGTGATATAGTTCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjcB | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4060 | -149 | 5.7 | AATTGTGATATAGTTCACAAAA |
| Salmonella typhimurium LT2 | STM4263 | -149 | 5.7 | TTTTGTGATATAGTTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03830 | -150 | 5.7 | TATTGTGATATAGTTCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04460 | -143 | 5.4 | AAGTGTGATATAGTTCACACAA |
| Enterobacter sp. 638 | Ent638_0263 | -82 | 5.3 | AAACGTGATATAGTTCACACAT |
| Serratia proteamaculans 568 | Spro_2355 | -81 | 5 | CAATGTGACGCAGATCACACTA |
|
Position: -290
Score: 3.5 Sequence: TTGTGCGACATACCGCACGGTT
Position: -238
Score: 3.6 Sequence: TTATGTAACGTAATAAAAATTA
Locus tag: Salmonelentericaenterica_010100021708
|
||||
| Salmonelentericaenterica_010100021708 | -290 | 3.5 | TTGTGCGACATACCGCACGGTT | |
| -238 | 3.6 | TTATGTAACGTAATAAAAATTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: igaA | ||||
| Ortholog function: IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3398 | -288 | 3.6 | TTGTGCGATATCGGACACGCTT |
| -123 | 3.8 | TACTGTGATGTGCTTAATGATG | ||
| Salmonella typhimurium LT2 | STM3495 | -238 | 3.6 | TTATGTAACGTAATAAAAATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04821 | -290 | 3.9 | TTGTGCGATATACAGCACGGTT |
| -238 | 3.7 | TTATGTAACGTAGTAAAAATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03769 | -282 | 3.8 | TTGTGCGATACGCAACACGCTT |
| Enterobacter sp. 638 | Ent638_3811 | -287 | 3.7 | TTGTGCGATATGACGCACGGTT |
| Yersinia pestis KIM | y3922 | -186 | 3.7 | TATTGTGACTGCGTTAGCTTTG |
|
Position: -54
Score: 3.5 Sequence: AACCGTGCGGTATGTCGCACAA
Locus tag: Salmonelentericaenterica_010100021713
|
||||
| Salmonelentericaenterica_010100021713 | -54 | 3.5 | AACCGTGCGGTATGTCGCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nudE | ||||
| Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3397 | -53 | 3.7 | AAGCGTGTCCGATATCGCACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04820 | -54 | 4.1 | AACCGTGCTGTATATCGCACAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03768 | -54 | 4 | AAGCGTGTTGCGTATCGCACAA |
| Enterobacter sp. 638 | Ent638_3810 | -55 | 3.6 | AACCGTGCGTCATATCGCACAA |
| Yersinia pestis KIM | y3923 | -247 | 4.5 | CAATGTGATCAAGTTCTAATAT |
| Serratia proteamaculans 568 | Spro_4612 | -135 | 4.4 | CAATGTGATCAAGATCGGATTT |
| Edwardsiella tarda EIB202 | ETAE_3268 | -116 | 3.6 | AAATATGAGCATCTGCGCACAA |
|
Position: -25
Score: 3.7 Sequence: ATACGTGAAAGGAACAACAAAA
Locus tag: Salmonelentericaenterica_010100021923
|
||||
| Salmonelentericaenterica_010100021923 | -25 | 3.7 | ATACGTGAAAGGAACAACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: maeB | ||||
| Ortholog function: malic enzyme | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2463 | -257 | 3.9 | ATGAGTGCGTTAATTCACACTT |
| Salmonella typhimurium LT2 | STM2472 | -240 | 3.8 | ATGAGTGTGTTGATTCACACTT |
| Enterobacter sp. 638 | Ent638_2958 | -231 | 4.1 | ATACATGACGTACTTAACAAAA |
| Yersinia pestis KIM | y1449 | -92 | 3.7 | GATTGTGATAAATCACTCACTA |
| Serratia proteamaculans 568 | Spro_3472 | -209 | 3.6 | CTTTGTTATCAAACTCACTATC |
| -90 | 4.1 | GTTTGTGACGTTTCTCTCACTA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2719 | -74 | 4 | TGTTATGATTTGACACACAGTA |
|
Position: -200
Score: 3.6 Sequence: AAGGTTGAGTTAGATCGCAGAA
Locus tag: Salmonelentericaenterica_010100021933
|
||||
| Salmonelentericaenterica_010100021933 | -200 | 3.6 | AAGGTTGAGTTAGATCGCAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yejG | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2181 | -158 | 3.7 | AAACGTGACCACGCCCGCAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02614 | -204 | 3.8 | AAAGTTGTTTTGGATCACAGAA |
| Erwinia amylovora ATCC 49946 | EAM_2233 | -177 | 3.6 | AAATGAGCATTACTTCTCAAAA |
| Yersinia pestis KIM | y2914 | -238 | 4.4 | AAATGGGATCTGAATCCCAAAT |
| Serratia proteamaculans 568 | Spro_3250 | -214 | 4.2 | AAATGCGAGCTGAGTCGCAAAA |
| -121 | 4.1 | GCTTGTGATGTTTTTTACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2740 | -178 | 4 | ATTCGTGATCAGTTTGGCATTA |
| -101 | 3.8 | TGTTGTTTTTTTGTTCACGAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2865 | -185 | 4.1 | AAATGAGAGATTGATCTCACTT |
| -183 | 3.6 | ATGAGAGATTGATCTCACTTTT | ||
| -141 | 3.8 | TAATGTAATACTATAAACACAA | ||
|
Position: -145
Score: 3.8 Sequence: TTTATTGATATTTATAATAAAT
Position: -56
Score: 4.9 Sequence: AATCGTGATACAGCGCACAAAT
Locus tag: Salmonelentericaenterica_010100022063
|
||||
| Salmonelentericaenterica_010100022063 | -145 | 3.8 | TTTATTGATATTTATAATAAAT | |
| -56 | 4.9 | AATCGTGATACAGCGCACAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yicG | ||||
| Ortholog function: Putative inner membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3646 | -58 | 4.4 | AATCGTGACAATGCGCACAAAT |
| Salmonella typhimurium LT2 | STM3738 | -210 | 3.7 | TTAAATTATCTAAGTCAAAATA |
| -147 | 3.8 | TTTATTGATATTTATAATAAAT | ||
| -58 | 4.9 | AATCGTGATACAGCGCACAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05103 | -58 | 4.7 | AATCGTGATATTACGCACAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03994 | -55 | 4.9 | AATCGTGATCCTGCGCACAAAT |
| Enterobacter sp. 638 | Ent638_0094 | -55 | 3.9 | AATCGTGATATGTTCTGCAAAA |
| Edwardsiella tarda EIB202 | ETAE_0032 | -180 | 3.8 | AAAACTAATCTATATCAAATAT |
|
Position: -128
Score: 4 Sequence: TGCGGTGAGTTGTTTCACAAAA
Locus tag: Salmonelentericaenterica_010100022073
|
||||
| Salmonelentericaenterica_010100022073 | -128 | 4 | TGCGGTGAGTTGTTTCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbI | ||||
| Ortholog function: Hypothetical transcriptional regulator ygbI | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2735 | -166 | 3.7 | TTGTTTGATATTGTGAATATAA |
| -127 | 5.2 | TATGGTGATCTGATTCACATAA | ||
| Salmonella typhimurium LT2 | STM2919 | -128 | 4 | TGCGGTGAGTTGTTTCACAAAA |
| -87 | 3.6 | TTTTGTGAAGGCAATCCTCATA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01606 | -271 | 3.6 | TAATGTGATTTAATGATAGAAT |
| -230 | 4.7 | ATATGTGAGAGTTATCACGAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_pKPN4p07051 | -233 | 3.6 | TAATGTGATTTAATGATAGAAT |
| -192 | 4.7 | TTATGTGAGAGTTATCACGAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_1104 | -238 | 4.5 | ATTAGTGATAAACTTCACATCA |
| Serratia proteamaculans 568 | Spro_1493 | -211 | 3.9 | ATCAGCGATCGTTGTCACAATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4325 | -267 | 4.8 | TGTGGTGATTTTTATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1921 | -132 | 3.9 | AACCGTGTTTATCCTCACAAAT |
|
Position: -185
Score: 4 Sequence: TTTTGTGAAACAACTCACCGCA
Locus tag: Salmonelentericaenterica_010100022078
|
||||
| Salmonelentericaenterica_010100022078 | -185 | 4 | TTTTGTGAAACAACTCACCGCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbJ | ||||
| Ortholog function: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2736 | -90 | 4.9 | TTATGTGAATCAGATCACCATA |
| Salmonella typhimurium LT2 | STM2918 | -90 | 4 | TTTTGTGAAACAACTCACCGCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01605 | -91 | 5 | ATTCGTGATAACTCTCACATAT |
| Erwinia amylovora ATCC 49946 | EAM_1106 | -90 | 4.4 | TGATGTGAAGTTTATCACTAAT |
| Serratia proteamaculans 568 | Spro_1492 | -92 | 4.1 | AATTGTGACAACGATCGCTGAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4327 | -92 | 4.5 | TTATGTGATAAAAATCACCACA |
| Edwardsiella tarda EIB202 | ETAE_1922 | -93 | 3.9 | ATTTGTGAGGATAAACACGGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2507 | -147 | 3.8 | ATAAATAATATAAATCAAATAA |
| -90 | 3.7 | GAATGTGATAACCATCGTGTAT | ||
|
Position: -80
Score: 4.2 Sequence: AACTGTGATGTATATCGAAGTG
Locus tag: Salmonelentericaenterica_010100023543
|
||||
| Salmonelentericaenterica_010100023543 | -80 | 4.2 | AACTGTGATGTATATCGAAGTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC | ||||
| Ortholog function: 2-deoxyribose-5-phosphate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4381 | -149 | 4.6 | TTATTTGAACCAGATCGCATTA |
| -96 | 4.5 | AATTGTGATGTGTATCGAAGTG | ||
| Salmonella typhimurium LT2 | STM4567 | -133 | 4.9 | TAATTTGATTCAGATCTCATTA |
| -80 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03410 | -134 | 4.2 | TTATTTGAAGTGGATCTCGTTA |
| -81 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04837 | -158 | 5.2 | ATTTGTGATTTTAATCACGTTA |
| -105 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Enterobacter sp. 638 | Ent638_0541 | -151 | 4.6 | AAATTTGAAGTGGATCTCATTA |
| -98 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0615 | -233 | 4.6 | TGATGTGATAATTCTAACATTA |
| Yersinia pestis KIM | y3743 | -169 | 3.7 | TGCGGTGAGATGGATCTCAATT |
| Serratia proteamaculans 568 | Spro_0660 | -262 | 4.6 | ATTTGTGAACGATATCGCGTTA |
| -240 | 5.5 | TTTTGTGATGGTCTTCACATAT | ||
| -188 | 3.8 | TAGTGTGACTGTGAACGCGAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0727 | -282 | 4.4 | AAGTGTGAATGAATGCACAAAA |
| Proteus mirabilis HI4320 | PMI2416 | -267 | 4.4 | ATATGTGAGTTACTTCGCAACT |
| -135 | 5.6 | TTTTGTGATTCTGATCACAATT | ||
| -83 | 4.5 | TATTGTGACAGAAAGCACATCT | ||
|
Position: -82
Score: 5.6 Sequence: TAATGTGATTTACATCACACAT
Locus tag: Salmonelentericaenterica_010100023918
|
||||
| Salmonelentericaenterica_010100023918 | -82 | 5.6 | TAATGTGATTTACATCACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: raiA | ||||
| Ortholog function: stationary phase translation inhibitor and ribosome stability factor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2597 | -81 | 4.8 | TTATGAGATTTTCATCACACAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03918 | -40 | 5.2 | TAATGTGATTTAAATCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02919 | -88 | 5.6 | AAATGTGATTTATATCACACAT |
| Enterobacter sp. 638 | Ent638_3076 | -81 | 5.4 | ATGTGTGATTTAGATCACACAT |
| Erwinia amylovora ATCC 49946 | EAM_2617 | -83 | 5.2 | AAATGTGATTTCAATCACGATT |
| Serratia proteamaculans 568 | Spro_0882 | -83 | 4.8 | ATACGTGATTTTCATCACGCAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3349 | -86 | 4 | AAAAGCGATCAATCTCACGCTT |
| Edwardsiella tarda EIB202 | ETAE_2834 | -82 | 3.8 | ATCCGTGATTTTCCTCTCACAC |
| Proteus mirabilis HI4320 | PMI0391 | -82 | 4.6 | AAAAGTGATCTTGATCATGTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1266 | -87 | 5.1 | AATAGTGATTTAGATCACCTTT |
|
Position: -61
Score: 3.7 Sequence: TTCTGTGACTGGCGTTACAATC
Locus tag: Salmonelentericaenterica_010100024118
|
||||
| Salmonelentericaenterica_010100024118 | -61 | 3.7 | TTCTGTGACTGGCGTTACAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pgi | ||||
| Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9) | ||||
| Salmonella typhimurium LT2 | STM4221 | -61 | 3.7 | TTCTGTGACTGGCGTTACAATC |
| Citrobacter koseri ATCC BAA-895 | CKO_03893 | -61 | 4.1 | TTTTGTGACTGGCGTTACAATC |
| Serratia proteamaculans 568 | Spro_4477 | -80 | 3.7 | AAAAGAGATCATAATCACAGTC |
| Proteus mirabilis HI4320 | PMI2754 | -245 | 3.7 | CAGTGAGATGTTAAACACAGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4379 | -205 | 3.8 | TGACGCGATGAGAATCATAAAA |
|
Position: -201
Score: 4 Sequence: TGTTTTTACTTCACTCACATAA
Locus tag: Salmonelentericaenterica_010100024638
|
||||
| Salmonelentericaenterica_010100024638 | -201 | 4 | TGTTTTTACTTCACTCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rcsA | ||||
| Ortholog function: Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1951 | -201 | 4 | TGTTTTAAGCTCACTCACATAT |
| Salmonella typhimurium LT2 | STM1982 | -201 | 4 | TGTTTTTACTTCACTCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00992 | -200 | 4.1 | TGTTTTTACCTTACTCACATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02421 | -195 | 3.7 | TGTTTTTAATTCGGTCACACTA |
| Enterobacter sp. 638 | Ent638_2542 | -206 | 4.3 | TGTTTTTATGCCCTTCACAATA |
|
Position: -101
Score: 4 Sequence: TTATGTGCGCTACCTCACGCAC
Locus tag: Salmonelentericaenterica_010100024828
|
||||
| Salmonelentericaenterica_010100024828 | -101 | 4 | TTATGTGCGCTACCTCACGCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: folE | ||||
| Ortholog function: GTP cyclohydrolase I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2153 | -101 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Salmonella typhimurium LT2 | STM2193 | -101 | 4 | TTATGTGCGCTACCTCACGCAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00638 | -98 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02591 | -84 | 3.5 | TTCTGTGCGCCACCTCACGCAC |
| Enterobacter sp. 638 | Ent638_2753 | -84 | 3.9 | TTATGTGCGCCACCTCACGCAC |
| Serratia proteamaculans 568 | Spro_1560 | -121 | 4.3 | AATCTTGACCGGGTTCACGTTA |
| Proteus mirabilis HI4320 | PMI0639 | -86 | 4.9 | TAATGTGATTCAGCTCATCTAA |
|
Position: -154
Score: 3.5 Sequence: GTTTGTGAGGTTATTAGCGAAA
Position: -126
Score: 3.3 Sequence: ATTCGTGATCCGTTTGTTGTTT
Locus tag: Salmonelentericaenterica_010100025023
|
||||
| Salmonelentericaenterica_010100025023 | -154 | 3.5 | GTTTGTGAGGTTATTAGCGAAA | |
| -126 | 3.3 | ATTCGTGATCCGTTTGTTGTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lpdA | ||||
| Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0116 | -224 | 3.3 | AATTGTTAACAATTTTGTAAAA |
| Salmonella typhimurium LT2 | STM0154 | -153 | 3.5 | GTTTGTGAGGTTATTAGCGAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03256 | -95 | 3.3 | AATTGTTAACAATTTTGTAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00120 | -105 | 3.3 | AATTGTTAACAATTTTGTAAAA |
| Yersinia pestis KIM | y0769 | -253 | 3.3 | ATTGGTGATCTTGTTATTACTG |
| Serratia proteamaculans 568 | Spro_4009 | -246 | 3.6 | TATGGTGATGTAATGAAAAAAG |
| Proteus mirabilis HI4320 | PMI2044 | -133 | 3.4 | GGTTGTGAGATCTGTCATGTTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3621 | -131 | 3.9 | TGTTGCGAGTTCTGTCACGTTA |
|
Position: -82
Score: 4 Sequence: AAATGTGATCTGTGTTAGATCA
Locus tag: Salmonelentericaenterica_010100025293
|
||||
| Salmonelentericaenterica_010100025293 | -82 | 4 | AAATGTGATCTGTGTTAGATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompW | ||||
| Ortholog function: outer membrane protein W | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1256 | -166 | 4.9 | AAAATTGATTTAAATCACATTA |
| -82 | 3.8 | TAATGTGATCTATGTAGGATCA | ||
| Salmonella typhimurium LT2 | STM1732 | -82 | 4.2 | AAATGTGATCTGTATTAGATCA |
| Citrobacter koseri ATCC BAA-895 | CKO_01333 | -82 | 3.9 | TAATGTGATCTGTATTGGATCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01248 | -101 | 3.9 | CATTGCGATCGGTAGCAAAAAT |
| -45 | 4 | TAGTGTGATCTAAAACAGATCA | ||
| Enterobacter sp. 638 | Ent638_2283 | -121 | 3.7 | AAAATTAATCTGGATCAACAAA |
| Yersinia pestis KIM | y2044 | -69 | 3.9 | AGATGTGATCTCGATTAGATCA |
| Serratia proteamaculans 568 | Spro_2674 | -135 | 3.8 | TTTTTTGATTCAGATCAATCCT |
| Edwardsiella tarda EIB202 | ETAE_1528 | -161 | 3.9 | CTGATTGATGTCTATCAAATTT |
| Proteus mirabilis HI4320 | PMI1350 | -168 | 4.6 | AAATTTGATGTGGATCAATTAT |
| -85 | 3.8 | AGTTGTGATCGGCATTAGATCA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2478 | -164 | 4.3 | AACTTTGATTTGGATCAAGTTA |
| -39 | 3.8 | TATTTTGATTGACTTTAAATCA | ||
|
Position: -106
Score: 3.5 Sequence: GTTTGTGATCGTATTTGTAATT
Position: -75
Score: 3.6 Sequence: AAAATTGACAGCCGTCACTTTT
Position: 26
Score: 3.7 Sequence: TACCGTGATGGATCGCATCTAT
Locus tag: Salmonelentericaenterica_010100027003
|
||||
| Salmonelentericaenterica_010100027003 | -106 | 3.5 | GTTTGTGATCGTATTTGTAATT | |
| -75 | 3.6 | AAAATTGACAGCCGTCACTTTT | ||
| 26 | 3.7 | TACCGTGATGGATCGCATCTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yihV | ||||
| Ortholog function: Fructokinase (EC 2.7.1.4); Sugar kinase YihV | ||||
| Salmonella typhimurium LT2 | STM4024.S | -69 | 3.6 | AAAATTGACAGCCGTCACTTTT |
|
Position: -68
Score: 4.6 Sequence: TGATGTGATCGGTAGCACGTTT
Locus tag: Salmonelentericaenterica_010100027433
|
||||
| Salmonelentericaenterica_010100027433 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yohJ | ||||
| Ortholog function: LrgA family protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2141 | -68 | 4.9 | TAATGTGATCGGTAGCACGTTT |
| Salmonella typhimurium LT2 | STM2181 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00648 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02582 | -68 | 5 | TGATGTGATCGGTAGCACATTT |
| Enterobacter sp. 638 | Ent638_2744 | -68 | 4.7 | TGATGTGATCCGTAGCACGTTT |
| Yersinia pestis KIM | y2654 | -32 | 4.7 | TAGTGTGATGGGTAGCACAGAA |
| Serratia proteamaculans 568 | Spro_1570 | -62 | 4.3 | ATTTGTGGCGGAGGTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2828 | -69 | 4.5 | ATTCGTGATCTGTGGCACGTAA |
| Edwardsiella tarda EIB202 | ETAE_1164 | -68 | 4.9 | TGATGTGATCAGTAGCACATTT |
| Proteus mirabilis HI4320 | PMI0645 | -71 | 5.2 | TATTGTGATCCATAGCACACTT |
|
Position: -53
Score: 3.5 Sequence: GGCTGTGATCCATTTATCAAAA
Position: -2
Score: 3.5 Sequence: AAATGTTATTTAGTATACAGCT
Locus tag: Salmonelentericaenterica_010100027988
|
||||
| Salmonelentericaenterica_010100027988 | -53 | 3.5 | GGCTGTGATCCATTTATCAAAA | |
| -2 | 3.5 | AAATGTTATTTAGTATACAGCT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dcuB | ||||
| Ortholog function: C4-dicarboxylate transporter DcuB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4123 | -53 | 3.5 | GACTGTGATCTATTCAGCAAAA |
| Salmonella typhimurium LT2 | STM4301 | -53 | 3.5 | GGCTGTGATCCATTTATCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03748 | -52 | 3.9 | GACTGTGATCTATTTATCAAAA |
| Enterobacter sp. 638 | Ent638_2479 | -81 | 3.3 | AAATCTGATCTGGCTCCCAGCC |
| Serratia proteamaculans 568 | Spro_3863 | -77 | 3.6 | GTTTGTGATCGCTATCCCTCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1533 | -296 | 3.5 | TATTGCGAGCGAGATCTTTTAT |
| -247 | 3.5 | TTAATAGATTTAGATCAAGAAA | ||
| Edwardsiella tarda EIB202 | ETAE_2844 | -194 | 3.6 | ATACTTTATTCAGATCAATTTT |
| Proteus mirabilis HI4320 | PMI0389 | -138 | 3.3 | AACTATAACAACGATCAAAAAA |
|
Position: -180
Score: 3.8 Sequence: ATGTTTGATTTCGCGCGCCTTT
Position: -131
Score: 5.2 Sequence: ATATGTGCTGTAATTCACATTA
Locus tag: Salmonelentericaenterica_010100030015
|
||||
| Salmonelentericaenterica_010100030015 | -180 | 3.8 | ATGTTTGATTTCGCGCGCCTTT | |
| -131 | 5.2 | ATATGTGCTGTAATTCACATTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpT | ||||
| Ortholog function: glycerol-3-phosphate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2240 | -219 | 3.7 | TTGTTTGATTTCGCGCATATTC |
| -179 | 3.6 | AAACGTGATTTCATGCGTCATT | ||
| -129 | 4.6 | ATGTGTGCGGCAATTCACATTT | ||
| Salmonella typhimurium LT2 | STM2283 | -220 | 3.6 | ATGTTTGATTTCGCGCATAATC |
| -180 | 4.2 | AAACGTGATTTCGTGCGCCTTT | ||
| -131 | 5.2 | ATATGTGCTGTAATTCACATTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00537 | -221 | 3.6 | TTGTTTGATTTCGCGCATAATC |
| -181 | 4 | AAACGTGATTTCGTGCGCTTTT | ||
| -132 | 4.8 | ATCTGTGCTGTAATTCACATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02646 | -218 | 3.8 | TTGTTTGATTTCGAGCATATTC |
| -178 | 4.6 | TTATGTGATTTCGTGCTCACAT | ||
| -128 | 4.5 | AATTGTGCGATGTTTCACAGTA | ||
| Enterobacter sp. 638 | Ent638_2804 | -201 | 3.6 | TTGTTTGATTTCGAACATAATC |
| -161 | 3.8 | AAGCGTGATCTCATGCGCTTAT | ||
| -111 | 4 | ATCTGTGCGTTGATTCACAGTA | ||
| Erwinia amylovora ATCC 49946 | EAM_0195 | -240 | 3.7 | AAACGCGATGCGGTTAACGATG |
| -147 | 3.7 | ATTTGTGCCTCTCTTCACGGTC | ||
| Serratia proteamaculans 568 | Spro_0199 | -249 | 4.5 | GAATGTGATCATAATCACGATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4166 | -253 | 3.7 | ATGTTTGATAAAGAGCAAAAAC |
| -193 | 4.9 | AAGTGTGATTTGCATCACTAAA | ||
| Edwardsiella tarda EIB202 | ETAE_3116 | -200 | 3.7 | ATATGAGCGATCTCTCACAGTA |
| Proteus mirabilis HI4320 | PMI3591 | -291 | 3.6 | ATGTTTGATAATGAGCAAAAAC |
| -232 | 5.4 | ATATGTGATACTAATCACAAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4119 | -250 | 4.9 | TATTGTGACAATTGTCACAATT |
|
Position: -54
Score: 3.4 Sequence: TAATGGGACAGGTTCCAGATAA
Locus tag: Salmonelentericaenterica_010100032280
|
||||
| Salmonelentericaenterica_010100032280 | -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceE | ||||
| Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0114 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0152 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03259 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00118 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0660 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0747 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0767 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4011 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3789 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0659 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2046 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -330
Score: 3.6 Sequence: ATTTATGATACGTGGCTAAAAA
Locus tag: Salmonelentericaenterica_010100032675
|
||||
| Salmonelentericaenterica_010100032675 | -330 | 3.6 | ATTTATGATACGTGGCTAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfbV | ||||
| Ortholog function: putative cytoplasmic protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2295 | -263 | 3.6 | ATTTATGATTAACATCATGCAC |
| -54 | 4.1 | AGTTGTGAATTTGCACAAATTT | ||
| Erwinia amylovora ATCC 49946 | EAM_2300 | -44 | 4 | TTGTGTGTTTTTTTTAAAATTT |
| Edwardsiella tarda EIB202 | ETAE_2396 | -34 | 3.6 | TTTTTTAACTCTTATCGAATAA |
| Proteus mirabilis HI4320 | PMI1770 | -290 | 3.7 | ATTAATGATACGCATCATGCTT |
| -260 | 3.6 | AAACTTGATGCTAATTATAGTT | ||
|
Position: 9
Score: 3.8 Sequence: ATTTTTGAGAAGTATCAATTAA
Locus tag: Salmonelentericaenterica_010100032800
|
||||
| Salmonelentericaenterica_010100032800 | 9 | 3.8 | ATTTTTGAGAAGTATCAATTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_03585 | ||||
| Ortholog function: hypothetical protein | ||||
| Salmonella typhimurium LT2 | STM4446 | -229 | 4.5 | AACTGTAATACCCATCACACTT |
| -162 | 3.8 | TGCCGCGATAGATCTCACACTT | ||
| -111 | 4.1 | TTCTGTGGCGCAGATCACCTAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04639 | -172 | 4.3 | TGTTGTGATACATCTCACGCCA |
| -121 | 4.2 | ATATGTGGAGTCGATCACCTAA | ||
| Enterobacter sp. 638 | Ent638_0430 | -265 | 3.8 | AAACCTTATCCGCGTCACACTT |
| -189 | 4.6 | TAGCGTGATATTCATCACGCAA | ||
| Erwinia amylovora ATCC 49946 | EAM_0475 | -156 | 3.8 | TGATGTGAGTTGTCTCGCTTTG |
|
Position: -95
Score: 3.7 Sequence: ATTCGTGATTGCTGTCGTAAAG
Locus tag: Salmonelentericaenterica_010100033539
|
||||
| Salmonelentericaenterica_010100033539 | -95 | 3.7 | ATTCGTGATTGCTGTCGTAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aldB | ||||
| Ortholog function: Aldehyde dehydrogenase B (EC 1.2.1.22) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3588 | -94 | 3.7 | ATTCGTGATAGCTGTCGTAAAG |
| Salmonella typhimurium LT2 | STM3680 | -95 | 3.7 | ATTCGTGATTGCTGTCGTAAAG |
| Citrobacter koseri ATCC BAA-895 | CKO_05043 | -94 | 3.6 | TATCGTGACCGCAGTCGTAAAG |
| Enterobacter sp. 638 | Ent638_0143 | -93 | 3.4 | ATCCGTGATTCCTGTCGTAAAG |
|
Position: -189
Score: 4.3 Sequence: ATGTCTGACGGAGTTCACACTT
Locus tag: Salmonelentericaenterica_010100033924
|
||||
| Salmonelentericaenterica_010100033924 | -189 | 4.3 | ATGTCTGACGGAGTTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompA | ||||
| Ortholog function: outer membrane protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0957 | -188 | 4 | ATGCCTGACGGAGTTCACACTT |
| Salmonella typhimurium LT2 | STM1070 | -188 | 4.3 | ATGTCTGACGGAGTTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02111 | -164 | 4 | ATGCCTGACGGAGTTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00986 | -185 | 3.9 | ATGCCTGACAGAGTTCACACTT |
| Enterobacter sp. 638 | Ent638_1469 | -189 | 4 | ATGCCTGACGGAGTTCACACTT |
| Serratia proteamaculans 568 | Spro_1754 | -195 | 3.8 | TTTTTAGAGCTTTATCACATCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1751 | -200 | 3.9 | TCTTATGACACAAATCACATCA |
| Edwardsiella tarda EIB202 | ETAE_1267 | -196 | 3.7 | TTTGGTGAGCATAATCACATCG |
|
Position: -302
Score: 3.4 Sequence: TAATTTGTTTTTATTCATTATT
Position: -157
Score: 4 Sequence: AAACGTGATTTCTGTAAAATTG
Position: -120
Score: 3.2 Sequence: TTTACTGATTTCAATCAAAACC
Locus tag: Salmonelentericaenterica_010100034169
|
||||
| Salmonelentericaenterica_010100034169 | -302 | 3.4 | TAATTTGTTTTTATTCATTATT | |
| -157 | 4 | AAACGTGATTTCTGTAAAATTG | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pdhR | ||||
| Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0113 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0151 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03260 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00117 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0659 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0746 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0766 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4012 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3790 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0658 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2047 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -153
Score: 4.1 Sequence: TTTTGTGAAATAGGTCACCGCT
Position: -92
Score: 3.7 Sequence: AATTTTGCTACGCACCACCATA
Locus tag: Salmonelentericaenterica_010100034579
|
||||
| Salmonelentericaenterica_010100034579 | -153 | 4.1 | TTTTGTGAAATAGGTCACCGCT | |
| -92 | 3.7 | AATTTTGCTACGCACCACCATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fxsA | ||||
| Ortholog function: suppressor of F plamsid exlusion of phage T7 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4140 | -202 | 4.1 | TACCGTAATCTGGATCACTTTA |
| -152 | 4.3 | ATTTGTGAAATAGATCACCGCT | ||
| Salmonella typhimurium LT2 | STM4327 | -203 | 4.1 | TACCGTAATCTGGATCACTTAA |
| -153 | 4.1 | TTTTGTGAAATAGGTCACCGCT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03695 | -156 | 4.1 | TTTTGTGAAATAGGTCACCGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04530 | -140 | 3.7 | ATCTGTGAAATGGGTCACCGCT |
| Enterobacter sp. 638 | Ent638_0327 | -151 | 3.8 | ATCTGTGAAATGAATCACCGCT |
| Erwinia amylovora ATCC 49946 | EAM_0417 | -161 | 3.9 | ATATCTGTTCCAGGTCACATTG |
| Yersinia pestis KIM | y0607 | -245 | 4.8 | ATCTGTGATTGCTCTCACACTT |
| Serratia proteamaculans 568 | Spro_0407 | -117 | 4.9 | TTCTGTGATCTCATTCACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0623 | -245 | 3.7 | AACTGTGATTGTAGTCACGAGT |
| -185 | 3.6 | AAATGTGCAAAGGCGCACCCAT | ||
| Edwardsiella tarda EIB202 | ETAE_0312 | -189 | 4.6 | ATCTGTGATAATACTCACAGAT |
| Proteus mirabilis HI4320 | PMI2545 | -188 | 4.7 | TTTTGTGATCTATCTCATGGAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4136 | -188 | 5.6 | ATATGTGATATTTATCACAATT |
|
Position: -54
Score: 4.2 Sequence: AGCGGTGACCTATTTCACAAAA
Position: -4
Score: 4.2 Sequence: TTAAGTGATCCAGATTACGGTA
Locus tag: Salmonelentericaenterica_010100034584
|
||||
| Salmonelentericaenterica_010100034584 | -54 | 4.2 | AGCGGTGACCTATTTCACAAAA | |
| -4 | 4.2 | TTAAGTGATCCAGATTACGGTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aspA | ||||
| Ortholog function: aspartate ammonia-lyase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4139 | -206 | 4.5 | AGCGGTGATCTATTTCACAAAT |
| -156 | 4.2 | TAAAGTGATCCAGATTACGGTA | ||
| Salmonella typhimurium LT2 | STM4326 | -209 | 4.2 | AGCGGTGACCTATTTCACAAAA |
| -159 | 4.2 | TTAAGTGATCCAGATTACGGTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03696 | -54 | 4.2 | AGCGGTGACCTATTTCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04529 | -204 | 3.9 | AGCGGTGACCCATTTCACAGAT |
| -154 | 3.8 | ATAAGTGATCAAGCTTACTGAT | ||
| Enterobacter sp. 638 | Ent638_0326 | -205 | 4.1 | AGCGGTGATTCATTTCACAGAT |
| Erwinia amylovora ATCC 49946 | EAM_0416 | -228 | 4.2 | CAATGTGACCTGGAACAGATAT |
| Yersinia pestis KIM | y0606 | -224 | 4.6 | AAGTGTGAGAGCAATCACAGAT |
| Serratia proteamaculans 568 | Spro_0406 | -205 | 4.7 | AAACGTGAATGAGATCACAGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0621 | -272 | 4 | ACTCGTGACTACAATCACAGTT |
| Edwardsiella tarda EIB202 | ETAE_0311 | -197 | 4.4 | ATCTGTGAGTATTATCACAGAT |
| Proteus mirabilis HI4320 | PMI2546 | -206 | 4.1 | ATCCATGAGATAGATCACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4137 | -274 | 3.8 | AGATATAATTGGGGTCACAGTT |
| -211 | 5.6 | AATTGTGATAAATATCACATAT | ||
|
Position: -147
Score: 4.3 Sequence: TTTTATGACGCAGTACACACAT
Locus tag: Salmonelentericaenterica_010100034604
|
||||
| Salmonelentericaenterica_010100034604 | -147 | 4.3 | TTTTATGACGCAGTACACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: facilitator for glycerol uptake | ||||
| Salmonella typhimurium LT2 | STM4087 | -147 | 3.9 | TTTATTGACGCAGTACACACAT |
|
Position: -105
Score: 4.4 Sequence: ATTTGTGATCGCACCCGCACTT
Locus tag: Salmonelentericaenterica_010100034884
|
||||
| Salmonelentericaenterica_010100034884 | -105 | 4.4 | ATTTGTGATCGCACCCGCACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ychH | ||||
| Ortholog function: membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1205 | -105 | 4.5 | AATTGTGATCACGCCCGCACAT |
| Salmonella typhimurium LT2 | STM1782 | -105 | 4.4 | ATTTGTGATCGCACCCGCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01260 | -104 | 4.1 | AATTGTGATCGCCCACGCACTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02241 | -100 | 4.1 | TAATGTGATCGTGGACGCACTC |
| Enterobacter sp. 638 | Ent638_2343 | -119 | 3.7 | TGTTGTGACGAGAGTCATTAAT |
| -101 | 4 | TAATGTGATCATTCACGCAACT | ||
| Erwinia amylovora ATCC 49946 | EAM_1581 | -97 | 3.9 | AAATGTGATCGCTGACTCATCA |
| Yersinia pestis KIM | y2296 | -145 | 3.9 | AGTTGTGATCGCTACCGCAACA |
| Serratia proteamaculans 568 | Spro_1985 | -117 | 4.2 | ATTTGTGATCGCCTACGCAATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2185 | -275 | 3.6 | TAGCGTGATTATGAGAACGCTA |
| -117 | 3.8 | ATCTGTGATCCCTCCCGCAATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2065 | -189 | 4.1 | AGTTGTGATCGTGTCCGCAATG |
|
Position: -238
Score: 4.8 Sequence: AAATGTAATACCCATCACACTT
Position: -171
Score: 3.8 Sequence: TGCCGCGATAGATCTCACACTT
Position: -120
Score: 4.1 Sequence: TTCTGTGGCGCAGATCACCTAT
Locus tag: Salmonelentericaenterica_010100035144
|
||||
| Salmonelentericaenterica_010100035144 | -238 | 4.8 | AAATGTAATACCCATCACACTT | |
| -171 | 3.8 | TGCCGCGATAGATCTCACACTT | ||
| -120 | 4.1 | TTCTGTGGCGCAGATCACCTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_03591 | ||||
| Ortholog function: hypothetical protein | ||||
| Salmonella typhimurium LT2 | STM4440 | -229 | 4.5 | AACTGTAATACCCATCACACTT |
| -162 | 3.8 | TGCCGCGATAGATCTCACACTT | ||
| -111 | 4.1 | TTCTGTGGCGCAGATCACCTAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04633 | -172 | 4.3 | TGTTGTGATACATCTCACGCCA |
| -121 | 4.2 | ATATGTGGAGTCGATCACCTAA | ||
| Enterobacter sp. 638 | Ent638_0424 | -265 | 3.8 | AAACCTTATCCGCGTCACACTT |
| -189 | 4.6 | TAGCGTGATATTCATCACGCAA | ||
| Erwinia amylovora ATCC 49946 | EAM_0469 | -156 | 3.8 | TGATGTGAGTTGTCTCGCTTTG |
|
Position: -271
Score: 4 Sequence: TTTTATGATCTCATTAGCATAG
Position: -131
Score: 4.9 Sequence: AAGTGTAATATCCATCACATAT
Locus tag: Salmonelentericaenterica_010100036288
|
||||
| Salmonelentericaenterica_010100036288 | -271 | 4 | TTTTATGATCTCATTAGCATAG | |
| -131 | 4.9 | AAGTGTAATATCCATCACATAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araE | ||||
| Ortholog function: sugar transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2841 | -131 | 4.4 | AATTGGAATATCCATCACATAA |
| Salmonella typhimurium LT2 | STM3016 | -271 | 4 | TTTTATGATCTCATTAGCATAG |
| -131 | 4.9 | AAGTGTAATATCCATCACATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03264 | -191 | 4.4 | AAGTTTAATGTCCATCACAAAA |
| Enterobacter sp. 638 | Ent638_3294 | -209 | 3.7 | CGAGATGACATCGATCACATTT |
| -130 | 4.1 | AATTGGAATATCCATCACAGAA | ||
|
Position: -115
Score: 3.9 Sequence: TTCTGTGATGAAGATCTATATT
Locus tag: Salmonelentericaenterica_010100036708
|
||||
| Salmonelentericaenterica_010100036708 | -115 | 3.9 | TTCTGTGATGAAGATCTATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glk | ||||
| Ortholog function: glucokinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2388 | -116 | 4.1 | TTGTGTGACCCAGATCGATATT |
| Salmonella typhimurium LT2 | STM2403 | -116 | 3.9 | TTCTGTGATGAAGATCTATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_00412 | -116 | 4.5 | TTATGTGATGCAGATCGATATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02738 | -117 | 4.4 | AAATGTGACCTGTGTCGCTAAA |
| Enterobacter sp. 638 | Ent638_2921 | -116 | 3.8 | TTCTGTGACGAAGATCGATTAT |
| Yersinia pestis KIM | y1505 | -113 | 4.7 | TTATGAGATGTCAGTCACAAAA |
| Serratia proteamaculans 568 | Spro_3407 | -116 | 4.8 | TTTTGTGATCCGGATCGCTAAT |
|
Position: -116
Score: 4.4 Sequence: AAACGTGATTTCGTACACATCT
Locus tag: Salmonelentericaenterica_010100037480
|
||||
| Salmonelentericaenterica_010100037480 | -116 | 4.4 | AAACGTGATTTCGTACACATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiS | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0819 | -116 | 4.7 | AAATGTGATTTCGTACACATCT |
| Salmonella typhimurium LT2 | STM0837 | -116 | 4.4 | AAACGTGATTTCGTACACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_02299 | -202 | 3.8 | ATATGTGACAAACCGCTTATTA |
| -116 | 4.7 | AAATGTGATTTCGTACACATCT | ||
| Enterobacter sp. 638 | Ent638_1310 | -119 | 4.7 | AAATGTGATTTCGTACACATCT |
|
Position: 19
Score: 3.3 Sequence: TATTCTGCAGGACATCGCCAAA
Locus tag: Salmonelentericaenterica_010100037685
|
||||
| Salmonelentericaenterica_010100037685 | 19 | 3.3 | TATTCTGCAGGACATCGCCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pulE | ||||
| Ortholog function: conserved protein with nucleoside triphosphate hydrolase domain | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0107 | -145 | 3.2 | CTTCGTAACGCCTCGCAAATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03269 | -146 | 3.4 | TTTTTCGAGCGGCCTCGCAAAC |
| Yersinia pestis KIM | y0760 | -123 | 3.8 | TTACGTTATTGCAATAACCTAA |
| Proteus mirabilis HI4320 | PMI2050 | -146 | 4.3 | TAATGCGAACTTGCTCTCAATA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3639 | -227 | 4.1 | AAATGTGAATCGACAAACAATT |
| -182 | 3.2 | ATATTTGAATTTTAATTCATTA | ||
|
Position: -161
Score: 3.6 Sequence: AACTCTCATCCAGATCACGTTT
Position: -92
Score: 4 Sequence: TTTTGTGGCGTTAATCACGGTT
Locus tag: Salmonelentericaenterica_010100038010
|
||||
| Salmonelentericaenterica_010100038010 | -161 | 3.6 | AACTCTCATCCAGATCACGTTT | |
| -92 | 4 | TTTTGTGGCGTTAATCACGGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lsrR | ||||
| Ortholog function: LsrR, transcriptional repressor of lsr operon | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1512 | -87 | 4.1 | AACTGTGGTTGCCATCACAGAT |
| Salmonella typhimurium LT2 | STM4073 | -161 | 3.6 | AACTCTCATCCAGATCACGTTT |
| -92 | 4 | TTTTGTGGCGTTAATCACGGTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03508 | -75 | 3.7 | TTTTGCCAGTCGGCTCACACTT |
| Enterobacter sp. 638 | Ent638_3537 | -122 | 3.4 | TTTATTGATTAGGATCCAATTC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3142 | -137 | 4.3 | AATTGTGATCTTGGCAATATTT |
|
Position: -78
Score: 3.7 Sequence: TAATTTATTACATGTCACACTT
Locus tag: Salmonelentericaenterica_010100038640
|
||||
| Salmonelentericaenterica_010100038640 | -78 | 3.7 | TAATTTATTACATGTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galE2 | ||||
| Ortholog function: UDP-galactose-4-epimerase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0759 | -78 | 3.8 | TAATTTATTCCATGTCACACTT |
| Salmonella typhimurium LT2 | STM0776 | -78 | 3.7 | TAATTTATTACATGTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02376 | -36 | 3.7 | TAATATATTCCATGTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00773 | -78 | 3.7 | TAACTTGTGCTATGTCACACTT |
| -44 | 4.1 | ATATGCTATCTTCCTCACAAAC | ||
| Yersinia pestis KIM | y3043 | -163 | 3.7 | TTATTTGTCTATGCTCACAGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1389 | -72 | 3.7 | ATTCTCGCTGTAGATCACCTTT |
| Edwardsiella tarda EIB202 | ETAE_2564 | -195 | 3.7 | TAGTGTAAGCGATACCACAAAC |
|
Position: -323
Score: 4.6 Sequence: TCATGTGAAGAGGATCACAAAA
Position: -279
Score: 5.1 Sequence: AAGTGTGAAATATCTCACATAA
Position: -206
Score: 5.2 Sequence: CTTTGTGATCAATATCACATAA
Position: -163
Score: 5.4 Sequence: TTATGTGACGCAAATCACATAA
Locus tag: Salmonelentericaenterica_010100039410
|
||||
| Salmonelentericaenterica_010100039410 | -323 | 4.6 | TCATGTGAAGAGGATCACAAAA | |
| -279 | 5.1 | AAGTGTGAAATATCTCACATAA | ||
| -206 | 5.2 | CTTTGTGATCAATATCACATAA | ||
| -163 | 5.4 | TTATGTGACGCAAATCACATAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3599 | -206 | 4.5 | TTTTGTGATGAACGTCACGTCA |
| -162 | 5.4 | TTATGTGATTGATATCACACAA | ||
| -113 | 3.3 | TTCAGTGCCAGATTTCGCAGTA | ||
| Salmonella typhimurium LT2 | STM3685 | -207 | 4.8 | CTTTGTGATCAATATCACATCA |
| -163 | 5.4 | TTATGTGACGCAAATCACATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05054 | -203 | 5.2 | TTTTGTGATCAATATCACATCA |
| -159 | 5 | TCATGTGATCCAAATCACACAA | ||
| -110 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03942 | -208 | 4.9 | TTTTGTGATCATCATCACTAAA |
| -164 | 5.2 | TCATGTGATCCAAATCACATAA | ||
| -115 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Enterobacter sp. 638 | Ent638_0136 | -224 | 3.4 | TATTTTTTTCATACTCTCATTT |
| -205 | 4.8 | TTTTGTGATGGCGATCACCTCA | ||
| -161 | 5.1 | TTGCGTGATGCAGATCACACAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3416 | -229 | 3.3 | CATTGCGAATATCTTTACACTT |
| -210 | 3.9 | CTTCGTGACTCATGTCACTAAA | ||
| -166 | 4.8 | TTAAGTGACCCGCATCACACTT | ||
| -95 | 3.2 | CGTTTTGATCGTGATCCCTCAA | ||
| -34 | 3.5 | ACATGAGATTTGCATCATTAAT | ||
| Yersinia pestis KIM | y4087 | -223 | 4.6 | AGATGTGATCTTAATCAACAAA |
| -179 | 4.5 | TTGTGTGACTTTCGTCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0072 | -195 | 5.2 | AAATGTGATGTATATCACTATA |
| -151 | 4.5 | GTTGGTGATCTGCATCACAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0087 | -230 | 5.1 | TTTTGTGAAGTAAATCACCTAT |
| -186 | 4.5 | TTGTGTGATTTTTGTCACGTTG | ||
|
Position: -116
Score: 4.4 Sequence: TAATGTTATACATATCACTCTA
Locus tag: Salmonelentericaenterica_010100039575
|
||||
| Salmonelentericaenterica_010100039575 | -116 | 4.4 | TAATGTTATACATATCACTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpD | ||||
| Ortholog function: glycerol-3-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3426 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Salmonella typhimurium LT2 | STM3526 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04845 | -116 | 4.5 | TAATGTTATATGTATCACTCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03792 | -119 | 3.7 | ATATGTTACACCCATCACTTCA |
| -58 | 3.7 | TATAGTGAGCGATATCGAGCAT | ||
| Enterobacter sp. 638 | Ent638_3835 | -116 | 4.4 | TTATGTTATCTCTATCACTCAA |
| -55 | 4 | TATTATGAGCGATATCGAACAT | ||
| Erwinia amylovora ATCC 49946 | EAM_3265 | -124 | 4 | AGACGTTATCGGCATCACGCAT |
| Yersinia pestis KIM | y3891 | -129 | 4.4 | AAATGTTACCTCCATCACGCAT |
| Serratia proteamaculans 568 | Spro_4642 | -129 | 3.6 | AACTGTTACCTCTATCACGCCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4141 | -144 | 4.3 | TAATGTGACAACTATCATCATA |
| -124 | 4.4 | TATTGTTAGCTTCATCACGCAT | ||
| Edwardsiella tarda EIB202 | ETAE_3312 | -124 | 4.3 | TTGTGTTATCCGCATCGCGTAA |
| Proteus mirabilis HI4320 | PMI2930 | -129 | 4.4 | AATTGTTATTTATATCACGCAG |
|
Position: -293
Score: 3.9 Sequence: TTATGTGATCTCACGCAGCGTT
Position: -149
Score: 3.9 Sequence: AAACGTGAAGTTAATCACTTCA
Locus tag: Salmonelentericaenterica_010100042594
|
||||
| Salmonelentericaenterica_010100042594 | -293 | 3.9 | TTATGTGATCTCACGCAGCGTT | |
| -149 | 3.9 | AAACGTGAAGTTAATCACTTCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaT | ||||
| Ortholog function: L-rhamnose-proton symport | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3907 | -145 | 4.1 | AGATGTGAAGCAAATCACCCAC |
| Salmonella typhimurium LT2 | STM4050 | -293 | 3.6 | TTATGTGACCTCACGCAGCGTT |
| -149 | 3.9 | AAACGTGAAGTTAATCACTTCA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03094 | -148 | 4.1 | ATATGTGAGCCAAATCACCCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04216 | -149 | 4.7 | TTTTGTGATGTAGAACAACTAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0450 | -193 | 3.6 | TTTTGTGATCCTGCCTATATCA |
|
Position: -65
Score: 3.9 Sequence: TAATGTATTTTTATTCATAATT
Locus tag: Salmonelentericaenterica_010100044865
|
||||
| Salmonelentericaenterica_010100044865 | -65 | 3.9 | TAATGTATTTTTATTCATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argE | ||||
| Ortholog function: acetylornithine deacetylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3957 | -66 | 3.7 | TAGTGTATTTTTATTCATAAAT |
| Salmonella typhimurium LT2 | STM4120 | -66 | 3.9 | TAATGTATTTTTATTCATAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03037 | -27 | 4.3 | TAATGTATTTTTATTCACAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04246 | -27 | 4 | TATTGTATTTTTATTCAAAATA |
| Enterobacter sp. 638 | Ent638_4029 | -66 | 4.2 | TAGTGTATTTTTATTCACATTT |
| Erwinia amylovora ATCC 49946 | EAM_0137 | -66 | 3.8 | TATTGTATTTTTATTCACTATT |
| Yersinia pestis KIM | y0309 | -223 | 3.6 | TATTTTTATTTATGTCAATAAA |
| Serratia proteamaculans 568 | Spro_4782 | -71 | 4.3 | TATTGTATTTTTATTCACAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0191 | -65 | 4 | TATTGTATTTTTATTCAAAATA |
| Edwardsiella tarda EIB202 | ETAE_3483 | -65 | 3.9 | TATTGTATTTTTATTCATAATT |
| Proteus mirabilis HI4320 | PMI3236 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4745 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
|
Position: -145
Score: 4 Sequence: TTGTGCGAGTCAGCTCAAACTT
Locus tag: Salmonelentericaenterica_010100044970
|
||||
| Salmonelentericaenterica_010100044970 | -145 | 4 | TTGTGCGAGTCAGCTCAAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: C4-dicarboxylate transport protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3528 | -143 | 4.1 | TTGTGCGAGCCAGCTCAAACTT |
| Salmonella typhimurium LT2 | STM3614 | -145 | 4.1 | TTGTGCGAGCCAGCTCAAACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04970 | -145 | 4 | TTGTGCGAGCCAGCTCAAAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03878 | -143 | 3.9 | TTGTGCGAGTCAGCTCAAAGAT |
| Erwinia amylovora ATCC 49946 | EAM_3380 | -134 | 4.4 | TGAAGTGATTCAGCTCATAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4362 | -157 | 3.8 | TGACGTGATTCAGCTCTTGTTT |
| Edwardsiella tarda EIB202 | ETAE_3379 | -155 | 3.6 | TTATGCGTTTCAGCTCATAGAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3205 | -176 | 4.9 | TTATGTGATCTATATCTTAAAA |
|
Position: -250
Score: 4.2 Sequence: GAATGTGATCAATTTAAAAATT
Locus tag: Salmonelentericaenterica_010100046215
|
||||
| Salmonelentericaenterica_010100046215 | -250 | 4.2 | GAATGTGATCAATTTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0002 | -83 | 3.8 | TTTATTGACTTAGGTCACTAAA |
| Salmonella typhimurium LT2 | STM0002 | -103 | 4.2 | GAATGTGATCAATTTAAAAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03385 | -249 | 4.1 | GAATGTGATCAAATTAAAAATT |
| Enterobacter sp. 638 | Ent638_0564 | -252 | 4.4 | AATTGTGATCAAATTAGAAATT |
| Proteus mirabilis HI4320 | PMI0001 | -232 | 3.9 | AAATTTGACATCTCTCTCGCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0563 | -223 | 4.2 | ATGTTTGACTTTGCGCACAAAT |
|
Position: -78
Score: 4.4 Sequence: AGATATGATCTATATCAAATTC
Locus tag: Salmonelentericaenterica_010100046875
|
||||
| Salmonelentericaenterica_010100046875 | -78 | 4.4 | AGATATGATCTATATCAAATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: focA | ||||
| Ortholog function: formate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0904 | -156 | 3.6 | TATTTTTATTTGGATAATCAAA |
| -78 | 3.8 | AGATATGATCTATATCAATTTC | ||
| Salmonella typhimurium LT2 | STM0974 | -78 | 4.4 | AGATATGATCTATATCAAATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_02167 | -198 | 3.6 | TATTTTTATTTGGATAATCAAA |
| -120 | 4.4 | AGATATGATCTATATCAAATTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00932 | -121 | 3.8 | AGATATGATCTATATCAATTTC |
| Enterobacter sp. 638 | Ent638_1424 | -78 | 3.8 | AGATATGATCTATATCAATTTC |
| Yersinia pestis KIM | y2789 | -84 | 4 | CAATATGATCCATATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2596 | -79 | 4.5 | CAATATGATCCACATCAAATTT |
| Proteus mirabilis HI4320 | PMI0706 | -188 | 4 | TTTTTTGATAAAATTTAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1614 | -88 | 4.7 | AATTATGATCTATATCAAATTC |
|
Position: -159
Score: 3.1 Sequence: TACATTGACGTACTGCATGTAT
Locus tag: Salmonelentericaenterica_010100047997
|
||||
| Salmonelentericaenterica_010100047997 | -159 | 3.1 | TACATTGACGTACTGCATGTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: cyclic AMP receptor protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3357 | -154 | 3.3 | TACATTGATGTACTGCATGTAT |
| -136 | 3.3 | GTATGCAAAGGACGTCACATTA | ||
| Salmonella typhimurium LT2 | STM3466 | -159 | 3.1 | TACATTGACGTACTGCATGTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04777 | -160 | 3.1 | TACATTGACGTACTGCATGTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03743 | -158 | 3.3 | TACATTGATGTACTGCATGTAT |
| Enterobacter sp. 638 | Ent638_3784 | -128 | 2.9 | AAACATTACAGGCTGCAAACAT |
| Yersinia pestis KIM | y3956 | -309 | 3 | AATTTAGACTACCCTTTCATTT |
| Serratia proteamaculans 568 | Spro_4580 | -121 | 3.5 | ATTTATGACACGCCTCAAAACC |
| Proteus mirabilis HI4320 | PMI2820 | -135 | 3.3 | TATTATAATCTATTCCTTATTA |
|
Position: -138
Score: 3.7 Sequence: TGTTGTGATCATCCTCTTTTTT
Locus tag: Salmonelentericaenterica_010100048172
|
||||
| Salmonelentericaenterica_010100048172 | -138 | 3.7 | TGTTGTGATCATCCTCTTTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aphA | ||||
| Ortholog function: acid phosphatase/phosphotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4055 | -130 | 3.6 | CATCCTGCTTTTCATCACAAAA |
| -57 | 4 | TTTTGCAACAAATCTCACAATA | ||
| Salmonella typhimurium LT2 | STM4249 | -139 | 3.7 | TGTTGTGATCATCCTCTTTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03845 | -255 | 3.9 | TATTGTGAATGCGTGTACAGAA |
| -224 | 3.7 | GTGTGTGTGGTTTATCACACAT | ||
| Enterobacter sp. 638 | Ent638_0259 | -57 | 3.8 | TTTTTTGACCATTCGCTCAATT |
| Edwardsiella tarda EIB202 | ETAE_3469 | -150 | 5 | TTTTGTGATGAATGTCACGTAT |
| -98 | 3.7 | AACATAGATCATGATCACATTA | ||
| Proteus mirabilis HI4320 | PMI0729 | -148 | 4.3 | AAGTGTTAGATAGATCAAAAAA |
| -87 | 4.3 | TAACGTGCGCTATATCTCATTT | ||
| -34 | 4.3 | TTCTGTGATTAATATAAAAATT | ||
|
Position: -262
Score: 4.6 Sequence: ATGTGTGATCTGGTGCACGCTT
Position: -211
Score: 4.1 Sequence: TTTTGTACGATCGTTCACACTT
Locus tag: Salmonelentericaenterica_010100048546
|
||||
| Salmonelentericaenterica_010100048546 | -262 | 4.6 | ATGTGTGATCTGGTGCACGCTT | |
| -211 | 4.1 | TTTTGTACGATCGTTCACACTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpI | ||||
| Ortholog function: ATP synthase subunit I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3739 | -263 | 4.8 | ATATGTGATCTGAAGCACGCTT |
| Salmonella typhimurium LT2 | STM3872 | -262 | 4.6 | ATGTGTGATCTGGTGCACGCTT |
| -211 | 4.1 | TTTTGTACGATCGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00079 | -262 | 4.7 | ATATGTGATCCGAAGCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04144 | -262 | 4.7 | TTATGTGATCTGATGCACGCTT |
| Enterobacter sp. 638 | Ent638_4125 | -261 | 4.8 | TTTTGTGATCTCGTGCACGCTT |
| Erwinia amylovora ATCC 49946 | EAM_3481 | -264 | 4.4 | ATTTGTGATCGTGGACACGCTT |
| Yersinia pestis KIM | y4142 | -263 | 5.4 | TTATGTGATGTATTTCACGTTT |
| Serratia proteamaculans 568 | Spro_0001 | -265 | 4.4 | TATTGTGAGCAACTACACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4519 | -254 | 5 | TTATGTGAGTCACATCACAGAT |
| Edwardsiella tarda EIB202 | ETAE_3526 | -297 | 3.7 | AATCGTGAAAATATTTAAATTA |
| Proteus mirabilis HI4320 | PMI3057 | -259 | 5 | TTGTGTGTTCTAGATCACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0047 | -265 | 5.7 | TTATGTGATTTAAATCACATTT |
|
Position: 0
Score: 4 Sequence: ATGTTTGATAAACGTCACCGTA
Locus tag: Salmonelentericaenterica_010100048676
|
||||
| Salmonelentericaenterica_010100048676 | 0 | 4 | ATGTTTGATAAACGTCACCGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylR | ||||
| Ortholog function: Xylose activator XylR (AraC family) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3569 | -253 | 4.2 | AAGTGTGCGCTCGCTCGCAAAA |
| -163 | 3.7 | AAGTAAGATCTCGGTCATAAAT | ||
| Salmonella typhimurium LT2 | STM3662 | -251 | 4.8 | AAATGTGCTCTGGCTCTCAAAA |
| -124 | 4.5 | TGCTGTGATGAATTTCGCATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05026 | -254 | 4.1 | AAGTGTGCGCCGCCTCGCAAAA |
| -162 | 3.8 | AAGTACGATCTCGGTCATAATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03933 | -234 | 3.8 | AAATACGATCGCCGTCATAATT |
| Enterobacter sp. 638 | Ent638_0152 | -264 | 3.9 | AAACGTGCGCTGGCTCCCAAAA |
| Yersinia pestis KIM | y4053 | -264 | 4.8 | AATTGTGGTGTAGATCTCATAA |
| -160 | 4.2 | AAACATGATCGTTATCATAAAA | ||
| Serratia proteamaculans 568 | Spro_0102 | -259 | 4.4 | AAATGTGCGACAGATCTCATAA |
| -166 | 3.7 | AAGCATGACCGCCATCATAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0101 | -272 | 4.5 | AAATATGACCCGCATCAAAAAA |
| Proteus mirabilis HI4320 | PMI1276 | -93 | 4.9 | TTGTGTGATAGTAATCACATAG |
|
Position: -164
Score: 4 Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: Salmonelentericaenterica_010100048936
|
||||
| Salmonelentericaenterica_010100048936 | -164 | 4 | AGGTGTTAAATTGATCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cyaA | ||||
| Ortholog function: Adenylate cyclase (EC 4.6.1.1) | ||||
| Salmonella typhimurium LT2 | STM3939 | -164 | 4 | AGGTGTTAAATTGATCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00148 | -174 | 4 | AGGTGTTAAATTGATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04305 | -147 | 4 | AGGTGTTAAATTGATCACGTTT |
|
Position: -213
Score: 4.2 Sequence: AAACGTGATCAATTTAACACCT
Locus tag: Salmonelentericaenterica_010100048941
|
||||
| Salmonelentericaenterica_010100048941 | -213 | 4.2 | AAACGTGATCAATTTAACACCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemC | ||||
| Ortholog function: porphobilinogen deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3805 | -236 | 4.2 | AAACGTGATCAATTTAACACCT |
| Salmonella typhimurium LT2 | STM3938 | -219 | 4.2 | AAACGTGATCAATTTAACACCT |
| Citrobacter koseri ATCC BAA-895 | CKO_00147 | -220 | 4.2 | AAACGTGATCAATTTAACACCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04304 | -232 | 4.2 | AAACGTGATCAATTTAACACCT |
| Enterobacter sp. 638 | Ent638_3987 | -211 | 4.2 | AAACGTGATCAATCTAACACCT |
| Serratia proteamaculans 568 | Spro_0178 | -223 | 4.2 | AAACGTGATCAATCTAACACCT |
| Edwardsiella tarda EIB202 | ETAE_0118 | -205 | 4.2 | AAACGTGATCAATTTAACACCT |
|
Position: -76
Score: 3.4 Sequence: GAATTTGATTTACATCAATAAG
Locus tag: Salmonelentericaenterica_010100048991
|
||||
| Salmonelentericaenterica_010100048991 | -76 | 3.4 | GAATTTGATTTACATCAATAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nirB | ||||
| Ortholog function: nitrite reductase (NAD(P)H) subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3365 | -124 | 3.2 | AAAATTTATACAAATCAGCAAT |
| -76 | 3.4 | GAATTTGATTTACATCAATAAG | ||
| Salmonella typhimurium LT2 | STM3474 | -76 | 3.4 | GAATTTGATTTACATCAATAAG |
| Citrobacter koseri ATCC BAA-895 | CKO_04789 | -76 | 3.4 | GAATTTGATTTACATCAATAAG |
| Enterobacter sp. 638 | Ent638_3793 | -76 | 3.3 | GTATTTGATTTGCATCAATAAG |
| Yersinia pestis KIM | y3945 | -75 | 3.7 | CAAATTGATTTACATCAAGAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4079 | -186 | 4.2 | AAGCGTGCTATAGATCTCACTT |
| Proteus mirabilis HI4320 | PMI1479 | -129 | 3.5 | TTTTGTGCACTTTATTAACAAT |
|
Position: -92
Score: 4.5 Sequence: CTTTGTGATAAAACTCACTTTT
Locus tag: Salmonelentericaenterica_010100049051
|
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| Salmonelentericaenterica_010100049051 | -92 | 4.5 | CTTTGTGATAAAACTCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqeF | ||||
| Ortholog function: Acetyl-CoA acetyltransferase (EC 2.3.1.9) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2844 | -91 | 4.6 | CTTTGTGATAAAAATCACTTTT |
| Salmonella typhimurium LT2 | STM3019 | -92 | 4.5 | CTTTGTGATAAAACTCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04222 | -92 | 4.6 | CTTTGTGATAAAACTCACCATT |
|
Position: -176
Score: 4.2 Sequence: ATTTGAGATCGGGATCACTGAT
Locus tag: Salmonelentericaenterica_010100049301
|
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| Salmonelentericaenterica_010100049301 | -176 | 4.2 | ATTTGAGATCGGGATCACTGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdaC | ||||
| Ortholog function: Serine transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2796 | -179 | 4.2 | ATTTGAGATCAAGATCACTGAT |
| Salmonella typhimurium LT2 | STM2970 | -176 | 4.2 | ATTTGAGATCGGGATCACTGAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04152 | -176 | 4.1 | ATTTGGGATCGCGATCACTGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03139 | -158 | 4.2 | ATTTGAGATCGCGATCACTGAT |
| Enterobacter sp. 638 | Ent638_3249 | -176 | 4.1 | ATTTGGGATCAGGATCACTGAT |
| Erwinia amylovora ATCC 49946 | EAM_1294 | -300 | 3.6 | ATTTGTTAAAAATCGCAAAAAA |
| -180 | 3.9 | AAATGTGATTCCGATCACCGGC | ||
| Yersinia pestis KIM | y2862 | -286 | 4.3 | AATTGAGATCACGATCACGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3158 | -195 | 3.7 | TTCTGTGATCGCCTCAATATTA |
| Proteus mirabilis HI4320 | PMI0672 | -283 | 4.3 | ATTTGAGATGGTGATCACGGTA |
|
Position: -42
Score: 4.5 Sequence: AATTGTGACAATTGTCATATTA
Locus tag: Salmonelentericaenterica_010100049906
|
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| Salmonelentericaenterica_010100049906 | -42 | 4.5 | AATTGTGACAATTGTCATATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yegH | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2063 | -43 | 4.6 | AATTGTGACATTTGTCATACAA |
| Salmonella typhimurium LT2 | STM2119 | -42 | 4.5 | AATTGTGACAATTGTCATATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00719 | -42 | 4.5 | AATTGTGACAACTGTCATATAA |
| Enterobacter sp. 638 | Ent638_2677 | -42 | 4.4 | AAGTGTGACAAATGTCATATAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1559 | -193 | 3.9 | ATTTGTTAATGTGATCACATGT |
|
Position: -71
Score: 3.9 Sequence: TTTTGTGGTATGGTTTAAACAT
Locus tag: Salmonelentericaenterica_010100049911
|
||||
| Salmonelentericaenterica_010100049911 | -71 | 3.9 | TTTTGTGGTATGGTTTAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroF | ||||
| Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase | ||||
| Salmonella typhimurium LT2 | STM2670 | -71 | 3.9 | TTTTGTGGTATGGTTTAAACAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02923 | -159 | 3.8 | TATTGTTATACGCATCGCGCCA |
| Edwardsiella tarda EIB202 | ETAE_2837 | -117 | 3.8 | ATGTACGATATTGTTTACATAT |
| Proteus mirabilis HI4320 | PMI0387 | -214 | 4.5 | TTATTTTATCTTAGTCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1262 | -262 | 3.6 | TGTTTTGATATTGATTTTATTT |