Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Salmonella enterica subsp. enterica serovar Typhi str. 404ty

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Orthologous TF(s) Salmonelentericaenterica_010100047997, Salmonelentericaenterica_010100025013
Regulated genes 173
Built upon 2301 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Locus tag Position Score Sequence
Position: -108
Score: 4.2
Sequence: ATTTGTGATCGTCGCCGCGTTT
Locus tag: Salmonelentericaenterica_010100000185
Salmonelentericaenterica_010100000185 -108 4.2 ATTTGTGATCGTCGCCGCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treB
Ortholog function: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b4240 -101 3.8 AATTGTGATCTTCGCTGCGTTT
Citrobacter koseri ATCC BAA-895 CKO_03571 -156 3.8 ATTTGTGATCTTCGCTGCGTTT
Enterobacter sp. 638 Ent638_0439 -106 4 TATTGTGATCTTCACCCGATTT
Serratia proteamaculans 568 Spro_0529 -124 3.8 TTTTGTGATCCTCGCCCCAAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu3288 -127 4.3 CAATGTGATCTTCAACCCATTT
Position: -103
Score: 5.3
Sequence: AAATGTGACTAATATCACATTA
Locus tag: Salmonelentericaenterica_010100001011
Salmonelentericaenterica_010100001011 -103 5.3 AAATGTGACTAATATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: b1963
Ortholog function: orf, hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1963 -287 4.6 TGGTGTGATCAGGCGCACATTA
Salmonella typhimurium LT2 STM1994 -70 5.5 AAATGTGATTAATATCACATTA
-34 4.4 TCATATGACTTACATCACAAAA
Position: -164
Score: 4
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -104
Score: 3.6
Sequence: AGATGTTAGTTATCTATCAATT
Locus tag: Salmonelentericaenterica_010100001576
Salmonelentericaenterica_010100001576 -164 4 AAATTTGAAGCAGTTAACGCTA
-104 3.6 AGATGTTAGTTATCTATCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpS
Ortholog function: ATP-dependent Clp protease adaptor protein
Escherichia coli str. K-12 substr. MG1655 b0881 -164 4 AAATTTGAAGCAGTTAACGCTA
Salmonella typhimurium LT2 STM0944 -164 4 AAATTTGAAGCAGTTAACGCTA
-104 3.6 AGATGTTAGTTATCTATCAATT
Citrobacter koseri ATCC BAA-895 CKO_02199 -164 4 AAATTTGAAGCAGTTAACGCTA
-135 4.2 TAATGTGACAGATGTCGCGGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00914 -167 4 AAATTTGAAGCAGTTAACGCTA
-77 4.3 ATTTGTGATGAGCATAACCTCT
Enterobacter sp. 638 Ent638_1398 -161 3.9 ATTTTTGAAGCAGTTAACGCTA
-132 3.8 GAATGTGACAGATATCGCGGAT
Erwinia amylovora ATCC 49946 EAM_1320 -161 4 AAATTTGAAGCAGTTAACGCTA
-132 4.5 TTTTGTGATAGAGGTCGCTATT
Serratia proteamaculans 568 Spro_1673 -176 3.6 AAGTTTGAAGCAGGTAACGCTA
Edwardsiella tarda EIB202 ETAE_2208 -164 3.8 AAGTTTGAGGCAGTTAACGCAA
-144 3.6 AATTGTGCGGCAGTGCGCTTTT
Proteus mirabilis HI4320 PMI0689 -268 3.7 TGTCTTTATTTACTTAACATTA
-148 4.1 AACTTTGATGTAGCTAACGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1593 -170 4.3 AAGTTTGATATAGATAACGATA
Position: -102
Score: 4.1
Sequence: GATTGCGAGGTTGCTCACAAAA
Locus tag: Salmonelentericaenterica_010100001731
Salmonelentericaenterica_010100001731 -102 4.1 GATTGCGAGGTTGCTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sbmC
Ortholog function: DNA gyrase inhibitor
Escherichia coli str. K-12 substr. MG1655 b2009 -93 3.5 GAGTGCGAGTCTGCTCGCATAA
Salmonella typhimurium LT2 STM2061 -102 4.1 GATTGCGAGGTTGCTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_00775 -219 3.5 GAGTGCGAGTCTGCTCACATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02467 -88 3.6 CTCTGTGAATTCGCGCACATAC
Enterobacter sp. 638 Ent638_2577 -97 3.6 TCGTGCGAGTCTGCTCGCATAA
-65 3.6 ATATTTGCTGCACATAAAGAAT
Position: -237
Score: 4.9
Sequence: TATGGTGACGTGCTTCACATAT
Locus tag: Salmonelentericaenterica_010100002076
Salmonelentericaenterica_010100002076 -237 4.9 TATGGTGACGTGCTTCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycgB
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1188 -235 4.4 TATGGTGAGCTGGCTCACATCT
Salmonella typhimurium LT2 STM1804.S -243 4.9 TATGGTGACGTGCTTCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02310 -174 4 TATGGTGACTTAACTCACAGCA
Enterobacter sp. 638 Ent638_2364 -236 4.2 TATGGTGACTTACCTCACACCT
Position: -300
Score: 4.2
Sequence: TATCGTGACCTGTGTCACTGTT
Locus tag: Salmonelentericaenterica_010100002697
Salmonelentericaenterica_010100002697 -300 4.2 TATCGTGACCTGTGTCACTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Enterobacter sp. 638 Ent638_1222 -295 4.2 TATCGTGACTGTGATCACTGTT
Erwinia amylovora ATCC 49946 EAM_1168 -249 4.4 AAGTGTGATTTTTGTCACTGTT
-190 3.6 TAATGAGATTGTGATCCACTTA
Yersinia pestis KIM y3071 -254 4.5 AATCGTGATCCTAATCACTGTT
Serratia proteamaculans 568 Spro_1263 -253 4.3 ATCCGTGATCTAAATCACTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1357 -265 4.7 ATTCGTGATCTAAATCACTGTT
Edwardsiella tarda EIB202 ETAE_2588 -261 3.7 ATGCGTGACCGTTGTCACTGTT
Proteus mirabilis HI4320 PMI0565 -264 4.3 AAAAGTGATCCCTCTCACTGTT
Position: -213
Score: 5
Sequence: AAATGTGATGCAGGTCAGATAA
Locus tag: Salmonelentericaenterica_010100003575
Salmonelentericaenterica_010100003575 -213 5 AAATGTGATGCAGGTCAGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: epd
Ortholog function: D-erythrose 4-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2927 -213 4.7 AAGTGTGATGTGAGTCAGATAA
Salmonella typhimurium LT2 STM3070 -213 5 AAATGTGATGCAGGTCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_04297 -213 4.8 AAGTGTGATGCAGGTCAGATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03356 -213 4.8 AAATGTGATGTGAGTCATATAG
Enterobacter sp. 638 Ent638_3340 -215 4.5 AAATGTGACGCAAGTCATATAG
Erwinia amylovora ATCC 49946 EAM_2813 -208 4.1 TTTTGTGACGCAGATCGAAAGT
Yersinia pestis KIM y3309 -216 3.7 AATTGTGCCCTTTTTCAGGGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3913 -194 4.1 TTTTATGACGCAGGTCACTCTT
Edwardsiella tarda EIB202 ETAE_2958 -233 4.9 AATTGTGATGCAATGCACGTTT
Proteus mirabilis HI4320 PMI0241 -253 4.4 AAATGTTAACAAGAGCACATTT
Position: -37
Score: 3.6
Sequence: AAAATTGATTTATTGCATCTAT
Locus tag: Salmonelentericaenterica_010100003907
Salmonelentericaenterica_010100003907 -37 3.6 AAAATTGATTTATTGCATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfeR
Ortholog function: transcriptional regulator, LysR family
Salmonella typhimurium LT2 STM2424 -37 3.6 AAAATTGATTTATTGCATCTAT
Citrobacter koseri ATCC BAA-895 CKO_00385 -37 3.6 AAAATTGATTTATTGCATCTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02755 -112 3.6 AAAATTGATTTATTGCATCTAT
Erwinia amylovora ATCC 49946 EAM_2384 -33 3.7 TTAATTTATTGAATTCATATAT
Serratia proteamaculans 568 Spro_3441 -33 3.6 TTGATTTATTTAATTCATATAT
Position: -153
Score: 4
Sequence: TAAAATGAACCATATCGCAAAA
Position: -123
Score: 4.2
Sequence: ATATTAGATGGAAATCACATAG
Locus tag: Salmonelentericaenterica_010100005167
Salmonelentericaenterica_010100005167 -153 4 TAAAATGAACCATATCGCAAAA
-123 4.2 ATATTAGATGGAAATCACATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: dsdX
Ortholog function: DsdX permease
Escherichia coli str. K-12 substr. MG1655 b2365 -154 4.4 TAAAGTGAACCATATCTCAATT
Salmonella typhimurium LT2 STM3801 -153 4 TAAAATGAACCATATCGCAAAA
-123 4.2 ATATTAGATGGAAATCACATAG
Citrobacter koseri ATCC BAA-895 CKO_00020 -124 4 TTATTGGATGCAAATCACCCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04080 -152 4.3 TAATTTGACCCATAGCATATTT
-122 3.7 CTTTTAGAGCTAAATCACCTTT
Position: -127
Score: 3.8
Sequence: TGATGTAAATTGAATCAACTAT
Position: -109
Score: 4.5
Sequence: CTATGTGATTTCCATCTAATAT
Position: -79
Score: 4.2
Sequence: TTTTGCGATATGGTTCATTTTA
Locus tag: Salmonelentericaenterica_010100005172
Salmonelentericaenterica_010100005172 -127 3.8 TGATGTAAATTGAATCAACTAT
-109 4.5 CTATGTGATTTCCATCTAATAT
-79 4.2 TTTTGCGATATGGTTCATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dsdC
Ortholog function: DNA-binding transcriptional dual regulator
Escherichia coli str. K-12 substr. MG1655 b2364 -115 3.9 TGGAGTGATTTACATCTAAAAA
-85 4.6 AATTGAGATATGGTTCACTTTA
Salmonella typhimurium LT2 STM3800 -142 3.8 TGATGTAAATTGAATCAACTAT
-124 4.5 CTATGTGATTTCCATCTAATAT
-94 4.2 TTTTGCGATATGGTTCATTTTA
Citrobacter koseri ATCC BAA-895 CKO_00019 -32 3.9 AAGGGTGATTTGCATCCAATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04079 -125 3.9 AAAGGTGATTTAGCTCTAAAAG
-95 4.2 AAATATGCTATGGGTCAAATTA
Serratia proteamaculans 568 Spro_2451 -76 3.6 TTTAGCGACATGGGTCAACTTT
Proteus mirabilis HI4320 PMI0184 -199 3.6 TATTGTTAAACATATTGAATAT
-117 4.4 ATAGGTGATCAGATGCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1968 -124 4.4 TTCAGTGATACCGATCAAAATT
-94 4.5 ATTTGCGATTTAAATCACTAAA
Position: -97
Score: 4.7
Sequence: AACAGTGATATAGATCACATAC
Locus tag: Salmonelentericaenterica_010100005197
Salmonelentericaenterica_010100005197 -97 4.7 AACAGTGATATAGATCACATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: maa
Ortholog function: maltose O-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b0459 -97 4.8 CTATGTGATCTTTATCACACAG
Salmonella typhimurium LT2 STM0472 -97 4.7 AACAGTGATATAGATCACATAG
Citrobacter koseri ATCC BAA-895 CKO_02692 -101 4.6 TCTCGTGATTTAGATCACATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00440 -100 4.7 CTTTGTGATAGACATCACATCA
Enterobacter sp. 638 Ent638_0939 -98 4.3 TGCTGTGACTCTGATCACATCA
Position: -302
Score: 4.3
Sequence: AGGTGTGACACGCCTCGCACTT
Position: -260
Score: 4
Sequence: TATCGTGATGCCCATCACTTCC
Locus tag: Salmonelentericaenterica_010100005232
Salmonelentericaenterica_010100005232 -302 4.3 AGGTGTGACACGCCTCGCACTT
-260 4 TATCGTGATGCCCATCACTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroH
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Escherichia coli str. K-12 substr. MG1655 b1704 -106 4.3 AGGTGTGACACACCTCGCACTT
-64 4 TATCGTGATGCGCATCACTTCC
Salmonella typhimurium LT2 STM1347 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Citrobacter koseri ATCC BAA-895 CKO_01728 -115 4.3 AGGTGTGAAACGCCTCGCATTT
-64 4.3 TATTGTGATGCCCATCACTTCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02162 -63 4 TATCGTGATGCGCATCACTTCC
Enterobacter sp. 638 Ent638_1743 -126 3.6 AGTTATGATCGCTTTCACTCTC
-62 3.6 TAAGGTGATGCCCATCACTTCC
Yersinia pestis KIM y1928 -64 4.3 TATTGTGATCGCCATCACTTCC
Serratia proteamaculans 568 Spro_2172 -135 3.9 TTTTGTGCTTTTTTTAGCGATT
-64 4.3 TATTGTGATCGCCATCACTTCC
Edwardsiella tarda EIB202 ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Proteus mirabilis HI4320 PMI1423 -55 3.9 TATTGTGATCTTAATCACTGGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2630 -62 3.8 TATTGTAATTTCCATTATCTAT
Position: -244
Score: 4.5
Sequence: AAGTTTGACGTTGTTCACAAAG
Locus tag: Salmonelentericaenterica_010100005287
Salmonelentericaenterica_010100005287 -244 4.5 AAGTTTGACGTTGTTCACAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompF
Ortholog function: Outer membrane protein F precursor
Salmonella typhimurium LT2 STM0999 -245 4.5 AAGTTTGACGTTGTTCACAAAG
Enterobacter sp. 638 Ent638_1448 -245 4.6 AAATTTGAGGTGGTTCACAAAG
Position: -142
Score: 4.2
Sequence: TTGTGTGACGCATGCCGCATTT
Locus tag: Salmonelentericaenterica_010100006102
Salmonelentericaenterica_010100006102 -142 4.2 TTGTGTGACGCATGCCGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Escherichia coli str. K-12 substr. MG1655 b0907 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0977 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02165 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00935 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1427 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2784 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2594 -78 3.5 AAGTATGACGGGTATAAAAATG
Proteus mirabilis HI4320 PMI0711 -119 3.5 TATTTTTGTGTGCTACACATAA
Position: -122
Score: 4.2
Sequence: ATTTGCGCGCTACGTCACATTT
Position: -85
Score: 3.8
Sequence: TGTTGTGATTACTTTTGAAAAT
Locus tag: Salmonelentericaenterica_010100006549
Salmonelentericaenterica_010100006549 -122 4.2 ATTTGCGCGCTACGTCACATTT
-85 3.8 TGTTGTGATTACTTTTGAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ulaA
Ortholog function: Ascorbate-specific PTS system, EIIC component
Escherichia coli str. K-12 substr. MG1655 b4193 -124 3.8 ATTTGCGGGTCGCGTCACATTT
-87 3.8 TGTTGTGATTACTTTTGAAAAT
Salmonella typhimurium LT2 STM4383.S -122 3.9 ATTTGCGCGCTACGTCACAGTT
-85 3.8 TGTTGTGATTACTTTTGAAAAT
Citrobacter koseri ATCC BAA-895 CKO_03643 -124 3.9 ATTTGCGTGGTGCGTCACAATT
-87 3.8 TGTTGTGATTACTTTTGAAAAT
Position: -99
Score: 4.4
Sequence: TACTTTGAGCCGGTTCACACTT
Locus tag: Salmonelentericaenterica_010100006734
Salmonelentericaenterica_010100006734 -99 4.4 TACTTTGAGCCGGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: deaD
Ortholog function: ATP-independent RNA helicase
Salmonella typhimurium LT2 STM3280.S -154 3.9 CTTTTTGATTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_04559 -103 3.9 CTTTTTGATTGCCATCACCTTC
-48 4.4 TACTTTGAGCCGGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03570 -154 3.8 TTTTTTGCTTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACAT
Enterobacter sp. 638 Ent638_3599 -154 4.1 TCTTATGATTGCCATCACCTTA
-99 4.4 TACTTTGAGCCGGTTCACACTT
Erwinia amylovora ATCC 49946 EAM_3065 -99 4.8 TAATTTGAGCCGGTTCACACTT
Yersinia pestis KIM y0696 -96 4.8 TAATTTGAGCCGGTTCACACTT
Serratia proteamaculans 568 Spro_0495 -96 4.8 TAATTTGAGCCGGTTCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0718 -96 4.4 CAATTTGAGCCGGTTCACACTT
Edwardsiella tarda EIB202 ETAE_0411 -96 4.8 TAATTTGAGCCGGTTCACACTT
Proteus mirabilis HI4320 PMI3424 -80 5 TAATTTGAGCCAGTTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4523 -95 5 TAATTTGAGCCAGTTCACATTT
Position: -2
Score: 4.6
Sequence: AAATGTGCTTCACCTCAAAAAA
Locus tag: Salmonelentericaenterica_010100007136
Salmonelentericaenterica_010100007136 -2 4.6 AAATGTGCTTCACCTCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruB
Ortholog function: PTS system, fructose-specific IIA/FPr component
Escherichia coli str. K-12 substr. MG1655 b2169 -178 4.3 AATTGTGCAGCACATCAAACTT
Salmonella typhimurium LT2 STM2206 -177 4.6 AAATGTGCTTCACCTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_00613 -50 4.1 AAGTGTGCTTTATCTCTAAATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02600 -177 3.5 AAGTGTGCAGTACCTCTAAGTT
Enterobacter sp. 638 Ent638_2763 -178 4.3 AAATGTGCTGCACTTCTAAATT
Erwinia amylovora ATCC 49946 EAM_2223 -179 4.4 AAATGTGCTGGCTGTCAAAAAT
Yersinia pestis KIM y2887 -178 4.1 AAATGTGCGGAATGTCAAAAAT
Serratia proteamaculans 568 Spro_3230 -177 4 AAGTGTGCGTGAGGTCAAAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2729 -180 4.1 AAATGTGCGTGATGTCAAAATT
Edwardsiella tarda EIB202 ETAE_2303 -199 4.1 AAATGTGCTGAAGGTCTAAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1992 -180 4.7 AAATGTGAGTAATCTCAAAAAA
Position: -222
Score: 3.6
Sequence: AAATGTGAGAGAGTGCAACCTG
Locus tag: Salmonelentericaenterica_010100007953
Salmonelentericaenterica_010100007953 -222 3.6 AAATGTGAGAGAGTGCAACCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: putP
Ortholog function: Proline/sodium symporter PutP (TC 2.A.21.2.1)
Escherichia coli str. K-12 substr. MG1655 b1015 -207 3.6 AAATGTGAGAGAGTGCAACCTG
Salmonella typhimurium LT2 STM1125 -204 3.6 AAATGTGAGAGAGTGCAACCTG
Citrobacter koseri ATCC BAA-895 CKO_02041 -80 3.6 AAATGTGAGAGAGTGCAACCTG
Enterobacter sp. 638 Ent638_1542 -249 3.7 TTTTATGCGGCACTTAACACTT
Serratia proteamaculans 568 Spro_2930 -211 3.9 AAATGTGACGCAGGGTAAACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4218 -130 3.7 TTGTGCAACCTTGTTAACAAAT
Proteus mirabilis HI4320 PMI1615 -220 3.8 TAGTGTGAAGTTACATACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1958 -243 4.4 AAATGTGATTCAGTAAACGTTT
Position: -128
Score: 3.8
Sequence: GGGTGTTATCTGCCTCACAGTT
Locus tag: Salmonelentericaenterica_010100008333
Salmonelentericaenterica_010100008333 -128 3.8 GGGTGTTATCTGCCTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araT
Ortholog function: putative permease of the Na+:galactoside symporter family
Salmonella typhimurium LT2 STM0149 -127 3.8 GGGTGTTATCTGCCTCACAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00115 -171 4.7 CATTGTTATCTGCTTCACACTT
Position: -113
Score: 4.4
Sequence: TTTAGTGAAGCAGATCGCACTA
Locus tag: Salmonelentericaenterica_010100008953
Salmonelentericaenterica_010100008953 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3)
Escherichia coli str. K-12 substr. MG1655 b3225 -115 4.6 TTTAGTGAAGCAGATCGCATTA
Salmonella typhimurium LT2 STM3339 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Citrobacter koseri ATCC BAA-895 CKO_04629 -116 4.2 TTTAGTGAAGTAGATCGCACTC
Enterobacter sp. 638 Ent638_3661 -112 4.6 TTTAGTGAAGCAGATCGCATTA
Edwardsiella tarda EIB202 ETAE_1381 -141 4.5 TTTAGTGAACTAGATCGCACAA
Position: -134
Score: 3.8
Sequence: AAGCACGATATTGCTCACACTA
Locus tag: Salmonelentericaenterica_010100009038
Salmonelentericaenterica_010100009038 -134 3.8 AAGCACGATATTGCTCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: caiF
Ortholog function: transcriptional activator for carnitine metabolism
Escherichia coli str. K-12 substr. MG1655 b0034 -134 3.8 AAGCAGGATTTAGCTCACACTT
Salmonella typhimurium LT2 STM0068 -134 3.8 AAGCACGATATTGCTCACACTA
Citrobacter koseri ATCC BAA-895 CKO_03349 -144 3.8 AAGCACGATTTCGCTCACACTA
Position: -122
Score: 4.3
Sequence: TATTGTTAATCACATCATAAAT
Locus tag: Salmonelentericaenterica_010100010210
Salmonelentericaenterica_010100010210 -122 4.3 TATTGTTAATCACATCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpaG
Ortholog function: 4-hydroxyphenylacetate catabolism
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04789 -125 4.4 TTGTGTTAATCCGATCACAAAA
Serratia proteamaculans 568 Spro_0625 -123 5 TTTTGTTATCACGATCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0990 -159 3.7 AATAATGATAAAAAACAAATTT
-129 4.9 TATTGTTACTGAGATCACAATT
Position: -6
Score: 4.2
Sequence: AAATGTGTGCGTGATCTCATTA
Locus tag: Salmonelentericaenterica_010100010365
Salmonelentericaenterica_010100010365 -6 4.2 AAATGTGTGCGTGATCTCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycdZ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1036 -52 4 AAATGTGTGCTCGATCTCATTC
-50 3.7 ATGTGTGCTCGATCTCATTCAT
Citrobacter koseri ATCC BAA-895 CKO_02033 -40 3.9 AAATGTGTGCGTGATCTCATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01059 -52 4.1 TACTGTGTTTTAGATCGCATTC
Serratia proteamaculans 568 Spro_3290 -125 4.2 TTTTGTGACAAATTCCACATCT
-96 3.6 TATCTTGTTTCTCATTACATAT
-73 4.6 TTATGTGAAATACATCACATGA
Edwardsiella tarda EIB202 ETAE_2360 -124 4.3 AAGTGTGATTGATGTCACTTTG
-72 3.6 CGGTGTGATGTCCATCAATGAA
Proteus mirabilis HI4320 PMI3124 -240 3.7 ATTAATAATATATATCAAACAA
Position: -105
Score: 4.4
Sequence: TGATGTGACGTTAATCACTCTA
Locus tag: Salmonelentericaenterica_010100010525
Salmonelentericaenterica_010100010525 -105 4.4 TGATGTGACGTTAATCACTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdrA
Ortholog function: membrane protein FdrA
Escherichia coli str. K-12 substr. MG1655 b0518 -213 3.8 TTATTTGATAATCCGCTCACTT
-105 4.7 CTGTGTGATATTCATCACCTTA
Salmonella typhimurium LT2 STM0529 -120 4.4 TGATGTGACGTTAATCACTCTA
Proteus mirabilis HI4320 PMI2202 -191 4.2 AACTGTGACTTTAATCACTCTA
Position: -171
Score: 4.7
Sequence: TTTTGTGATTATAATCACTAAA
Locus tag: Salmonelentericaenterica_010100010550
Salmonelentericaenterica_010100010550 -171 4.7 TTTTGTGATTATAATCACTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -212 4.3 AAATTTAATTCGTATCGCAAAT
-178 4.6 TTTTGTGAGTTTTGTCACCAAA
Salmonella typhimurium LT2 STM0684 -205 3.7 AAAATTAATTCGCCTCGCAAAT
-171 4.7 TTTTGTGATTATAATCACTAAA
Citrobacter koseri ATCC BAA-895 CKO_02486 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 5.2 TTTTGTGATTTGAATCACCAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -217 3.8 AAAATTAATTCGTATCGCAAAT
-183 5 TTTTGTGATAATTATCACCAAA
Enterobacter sp. 638 Ent638_1193 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 4.6 TTTTGTGAGTTTTGTCACCAAA
Erwinia amylovora ATCC 49946 EAM_1147 -195 4.9 ATATGTGATTAAAGTCACCTTA
Yersinia pestis KIM y1202 -214 5.1 TTTTGTGATAAATATCACCAAA
Serratia proteamaculans 568 Spro_1227 -194 5.3 TTTTGTGATTTACATCACCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -180 5 TTATGTGATAAAAATCACCAAA
Edwardsiella tarda EIB202 ETAE_2617 -190 5 ATTTGTGATAACTATCACCAAT
Proteus mirabilis HI4320 PMI0454 -217 4.9 ATTTGTGATTAAAGTCACCTAT
Position: -97
Score: 3.6
Sequence: TTCAGTGATATCCGTTAAAATT
Locus tag: Salmonelentericaenterica_010100011040
Salmonelentericaenterica_010100011040 -97 3.6 TTCAGTGATATCCGTTAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjtD
Ortholog function: RNA methyltransferase, TrmH family, group 1
Salmonella typhimurium LT2 STM4600 -97 3.6 TTCAGTGATATCAGTTAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03386 -222 3.7 AGGTGTGATTCATTCTAAATTA
-53 4.2 TATGTTGACATTGGTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04857 -94 4 TTTAGTGATTTTTGTTGCAAAT
Enterobacter sp. 638 Ent638_0563 -54 4.3 TATGTTGAGGTGGATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3892 -83 3.7 AATCGTGATCGATTACACGTCC
Position: -92
Score: 4.2
Sequence: AAGTGTGATTTTCGTCCCCATA
Locus tag: Salmonelentericaenterica_010100011240
Salmonelentericaenterica_010100011240 -92 4.2 AAGTGTGATTTTCGTCCCCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybeD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0631 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0636 -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02527 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00663 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1166 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1174 -146 4.2 TATTGTGATTAATCTTATATTG
Position: 8
Score: 3.3
Sequence: CGTCGTGAAAGAGATCAAAGTC
Locus tag: Salmonelentericaenterica_010100011865
Salmonelentericaenterica_010100011865 8 3.3 CGTCGTGAAAGAGATCAAAGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceF
Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b0115 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0153 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03258 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00119 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0661 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0748 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0768 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4010 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3788 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0660 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2045 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -1
Score: 3.4
Sequence: AATGGCTATCGAAATCAAAGTA
Locus tag: Salmonelentericaenterica_010100011875
Salmonelentericaenterica_010100011875 -1 3.4 AATGGCTATCGAAATCAAAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceF
Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b0115 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0153 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03258 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00119 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0661 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0748 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0768 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4010 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3788 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0660 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2045 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -78
Score: 4.8
Sequence: CAATGAGATTTAGATCACATAT
Locus tag: Salmonelentericaenterica_010100011950
Salmonelentericaenterica_010100011950 -78 4.8 CAATGAGATTTAGATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cdd
Ortholog function: cytidine deaminase
Escherichia coli str. K-12 substr. MG1655 b2143 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 5.1 TAATGAGATTCAGATCACATAT
Salmonella typhimurium LT2 STM2183 -128 4.2 ATTTGCGATACGTCGCGCATTT
-78 4.8 CAATGAGATTTAGATCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00646 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 4.8 CAATGAGATTTGGATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02584 -78 4.4 GAATGAGATATTCATCACATAT
Enterobacter sp. 638 Ent638_2746 -127 4.2 ATTTGCGATGCGTCGCGCAATT
-77 4.9 TAATGAGAACTGGATCACATAT
Erwinia amylovora ATCC 49946 EAM_2202 -124 3.9 ACTTGCGATAAGTCTCTCATTT
-104 4.1 TTTGGTGATGCATTTCATTTAT
-74 4.7 TAGAGCGATTTAGATCACATAT
Yersinia pestis KIM y2657 -75 5 TAATGAGATATAAATCACAATT
Serratia proteamaculans 568 Spro_1568 -127 4.1 ACTTGCGATACATCTCGCAATT
-77 4.5 TAAAGAGATTTACATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2830 -130 4.6 AATTGAGATACATCTCGCATTT
-79 4.5 TAAAGAGATTCCGATCACAATT
Edwardsiella tarda EIB202 ETAE_1162 -76 4.9 AAAAGTGATTATTATCACAAAT
Proteus mirabilis HI4320 PMI0643 -132 4.4 ATTTGAGATGTATCTCCCAATT
-82 5.1 AAATATGATTTTAATCACATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1547 -75 4.7 CTATATGATATTTATCACATTA
Position: -137
Score: 5
Sequence: TGATGTGACAAACATCACATTA
Locus tag: Salmonelentericaenterica_010100012752
Salmonelentericaenterica_010100012752 -137 5 TGATGTGACAAACATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfC
Ortholog function: Predicted purine nucleoside transporter, MFS superfamily
Salmonella typhimurium LT2 STM3473 -137 5 TGATGTGACAAACATCACATTA
-84 3.8 ATTATTTAAATGCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03750 -140 5.3 AAGCGTGATGCAGATCACATTA
-109 3.7 AAAGATAACCCATTTCACAATA
Enterobacter sp. 638 Ent638_3791 -206 4.8 AAAAGTGACTTAGATCACATTG
Serratia proteamaculans 568 Spro_2681 -82 4.3 AATTGTGAACCCGATCACTTCA
Position: -316
Score: 5.1
Sequence: TAATGTGATGTTTGTCACATCA
Locus tag: Salmonelentericaenterica_010100012757
Salmonelentericaenterica_010100012757 -316 5.1 TAATGTGATGTTTGTCACATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppiA
Ortholog function: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b3363 -204 4.2 TTTTGTGATCTGTTTAAATGTT
-151 4.2 AGAGGTGATTTTGATCACGGAA
Salmonella typhimurium LT2 STM3472 -214 4.3 TTTTGTGATGCATTTAAATAAT
-161 5.1 TAATGTGATGTTTGTCACATCA
Citrobacter koseri ATCC BAA-895 CKO_04785 -215 3.7 TTTAGTGATGTATTTAAATGTT
-162 5.2 TAACGTGACATTGATCACATTA
Position: -182
Score: 4.3
Sequence: GAACGTGATAGCGTTCACAGTT
Position: -147
Score: 4
Sequence: CGGTGTGATGTCGTCCGCATTT
Position: -62
Score: 3.8
Sequence: TAAGGTGAGGCCGATAACCCTT
Locus tag: Salmonelentericaenterica_010100013022
Salmonelentericaenterica_010100013022 -182 4.3 GAACGTGATAGCGTTCACAGTT
-147 4 CGGTGTGATGTCGTCCGCATTT
-62 3.8 TAAGGTGAGGCCGATAACCCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaS
Ortholog function: L-rhamnose operon regulatory protein RhaS
Escherichia coli str. K-12 substr. MG1655 b3905 -182 4.5 GAACGTGATGATGTTCACAATT
-147 4.5 TGATGTGATGCTCACCGCATTT
Salmonella typhimurium LT2 STM4048 -182 4.3 GAACGTGATAGCGTTCACAGTT
-147 4 CGGTGTGATGTCGTCCGCATTT
-62 3.8 TAAGGTGAGGCCGATAACCCTT
Citrobacter koseri ATCC BAA-895 CKO_03099 -194 4.5 GAACGTGATAGCGTTCACAATT
-34 4.3 ATTTCTGACATGTTTCTCATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04214 -204 3.8 GACCGTGAGGGACATCACAGTT
Enterobacter sp. 638 Ent638_4066 -194 4.2 GAACGTGAGGGAGTTCACAGTT
Yersinia pestis KIM y0590 -214 3.9 GAAAGTGAAACAGCTCACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0441 -144 3.9 CGGTGTGATCCTTGCCACACTT
Position: -141
Score: 3.8
Sequence: GAATGTGAACTAAATCACTTCA
Locus tag: Salmonelentericaenterica_010100013077
Salmonelentericaenterica_010100013077 -141 3.8 GAATGTGAACTAAATCACTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rnk
Ortholog function: Regulator of nucleoside diphosphate kinase
Escherichia coli str. K-12 substr. MG1655 b0610 -140 3.8 GAATGTGACGCAAATCACTTCA
Salmonella typhimurium LT2 STM0616 -141 3.8 GAATGTGAACTAAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_02549 -141 3.9 GAATGTGAGCTAAATCACTTCA
Enterobacter sp. 638 Ent638_1148 -187 4.1 AAATCTGAGAACGATCACGTTT
-140 3.8 GAATGTGACATTCATCACTTCA
Serratia proteamaculans 568 Spro_4382 -170 3.7 CTTCGTGATCGGGATCTCTTTC
-67 3.8 TTTTGTGCTGTTTTTCCGAATT
Edwardsiella tarda EIB202 ETAE_0492 -145 4.4 ATTTGTGAGCCAGCTCTCTTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4046 -127 3.7 GTTCGTGATCATGATCTCTTTA
Position: -242
Score: 4.9
Sequence: AATCTTGATTTAGATCACACAA
Locus tag: Salmonelentericaenterica_010100013277
Salmonelentericaenterica_010100013277 -242 4.9 AATCTTGATTTAGATCACACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -241 5 AAATTTGATTTGGATCACGTAA
Salmonella typhimurium LT2 STM1749 -242 4.9 AATCTTGATTTAGATCACACAA
Citrobacter koseri ATCC BAA-895 CKO_01318 -242 4.9 AAATTTGATCTGGATCACGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -237 4.7 ATACTTGATCTAAATCACGTAA
Enterobacter sp. 638 Ent638_2304 -253 4.1 TAAATTGATTCAGATCATGTTT
Erwinia amylovora ATCC 49946 EAM_1900 -223 3.9 ATTGATGATCTGCATCATCTTT
Yersinia pestis KIM y2023 -286 5.3 TTTTGTGATTTAAATCACGAAA
Serratia proteamaculans 568 Spro_2704 -278 5.1 TTTTATGATTTAAATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -315 4.5 AAGTTCGATGTTGATCACAAAA
Edwardsiella tarda EIB202 ETAE_1508 -265 5 TTTCGTGACCTTAATCACAAAA
Proteus mirabilis HI4320 PMI1486 -246 5.4 TATTGTGATGTAGATCACTTTA
-187 3.7 AAAGGAGATCTTTTTAAAATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -237 3.7 TATTTTTATTAGATTAAAAATT
-138 4.6 TTATGTGATTAAGATCAATATA
Position: -124
Score: 4.7
Sequence: TTTTGTGATGCGGCGCATAAAT
Locus tag: Salmonelentericaenterica_010100013317
Salmonelentericaenterica_010100013317 -124 4.7 TTTTGTGATGCGGCGCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiH
Ortholog function: putative transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b0796 -123 4.5 TTTTGTGACGCAGCGCATAAAT
Salmonella typhimurium LT2 STM0819 -124 4.7 TTTTGTGATGCGGCGCATAAAT
Citrobacter koseri ATCC BAA-895 CKO_02331 -124 4.5 TTTTGTGACATACCGCATAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00824 -224 3.6 AAATGAAACGGTATTCAAAAAA
-118 4.7 AATTGTTAAGCCCATCACAAAT
Enterobacter sp. 638 Ent638_1287 -126 4.4 TTTTGTGACACGGCGCATAAAA
Serratia proteamaculans 568 Spro_1330 -146 4.6 TTAAGTGACGCAGAGCACAATA
Proteus mirabilis HI4320 PMI0619 -160 3.6 AATTTTTAAATAAATCATGTTT
Position: -278
Score: 5.2
Sequence: ATGTGTGAAGTTGATCACATAT
Locus tag: Salmonelentericaenterica_010100013547
Salmonelentericaenterica_010100013547 -278 5.2 ATGTGTGAAGTTGATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: proP
Ortholog function: L-Proline/Glycine betaine transporter ProP
Salmonella typhimurium LT2 STM4290 -235 5.2 ATGTGTGAAGTTGATCACATAT
Serratia proteamaculans 568 Spro_1860 -132 5.1 TTACGTGATTCGCATCACACAA
Position: -158
Score: 4.7
Sequence: AAAGGTGATGGATATCACAAAC
Locus tag: Salmonelentericaenterica_010100013627
Salmonelentericaenterica_010100013627 -158 4.7 AAAGGTGATGGATATCACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaQ
Ortholog function: Transglycosylase associated protein
Escherichia coli str. K-12 substr. MG1655 b1795 -98 4.2 CTCCGTGATGCTCGTCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_01818 -97 4.9 AAAAGTGACATTTATCACAAAT
Enterobacter sp. 638 Ent638_1658 -245 3.7 CAATGTGAGCAATGTCGTACTA
-101 4.8 CACTGTGATACCTATCACAAAT
Position: -95
Score: 4.8
Sequence: AAATGTGCCTTGTGTCACATTT
Locus tag: Salmonelentericaenterica_010100013987
Salmonelentericaenterica_010100013987 -95 4.8 AAATGTGCCTTGTGTCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dacD2
Ortholog function: D-alanyl-D-alanine carboxypeptidase
Escherichia coli str. K-12 substr. MG1655 b2010 -99 4.3 AAATGAGAGGGTAGTCACATTT
Salmonella typhimurium LT2 STM2062 -95 4.8 AAATGTGCCTTGTGTCACATTT
Position: -279
Score: 3.6
Sequence: TCTTGTTACAAGTTTAACACTT
Locus tag: Salmonelentericaenterica_010100014287
Salmonelentericaenterica_010100014287 -279 3.6 TCTTGTTACAAGTTTAACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: csgD
Ortholog function: DNA-binding transcriptional activator in two-component regulatory system
Escherichia coli str. K-12 substr. MG1655 b1040 -201 3.9 TTTAGTTACATGTTTAACACTT
-134 3.3 TAGTTTTATATTTTACCCATTT
Salmonella typhimurium LT2 STM1142 -202 3.4 TTTGGTTACAAGTTTAACACTT
Citrobacter koseri ATCC BAA-895 CKO_02029 -207 4.1 TTTTGTTACAAGTTTAACACTT
Position: -55
Score: 5.3
Sequence: TTATGTGATCTAAATCACTTTT
Locus tag: Salmonelentericaenterica_010100014602
Salmonelentericaenterica_010100014602 -55 5.3 TTATGTGATCTAAATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aaeR
Ortholog function: LysR-family transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3243 -37 5.3 TTATGTGATCTAAATCACTTTT
Salmonella typhimurium LT2 STM3367 -37 5.3 TTATGTGATCTAAATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_04651 -37 5.3 ATATGTGATCTAAATCACTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03652 -55 5.1 ATGTGTGATCTAAATCACTTTT
Enterobacter sp. 638 Ent638_3680 -37 5.3 ATATGTGATCTAAATCACTTTT
Erwinia amylovora ATCC 49946 EAM_3128 -37 5.3 AAATGTGATCTAAATCACTTTT
Yersinia pestis KIM y0180 -55 5.1 ATGTGTGATCTAAATCACTTTT
Serratia proteamaculans 568 Spro_4393 -37 4.9 ATCTGTGATCTAAATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0276 -37 5.1 TAGTGTGATCTAAATCACTTTT
Edwardsiella tarda EIB202 ETAE_3129 -131 4.5 ATCTGTGACGCAAATCACTTTT
Position: -166
Score: 5.4
Sequence: AAAAGTGATTTAGATCACATAA
Locus tag: Salmonelentericaenterica_010100014607
Salmonelentericaenterica_010100014607 -166 5.4 AAAAGTGATTTAGATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcR
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3242 -167 5.4 AAAAGTGATTTAGATCACATAA
Salmonella typhimurium LT2 STM3366 -166 5.4 AAAAGTGATTTAGATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_04650 -168 5.4 AAAAGTGATTTAGATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03651 -116 5.2 AAAAGTGATTTAGATCACACAT
-63 3.7 TATTGTTAGCTACATAATAAAC
Enterobacter sp. 638 Ent638_3679 -165 5.4 AAAAGTGATTTAGATCACATAT
Yersinia pestis KIM y0179 -269 5.2 AAAAGTGATTTAGATCACACAT
Serratia proteamaculans 568 Spro_4392 -293 5.1 AAAAGTGATTTAGATCACAGAT
-89 3.8 ATTTGTGGTGCGTGTCAGCTAA
Position: -99
Score: 3.9
Sequence: ATGAGTGACATGTGCCACACTT
Locus tag: Salmonelentericaenterica_010100015537
Salmonelentericaenterica_010100015537 -99 3.9 ATGAGTGACATGTGCCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybaY
Ortholog function: Glycoprotein-polysaccharide metabolism
Escherichia coli str. K-12 substr. MG1655 b0453 -101 4.3 ATGCGTGATGTGTGCCACACTT
Salmonella typhimurium LT2 STM0465 -100 3.9 ATGAGTGACATGTGCCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02705 -102 4 ATAAGTGAGATATGCCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00416 -99 3.8 ATCTGAGATCTGTGCCACACTT
Enterobacter sp. 638 Ent638_0921 -96 4.3 ATAAGTGATATGTGCCACACTT
Position: -137
Score: 3.5
Sequence: AAGTGTGGCACATGTCACTCAT
Locus tag: Salmonelentericaenterica_010100015542
Salmonelentericaenterica_010100015542 -137 3.5 AAGTGTGGCACATGTCACTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tesB
Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-)
Escherichia coli str. K-12 substr. MG1655 b0452 -138 3.9 AAGTGTGGCACACATCACGCAT
Citrobacter koseri ATCC BAA-895 CKO_02706 -135 3.9 AAGTGTGGCATATCTCACTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00415 -139 3.8 AAGTGTGGCACAGATCTCAGAT
Enterobacter sp. 638 Ent638_0920 -131 4 AAGTGTGGCACATATCACTTAT
Yersinia pestis KIM y1043 -153 3.6 TAGCGTGCTAATTATAGCATAA
Serratia proteamaculans 568 Spro_1111 -54 3.6 TGCCGTGATATTCCGCACACTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1162 -154 3.7 TAGTATGATTCAATAAACACAA
Position: -241
Score: 4
Sequence: GAATGCGATTACAGTCACATTA
Position: -107
Score: 3.9
Sequence: AATCGTGATTTTGTCCAGATAC
Locus tag: Salmonelentericaenterica_010100016072
Salmonelentericaenterica_010100016072 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pck
Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b3403 -240 4.2 GAATGCGATTCCACTCACAATA
-137 4 TTTCGTGACAGGAATCACGGAG
Salmonella typhimurium LT2 STM3500 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Citrobacter koseri ATCC BAA-895 CKO_04825 -107 3.9 AATCGTGATTTTGTCCAGATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03773 -242 3.7 GAAAGCGATTACATTCACATTT
-138 3.7 CTTCGTGACAGGAGTCACCGTT
Enterobacter sp. 638 Ent638_3816 -241 4.1 GTATGCGATTACATTCACATTA
Yersinia pestis KIM y3918 -130 4.2 ATTCGTGTTCCATCTCTCATAA
-80 3.8 ATATTTGATAGCTATCGCTGTT
Serratia proteamaculans 568 Spro_4617 -80 4.1 ATATTTGATACCTATCGCGGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4106 -81 4 TTTTATGATTGCTATCGCGGTT
Edwardsiella tarda EIB202 ETAE_3277 -82 3.9 TTTTTTGATGACTATCTCGGTT
Proteus mirabilis HI4320 PMI3015 -131 4 ATTTGTGCATTAGTTCTCGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0100 -86 3.8 TTTTTTGATAACTATCGCTGTT
Position: -88
Score: 4.7
Sequence: ACGTGTGATGTAGATCACATCT
Locus tag: Salmonelentericaenterica_010100017041
Salmonelentericaenterica_010100017041 -88 4.7 ACGTGTGATGTAGATCACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycfR
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1112 -114 3.7 ATTAATGATTGTTATAAAAAAT
-87 4.8 GTATGTGATCCAGATCACATCT
Salmonella typhimurium LT2 STM1214 -88 4.7 ACGTGTGATGTAGATCACATCT
Citrobacter koseri ATCC BAA-895 CKO_01942 -113 3.8 TATAATGATCGTTATAAAAAAA
-86 4.5 ACGTGTGACCTGGATCACATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01110 -95 4.9 ACGTGTGACATAGATCACATTA
Enterobacter sp. 638 Ent638_1627 -91 4.7 ACGTGTGATGCAGATCACATCT
Serratia proteamaculans 568 Spro_4435 -116 3.7 TTATTTGATAAAGATTATCAAA
Position: -178
Score: 4.2
Sequence: TCATGTGACCCATATCTCCTTA
Position: -117
Score: 4.2
Sequence: TATTGTGATTTTGCGCATTAAA
Locus tag: Salmonelentericaenterica_010100017166
Salmonelentericaenterica_010100017166 -178 4.2 TCATGTGACCCATATCTCCTTA
-117 4.2 TATTGTGATTTTGCGCATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glgS
Ortholog function: glycogen synthesis protein GlgS
Escherichia coli str. K-12 substr. MG1655 b3049 -225 3.4 AATAGTTTCCTTGCTTACATTT
-203 3.4 ATCTGTGTTAATAATAACACAG
-124 3.8 AAGTGTGATCGGGGACAATATA
Salmonella typhimurium LT2 STM3197 -222 3.3 TCGCGTGATAATTTTCATGCTT
-178 4.2 TCATGTGACCCATATCTCCTTA
-117 4.2 TATTGTGATTTTGCGCATTAAA
Citrobacter koseri ATCC BAA-895 CKO_04437 -118 3.4 AAGTGTGATGTCAGGCAACTGA
Position: -253
Score: 4.7
Sequence: TTATGTGATCTGTGTTGCATAA
Locus tag: Salmonelentericaenterica_010100017736
Salmonelentericaenterica_010100017736 -253 4.7 TTATGTGATCTGTGTTGCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malK
Ortholog function: maltose/maltodextrin transporter ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b4035 -254 4.4 TTGTGTGATCTCTGTTACAGAA
-225 3.9 TAATGTGGAGATGCGCACATAA
-191 3.7 TTTTGCAAGCAACATCACGAAA
Salmonella typhimurium LT2 STM4230 -254 4.7 TTATGTGATCTGTGTTGCATAA
-225 3.6 TAATGCGTGCTGGCGCACACAA
-223 3.8 ATGCGTGCTGGCGCACACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03880 -254 4.7 TTATGTGATCTGTGTTGCATAA
-225 3.7 TAATGCGTGTTGGCGCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04424 -254 4.5 TTGTGTGATCTCCATTGCAAAA
-225 3.7 TATTGCGTCCTGGAGCACAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0457 -250 4 GGGTGTGATCTCTATTACAAAA
-221 3.8 AAGCGTGCCGTTGCCCACAAAA
-187 4.9 TTTTGCGATAAATATCACAATT
Position: -282
Score: 4
Sequence: TTATGTGACTTACTGCAATATT
Position: -191
Score: 3.9
Sequence: AAATAGGATTTTCCTCACGAAT
Locus tag: Salmonelentericaenterica_010100018611
Salmonelentericaenterica_010100018611 -282 4 TTATGTGACTTACTGCAATATT
-191 3.9 AAATAGGATTTTCCTCACGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yffB
Ortholog function: FIG138056: a glutathione-dependent thiol reductase
Escherichia coli str. K-12 substr. MG1655 b2471 -246 3.8 GTATGTGATACACAGCAACATT
Salmonella typhimurium LT2 STM2482 -282 4 TTATGTGACTTACTGCAATATT
Citrobacter koseri ATCC BAA-895 CKO_00317 -276 4 TTATGTGACTTACTGCAATATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02804 -218 4 TAATGTGACGTAGAGCAACCTC
-179 4 TAATGTTAAAGCCCTCACATCA
Enterobacter sp. 638 Ent638_2966 -254 4 TTATGTGACCAATAGCAATATT
-77 3.6 ATATGTTATGTTTTGCCAAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1292 -138 3.7 TTCTGCAACGCAGTTCACAGTA
Position: -263
Score: 4.6
Sequence: CATTGTGATTAGCCTCACATCT
Locus tag: Salmonelentericaenterica_010100019426
Salmonelentericaenterica_010100019426 -263 4.6 CATTGTGATTAGCCTCACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: sugar transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -156 3.6 TATGATGATATAACTCAATTAT
-82 4.9 TGATGTGATTTGCTTCACATCT
Salmonella typhimurium LT2 STM3091 -83 4.6 CATTGTGATTAGCCTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_04318 -83 5.3 TAACGTGATTCGAATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -84 3.8 AGCCGTGATTATAGTCACGTTT
Enterobacter sp. 638 Ent638_3347 -171 3.9 TATTGGGATGCACATCAACTCT
-102 3.7 TAGTGTAACCGATTACACCAAT
-84 5.3 CAATGTGATTTATCTCACATAT
Erwinia amylovora ATCC 49946 EAM_2827 -152 4.1 TCATGTGATCTGTCGCACAGTC
Serratia proteamaculans 568 Spro_1160 -276 4.5 TGGTGTGATATCGGTTACATTT
-100 3.6 TTGTGTAATCGTTTCCACTAAT
-82 4.6 TAATGTGATCGCACTCACTTAC
Edwardsiella tarda EIB202 ETAE_2966 -275 3.7 CAAAGTGAAAACGATTACATTT
-61 4.5 TTATGTGATCATGCGCACTTTA
Position: -153
Score: 3.9
Sequence: TGCGGTGATCTGGATCACGTTC
Locus tag: Salmonelentericaenterica_010100020306
Salmonelentericaenterica_010100020306 -153 3.9 TGCGGTGATCTGGATCACGTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: garD
Ortholog function: D-galactarate dehydratase
Escherichia coli str. K-12 substr. MG1655 b3128 -210 4.2 TATTTTGAGCATATGCACATAA
-127 4.4 ATGATTGACATTGATCACATTT
-52 3.7 AAATGAGACCAGGTCCTCATTT
Salmonella typhimurium LT2 STM3250 -153 4.3 TGCGGTGATCTGGATCACATTC
Citrobacter koseri ATCC BAA-895 CKO_04527 -54 4 AGTTGTTCTCTTTAACACATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03540 -125 4.8 AGGAGTGATGCCGATCACATTT
Enterobacter sp. 638 Ent638_3570 -143 4.7 AGGGGTGATCTTGATCACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3578 -296 4.2 TAGTGCGAGGTATTTCACGAAA
-204 5.1 AAATGTGATCAAACTCACCAAA
Position: -38
Score: 3.3
Sequence: ATTTGTGAGCATTTTTGAACTC
Locus tag: Salmonelentericaenterica_010100020881
Salmonelentericaenterica_010100020881 -38 3.3 ATTTGTGAGCATTTTTGAACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galS
Ortholog function: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b2151 -146 3.5 GATAACGATCTGGATCACATTC
-95 3.9 TGCTGTGACTCGATTCACGAAG
Salmonella typhimurium LT2 STM2191 -154 3.5 GATAACGATCTGGATCACATTC
-103 3.5 CCCTGTGATGTTTCTCACGCAG
-38 3.3 ATTTGTGAGCATTTTTGAACTC
Citrobacter koseri ATCC BAA-895 CKO_00640 -157 3.5 GATAACGATCTGGATCACATTC
-106 3.4 CCCTGTGACCTTACTCACGTAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02589 -160 3.3 GATAACGATCTCGATCACAATC
-109 3.4 CCGTGTGACCTCACTCACGCAG
-33 3.6 TGACGTGCTGTAATTCTCTTAA
Enterobacter sp. 638 Ent638_2751 -160 3.4 GATAACGATCTGGATCACAATC
-109 4.1 CTGTGTGAGCTTCTTCACGTAG
Erwinia amylovora ATCC 49946 EAM_2208 -110 3.4 GGCTGTGAGGTTTCTCACGTAG
Serratia proteamaculans 568 Spro_1562 -135 3.4 AATTGAGATCTGGCGCAGGTAG
-84 3.5 TCCTGTGACGGGATTCACGCAG
Position: -154
Score: 4.1
Sequence: AAACTTGATGCACATCAATTTT
Locus tag: Salmonelentericaenterica_010100021383
Salmonelentericaenterica_010100021383 -154 4.1 AAACTTGATGCACATCAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Escherichia coli str. K-12 substr. MG1655 b1109 -154 3.9 AAACTTGATTAACATCAATTTT
Salmonella typhimurium LT2 STM1211 -154 4.1 AAACTTGATGCACATCAATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01106 -152 4.1 AAACTTGATGCACATCAATTTT
Enterobacter sp. 638 Ent638_1624 -153 4 AAACTTGATTCATATCAATTTT
Erwinia amylovora ATCC 49946 EAM_1473 -55 3.7 TAAGGTTATTTTATTAACCTTT
Yersinia pestis KIM y1777 -152 3.8 AAAGTTGATATATATCAATTTT
Serratia proteamaculans 568 Spro_1926 -153 4.3 AAGTTTGATGTACATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1815 -153 4 TAAATTGATATATATCAATTTT
Edwardsiella tarda EIB202 ETAE_2070 -166 4.3 TTATTTGATTTGAATCAATTTT
Proteus mirabilis HI4320 PMI0875 -157 4.6 TTTTTTGATATAAATCAACTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2821 -154 3.8 GAATTTGATGTTGTTCAATTTT
Position: -149
Score: 5.7
Sequence: TTTTGTGATATAGTTCACAAAA
Locus tag: Salmonelentericaenterica_010100021698
Salmonelentericaenterica_010100021698 -149 5.7 TTTTGTGATATAGTTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcB
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b4060 -149 5.7 AATTGTGATATAGTTCACAAAA
Salmonella typhimurium LT2 STM4263 -149 5.7 TTTTGTGATATAGTTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03830 -150 5.7 TATTGTGATATAGTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04460 -143 5.4 AAGTGTGATATAGTTCACACAA
Enterobacter sp. 638 Ent638_0263 -82 5.3 AAACGTGATATAGTTCACACAT
Serratia proteamaculans 568 Spro_2355 -81 5 CAATGTGACGCAGATCACACTA
Position: -290
Score: 3.5
Sequence: TTGTGCGACATACCGCACGGTT
Position: -238
Score: 3.6
Sequence: TTATGTAACGTAATAAAAATTA
Locus tag: Salmonelentericaenterica_010100021708
Salmonelentericaenterica_010100021708 -290 3.5 TTGTGCGACATACCGCACGGTT
-238 3.6 TTATGTAACGTAATAAAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: igaA
Ortholog function: IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system
Escherichia coli str. K-12 substr. MG1655 b3398 -288 3.6 TTGTGCGATATCGGACACGCTT
-123 3.8 TACTGTGATGTGCTTAATGATG
Salmonella typhimurium LT2 STM3495 -238 3.6 TTATGTAACGTAATAAAAATTA
Citrobacter koseri ATCC BAA-895 CKO_04821 -290 3.9 TTGTGCGATATACAGCACGGTT
-238 3.7 TTATGTAACGTAGTAAAAATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03769 -282 3.8 TTGTGCGATACGCAACACGCTT
Enterobacter sp. 638 Ent638_3811 -287 3.7 TTGTGCGATATGACGCACGGTT
Yersinia pestis KIM y3922 -186 3.7 TATTGTGACTGCGTTAGCTTTG
Position: -54
Score: 3.5
Sequence: AACCGTGCGGTATGTCGCACAA
Locus tag: Salmonelentericaenterica_010100021713
Salmonelentericaenterica_010100021713 -54 3.5 AACCGTGCGGTATGTCGCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nudE
Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-)
Escherichia coli str. K-12 substr. MG1655 b3397 -53 3.7 AAGCGTGTCCGATATCGCACAA
Citrobacter koseri ATCC BAA-895 CKO_04820 -54 4.1 AACCGTGCTGTATATCGCACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03768 -54 4 AAGCGTGTTGCGTATCGCACAA
Enterobacter sp. 638 Ent638_3810 -55 3.6 AACCGTGCGTCATATCGCACAA
Yersinia pestis KIM y3923 -247 4.5 CAATGTGATCAAGTTCTAATAT
Serratia proteamaculans 568 Spro_4612 -135 4.4 CAATGTGATCAAGATCGGATTT
Edwardsiella tarda EIB202 ETAE_3268 -116 3.6 AAATATGAGCATCTGCGCACAA
Position: -25
Score: 3.7
Sequence: ATACGTGAAAGGAACAACAAAA
Locus tag: Salmonelentericaenterica_010100021923
Salmonelentericaenterica_010100021923 -25 3.7 ATACGTGAAAGGAACAACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: maeB
Ortholog function: malic enzyme
Escherichia coli str. K-12 substr. MG1655 b2463 -257 3.9 ATGAGTGCGTTAATTCACACTT
Salmonella typhimurium LT2 STM2472 -240 3.8 ATGAGTGTGTTGATTCACACTT
Enterobacter sp. 638 Ent638_2958 -231 4.1 ATACATGACGTACTTAACAAAA
Yersinia pestis KIM y1449 -92 3.7 GATTGTGATAAATCACTCACTA
Serratia proteamaculans 568 Spro_3472 -209 3.6 CTTTGTTATCAAACTCACTATC
-90 4.1 GTTTGTGACGTTTCTCTCACTA
Photorhabdus luminescens subsp. laumondii TTO1 plu2719 -74 4 TGTTATGATTTGACACACAGTA
Position: -200
Score: 3.6
Sequence: AAGGTTGAGTTAGATCGCAGAA
Locus tag: Salmonelentericaenterica_010100021933
Salmonelentericaenterica_010100021933 -200 3.6 AAGGTTGAGTTAGATCGCAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yejG
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b2181 -158 3.7 AAACGTGACCACGCCCGCAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02614 -204 3.8 AAAGTTGTTTTGGATCACAGAA
Erwinia amylovora ATCC 49946 EAM_2233 -177 3.6 AAATGAGCATTACTTCTCAAAA
Yersinia pestis KIM y2914 -238 4.4 AAATGGGATCTGAATCCCAAAT
Serratia proteamaculans 568 Spro_3250 -214 4.2 AAATGCGAGCTGAGTCGCAAAA
-121 4.1 GCTTGTGATGTTTTTTACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2740 -178 4 ATTCGTGATCAGTTTGGCATTA
-101 3.8 TGTTGTTTTTTTGTTCACGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2865 -185 4.1 AAATGAGAGATTGATCTCACTT
-183 3.6 ATGAGAGATTGATCTCACTTTT
-141 3.8 TAATGTAATACTATAAACACAA
Position: -145
Score: 3.8
Sequence: TTTATTGATATTTATAATAAAT
Position: -56
Score: 4.9
Sequence: AATCGTGATACAGCGCACAAAT
Locus tag: Salmonelentericaenterica_010100022063
Salmonelentericaenterica_010100022063 -145 3.8 TTTATTGATATTTATAATAAAT
-56 4.9 AATCGTGATACAGCGCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yicG
Ortholog function: Putative inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3646 -58 4.4 AATCGTGACAATGCGCACAAAT
Salmonella typhimurium LT2 STM3738 -210 3.7 TTAAATTATCTAAGTCAAAATA
-147 3.8 TTTATTGATATTTATAATAAAT
-58 4.9 AATCGTGATACAGCGCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_05103 -58 4.7 AATCGTGATATTACGCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03994 -55 4.9 AATCGTGATCCTGCGCACAAAT
Enterobacter sp. 638 Ent638_0094 -55 3.9 AATCGTGATATGTTCTGCAAAA
Edwardsiella tarda EIB202 ETAE_0032 -180 3.8 AAAACTAATCTATATCAAATAT
Position: -128
Score: 4
Sequence: TGCGGTGAGTTGTTTCACAAAA
Locus tag: Salmonelentericaenterica_010100022073
Salmonelentericaenterica_010100022073 -128 4 TGCGGTGAGTTGTTTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbI
Ortholog function: Hypothetical transcriptional regulator ygbI
Escherichia coli str. K-12 substr. MG1655 b2735 -166 3.7 TTGTTTGATATTGTGAATATAA
-127 5.2 TATGGTGATCTGATTCACATAA
Salmonella typhimurium LT2 STM2919 -128 4 TGCGGTGAGTTGTTTCACAAAA
-87 3.6 TTTTGTGAAGGCAATCCTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01606 -271 3.6 TAATGTGATTTAATGATAGAAT
-230 4.7 ATATGTGAGAGTTATCACGAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_pKPN4p07051 -233 3.6 TAATGTGATTTAATGATAGAAT
-192 4.7 TTATGTGAGAGTTATCACGAAT
Erwinia amylovora ATCC 49946 EAM_1104 -238 4.5 ATTAGTGATAAACTTCACATCA
Serratia proteamaculans 568 Spro_1493 -211 3.9 ATCAGCGATCGTTGTCACAATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4325 -267 4.8 TGTGGTGATTTTTATCACATAA
Edwardsiella tarda EIB202 ETAE_1921 -132 3.9 AACCGTGTTTATCCTCACAAAT
Position: -185
Score: 4
Sequence: TTTTGTGAAACAACTCACCGCA
Locus tag: Salmonelentericaenterica_010100022078
Salmonelentericaenterica_010100022078 -185 4 TTTTGTGAAACAACTCACCGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbJ
Ortholog function: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Escherichia coli str. K-12 substr. MG1655 b2736 -90 4.9 TTATGTGAATCAGATCACCATA
Salmonella typhimurium LT2 STM2918 -90 4 TTTTGTGAAACAACTCACCGCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01605 -91 5 ATTCGTGATAACTCTCACATAT
Erwinia amylovora ATCC 49946 EAM_1106 -90 4.4 TGATGTGAAGTTTATCACTAAT
Serratia proteamaculans 568 Spro_1492 -92 4.1 AATTGTGACAACGATCGCTGAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4327 -92 4.5 TTATGTGATAAAAATCACCACA
Edwardsiella tarda EIB202 ETAE_1922 -93 3.9 ATTTGTGAGGATAAACACGGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2507 -147 3.8 ATAAATAATATAAATCAAATAA
-90 3.7 GAATGTGATAACCATCGTGTAT
Position: -80
Score: 4.2
Sequence: AACTGTGATGTATATCGAAGTG
Locus tag: Salmonelentericaenterica_010100023543
Salmonelentericaenterica_010100023543 -80 4.2 AACTGTGATGTATATCGAAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoC
Ortholog function: 2-deoxyribose-5-phosphate aldolase
Escherichia coli str. K-12 substr. MG1655 b4381 -149 4.6 TTATTTGAACCAGATCGCATTA
-96 4.5 AATTGTGATGTGTATCGAAGTG
Salmonella typhimurium LT2 STM4567 -133 4.9 TAATTTGATTCAGATCTCATTA
-80 4.2 AACTGTGATGTATATCGAAGTG
Citrobacter koseri ATCC BAA-895 CKO_03410 -134 4.2 TTATTTGAAGTGGATCTCGTTA
-81 4.2 AACTGTGATGTATATCGAAGTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04837 -158 5.2 ATTTGTGATTTTAATCACGTTA
-105 3.7 AACTGTGATGAATGTCGAAGTG
Enterobacter sp. 638 Ent638_0541 -151 4.6 AAATTTGAAGTGGATCTCATTA
-98 3.7 AACTGTGATGAATGTCGAAGTG
Erwinia amylovora ATCC 49946 EAM_0615 -233 4.6 TGATGTGATAATTCTAACATTA
Yersinia pestis KIM y3743 -169 3.7 TGCGGTGAGATGGATCTCAATT
Serratia proteamaculans 568 Spro_0660 -262 4.6 ATTTGTGAACGATATCGCGTTA
-240 5.5 TTTTGTGATGGTCTTCACATAT
-188 3.8 TAGTGTGACTGTGAACGCGAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0727 -282 4.4 AAGTGTGAATGAATGCACAAAA
Proteus mirabilis HI4320 PMI2416 -267 4.4 ATATGTGAGTTACTTCGCAACT
-135 5.6 TTTTGTGATTCTGATCACAATT
-83 4.5 TATTGTGACAGAAAGCACATCT
Position: -82
Score: 5.6
Sequence: TAATGTGATTTACATCACACAT
Locus tag: Salmonelentericaenterica_010100023918
Salmonelentericaenterica_010100023918 -82 5.6 TAATGTGATTTACATCACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: raiA
Ortholog function: stationary phase translation inhibitor and ribosome stability factor
Escherichia coli str. K-12 substr. MG1655 b2597 -81 4.8 TTATGAGATTTTCATCACACAT
Citrobacter koseri ATCC BAA-895 CKO_03918 -40 5.2 TAATGTGATTTAAATCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02919 -88 5.6 AAATGTGATTTATATCACACAT
Enterobacter sp. 638 Ent638_3076 -81 5.4 ATGTGTGATTTAGATCACACAT
Erwinia amylovora ATCC 49946 EAM_2617 -83 5.2 AAATGTGATTTCAATCACGATT
Serratia proteamaculans 568 Spro_0882 -83 4.8 ATACGTGATTTTCATCACGCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3349 -86 4 AAAAGCGATCAATCTCACGCTT
Edwardsiella tarda EIB202 ETAE_2834 -82 3.8 ATCCGTGATTTTCCTCTCACAC
Proteus mirabilis HI4320 PMI0391 -82 4.6 AAAAGTGATCTTGATCATGTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1266 -87 5.1 AATAGTGATTTAGATCACCTTT
Position: -61
Score: 3.7
Sequence: TTCTGTGACTGGCGTTACAATC
Locus tag: Salmonelentericaenterica_010100024118
Salmonelentericaenterica_010100024118 -61 3.7 TTCTGTGACTGGCGTTACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Salmonella typhimurium LT2 STM4221 -61 3.7 TTCTGTGACTGGCGTTACAATC
Citrobacter koseri ATCC BAA-895 CKO_03893 -61 4.1 TTTTGTGACTGGCGTTACAATC
Serratia proteamaculans 568 Spro_4477 -80 3.7 AAAAGAGATCATAATCACAGTC
Proteus mirabilis HI4320 PMI2754 -245 3.7 CAGTGAGATGTTAAACACAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4379 -205 3.8 TGACGCGATGAGAATCATAAAA
Position: -201
Score: 4
Sequence: TGTTTTTACTTCACTCACATAA
Locus tag: Salmonelentericaenterica_010100024638
Salmonelentericaenterica_010100024638 -201 4 TGTTTTTACTTCACTCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rcsA
Ortholog function: Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB
Escherichia coli str. K-12 substr. MG1655 b1951 -201 4 TGTTTTAAGCTCACTCACATAT
Salmonella typhimurium LT2 STM1982 -201 4 TGTTTTTACTTCACTCACATAA
Citrobacter koseri ATCC BAA-895 CKO_00992 -200 4.1 TGTTTTTACCTTACTCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02421 -195 3.7 TGTTTTTAATTCGGTCACACTA
Enterobacter sp. 638 Ent638_2542 -206 4.3 TGTTTTTATGCCCTTCACAATA
Position: -101
Score: 4
Sequence: TTATGTGCGCTACCTCACGCAC
Locus tag: Salmonelentericaenterica_010100024828
Salmonelentericaenterica_010100024828 -101 4 TTATGTGCGCTACCTCACGCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: folE
Ortholog function: GTP cyclohydrolase I
Escherichia coli str. K-12 substr. MG1655 b2153 -101 3.8 TTATGTGCGCCGCCTCACGCAC
Salmonella typhimurium LT2 STM2193 -101 4 TTATGTGCGCTACCTCACGCAC
Citrobacter koseri ATCC BAA-895 CKO_00638 -98 3.8 TTATGTGCGCCGCCTCACGCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02591 -84 3.5 TTCTGTGCGCCACCTCACGCAC
Enterobacter sp. 638 Ent638_2753 -84 3.9 TTATGTGCGCCACCTCACGCAC
Serratia proteamaculans 568 Spro_1560 -121 4.3 AATCTTGACCGGGTTCACGTTA
Proteus mirabilis HI4320 PMI0639 -86 4.9 TAATGTGATTCAGCTCATCTAA
Position: -154
Score: 3.5
Sequence: GTTTGTGAGGTTATTAGCGAAA
Position: -126
Score: 3.3
Sequence: ATTCGTGATCCGTTTGTTGTTT
Locus tag: Salmonelentericaenterica_010100025023
Salmonelentericaenterica_010100025023 -154 3.5 GTTTGTGAGGTTATTAGCGAAA
-126 3.3 ATTCGTGATCCGTTTGTTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Escherichia coli str. K-12 substr. MG1655 b0116 -224 3.3 AATTGTTAACAATTTTGTAAAA
Salmonella typhimurium LT2 STM0154 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
Citrobacter koseri ATCC BAA-895 CKO_03256 -95 3.3 AATTGTTAACAATTTTGTAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00120 -105 3.3 AATTGTTAACAATTTTGTAAAA
Yersinia pestis KIM y0769 -253 3.3 ATTGGTGATCTTGTTATTACTG
Serratia proteamaculans 568 Spro_4009 -246 3.6 TATGGTGATGTAATGAAAAAAG
Proteus mirabilis HI4320 PMI2044 -133 3.4 GGTTGTGAGATCTGTCATGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu3621 -131 3.9 TGTTGCGAGTTCTGTCACGTTA
Position: -82
Score: 4
Sequence: AAATGTGATCTGTGTTAGATCA
Locus tag: Salmonelentericaenterica_010100025293
Salmonelentericaenterica_010100025293 -82 4 AAATGTGATCTGTGTTAGATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W
Escherichia coli str. K-12 substr. MG1655 b1256 -166 4.9 AAAATTGATTTAAATCACATTA
-82 3.8 TAATGTGATCTATGTAGGATCA
Salmonella typhimurium LT2 STM1732 -82 4.2 AAATGTGATCTGTATTAGATCA
Citrobacter koseri ATCC BAA-895 CKO_01333 -82 3.9 TAATGTGATCTGTATTGGATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01248 -101 3.9 CATTGCGATCGGTAGCAAAAAT
-45 4 TAGTGTGATCTAAAACAGATCA
Enterobacter sp. 638 Ent638_2283 -121 3.7 AAAATTAATCTGGATCAACAAA
Yersinia pestis KIM y2044 -69 3.9 AGATGTGATCTCGATTAGATCA
Serratia proteamaculans 568 Spro_2674 -135 3.8 TTTTTTGATTCAGATCAATCCT
Edwardsiella tarda EIB202 ETAE_1528 -161 3.9 CTGATTGATGTCTATCAAATTT
Proteus mirabilis HI4320 PMI1350 -168 4.6 AAATTTGATGTGGATCAATTAT
-85 3.8 AGTTGTGATCGGCATTAGATCA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -164 4.3 AACTTTGATTTGGATCAAGTTA
-39 3.8 TATTTTGATTGACTTTAAATCA
Position: -106
Score: 3.5
Sequence: GTTTGTGATCGTATTTGTAATT
Position: -75
Score: 3.6
Sequence: AAAATTGACAGCCGTCACTTTT
Position: 26
Score: 3.7
Sequence: TACCGTGATGGATCGCATCTAT
Locus tag: Salmonelentericaenterica_010100027003
Salmonelentericaenterica_010100027003 -106 3.5 GTTTGTGATCGTATTTGTAATT
-75 3.6 AAAATTGACAGCCGTCACTTTT
26 3.7 TACCGTGATGGATCGCATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yihV
Ortholog function: Fructokinase (EC 2.7.1.4); Sugar kinase YihV
Salmonella typhimurium LT2 STM4024.S -69 3.6 AAAATTGACAGCCGTCACTTTT
Position: -68
Score: 4.6
Sequence: TGATGTGATCGGTAGCACGTTT
Locus tag: Salmonelentericaenterica_010100027433
Salmonelentericaenterica_010100027433 -68 4.6 TGATGTGATCGGTAGCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yohJ
Ortholog function: LrgA family protein
Escherichia coli str. K-12 substr. MG1655 b2141 -68 4.9 TAATGTGATCGGTAGCACGTTT
Salmonella typhimurium LT2 STM2181 -68 4.6 TGATGTGATCGGTAGCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00648 -68 4.6 TGATGTGATCGGTAGCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02582 -68 5 TGATGTGATCGGTAGCACATTT
Enterobacter sp. 638 Ent638_2744 -68 4.7 TGATGTGATCCGTAGCACGTTT
Yersinia pestis KIM y2654 -32 4.7 TAGTGTGATGGGTAGCACAGAA
Serratia proteamaculans 568 Spro_1570 -62 4.3 ATTTGTGGCGGAGGTCACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2828 -69 4.5 ATTCGTGATCTGTGGCACGTAA
Edwardsiella tarda EIB202 ETAE_1164 -68 4.9 TGATGTGATCAGTAGCACATTT
Proteus mirabilis HI4320 PMI0645 -71 5.2 TATTGTGATCCATAGCACACTT
Position: -53
Score: 3.5
Sequence: GGCTGTGATCCATTTATCAAAA
Position: -2
Score: 3.5
Sequence: AAATGTTATTTAGTATACAGCT
Locus tag: Salmonelentericaenterica_010100027988
Salmonelentericaenterica_010100027988 -53 3.5 GGCTGTGATCCATTTATCAAAA
-2 3.5 AAATGTTATTTAGTATACAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuB
Ortholog function: C4-dicarboxylate transporter DcuB
Escherichia coli str. K-12 substr. MG1655 b4123 -53 3.5 GACTGTGATCTATTCAGCAAAA
Salmonella typhimurium LT2 STM4301 -53 3.5 GGCTGTGATCCATTTATCAAAA
Citrobacter koseri ATCC BAA-895 CKO_03748 -52 3.9 GACTGTGATCTATTTATCAAAA
Enterobacter sp. 638 Ent638_2479 -81 3.3 AAATCTGATCTGGCTCCCAGCC
Serratia proteamaculans 568 Spro_3863 -77 3.6 GTTTGTGATCGCTATCCCTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1533 -296 3.5 TATTGCGAGCGAGATCTTTTAT
-247 3.5 TTAATAGATTTAGATCAAGAAA
Edwardsiella tarda EIB202 ETAE_2844 -194 3.6 ATACTTTATTCAGATCAATTTT
Proteus mirabilis HI4320 PMI0389 -138 3.3 AACTATAACAACGATCAAAAAA
Position: -180
Score: 3.8
Sequence: ATGTTTGATTTCGCGCGCCTTT
Position: -131
Score: 5.2
Sequence: ATATGTGCTGTAATTCACATTA
Locus tag: Salmonelentericaenterica_010100030015
Salmonelentericaenterica_010100030015 -180 3.8 ATGTTTGATTTCGCGCGCCTTT
-131 5.2 ATATGTGCTGTAATTCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -219 3.7 TTGTTTGATTTCGCGCATATTC
-179 3.6 AAACGTGATTTCATGCGTCATT
-129 4.6 ATGTGTGCGGCAATTCACATTT
Salmonella typhimurium LT2 STM2283 -220 3.6 ATGTTTGATTTCGCGCATAATC
-180 4.2 AAACGTGATTTCGTGCGCCTTT
-131 5.2 ATATGTGCTGTAATTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_00537 -221 3.6 TTGTTTGATTTCGCGCATAATC
-181 4 AAACGTGATTTCGTGCGCTTTT
-132 4.8 ATCTGTGCTGTAATTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -218 3.8 TTGTTTGATTTCGAGCATATTC
-178 4.6 TTATGTGATTTCGTGCTCACAT
-128 4.5 AATTGTGCGATGTTTCACAGTA
Enterobacter sp. 638 Ent638_2804 -201 3.6 TTGTTTGATTTCGAACATAATC
-161 3.8 AAGCGTGATCTCATGCGCTTAT
-111 4 ATCTGTGCGTTGATTCACAGTA
Erwinia amylovora ATCC 49946 EAM_0195 -240 3.7 AAACGCGATGCGGTTAACGATG
-147 3.7 ATTTGTGCCTCTCTTCACGGTC
Serratia proteamaculans 568 Spro_0199 -249 4.5 GAATGTGATCATAATCACGATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -253 3.7 ATGTTTGATAAAGAGCAAAAAC
-193 4.9 AAGTGTGATTTGCATCACTAAA
Edwardsiella tarda EIB202 ETAE_3116 -200 3.7 ATATGAGCGATCTCTCACAGTA
Proteus mirabilis HI4320 PMI3591 -291 3.6 ATGTTTGATAATGAGCAAAAAC
-232 5.4 ATATGTGATACTAATCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -250 4.9 TATTGTGACAATTGTCACAATT
Position: -54
Score: 3.4
Sequence: TAATGGGACAGGTTCCAGATAA
Locus tag: Salmonelentericaenterica_010100032280
Salmonelentericaenterica_010100032280 -54 3.4 TAATGGGACAGGTTCCAGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -330
Score: 3.6
Sequence: ATTTATGATACGTGGCTAAAAA
Locus tag: Salmonelentericaenterica_010100032675
Salmonelentericaenterica_010100032675 -330 3.6 ATTTATGATACGTGGCTAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfbV
Ortholog function: putative cytoplasmic protein
Escherichia coli str. K-12 substr. MG1655 b2295 -263 3.6 ATTTATGATTAACATCATGCAC
-54 4.1 AGTTGTGAATTTGCACAAATTT
Erwinia amylovora ATCC 49946 EAM_2300 -44 4 TTGTGTGTTTTTTTTAAAATTT
Edwardsiella tarda EIB202 ETAE_2396 -34 3.6 TTTTTTAACTCTTATCGAATAA
Proteus mirabilis HI4320 PMI1770 -290 3.7 ATTAATGATACGCATCATGCTT
-260 3.6 AAACTTGATGCTAATTATAGTT
Position: 9
Score: 3.8
Sequence: ATTTTTGAGAAGTATCAATTAA
Locus tag: Salmonelentericaenterica_010100032800
Salmonelentericaenterica_010100032800 9 3.8 ATTTTTGAGAAGTATCAATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_03585
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM4446 -229 4.5 AACTGTAATACCCATCACACTT
-162 3.8 TGCCGCGATAGATCTCACACTT
-111 4.1 TTCTGTGGCGCAGATCACCTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04639 -172 4.3 TGTTGTGATACATCTCACGCCA
-121 4.2 ATATGTGGAGTCGATCACCTAA
Enterobacter sp. 638 Ent638_0430 -265 3.8 AAACCTTATCCGCGTCACACTT
-189 4.6 TAGCGTGATATTCATCACGCAA
Erwinia amylovora ATCC 49946 EAM_0475 -156 3.8 TGATGTGAGTTGTCTCGCTTTG
Position: -95
Score: 3.7
Sequence: ATTCGTGATTGCTGTCGTAAAG
Locus tag: Salmonelentericaenterica_010100033539
Salmonelentericaenterica_010100033539 -95 3.7 ATTCGTGATTGCTGTCGTAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: aldB
Ortholog function: Aldehyde dehydrogenase B (EC 1.2.1.22)
Escherichia coli str. K-12 substr. MG1655 b3588 -94 3.7 ATTCGTGATAGCTGTCGTAAAG
Salmonella typhimurium LT2 STM3680 -95 3.7 ATTCGTGATTGCTGTCGTAAAG
Citrobacter koseri ATCC BAA-895 CKO_05043 -94 3.6 TATCGTGACCGCAGTCGTAAAG
Enterobacter sp. 638 Ent638_0143 -93 3.4 ATCCGTGATTCCTGTCGTAAAG
Position: -189
Score: 4.3
Sequence: ATGTCTGACGGAGTTCACACTT
Locus tag: Salmonelentericaenterica_010100033924
Salmonelentericaenterica_010100033924 -189 4.3 ATGTCTGACGGAGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompA
Ortholog function: outer membrane protein A
Escherichia coli str. K-12 substr. MG1655 b0957 -188 4 ATGCCTGACGGAGTTCACACTT
Salmonella typhimurium LT2 STM1070 -188 4.3 ATGTCTGACGGAGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02111 -164 4 ATGCCTGACGGAGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00986 -185 3.9 ATGCCTGACAGAGTTCACACTT
Enterobacter sp. 638 Ent638_1469 -189 4 ATGCCTGACGGAGTTCACACTT
Serratia proteamaculans 568 Spro_1754 -195 3.8 TTTTTAGAGCTTTATCACATCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1751 -200 3.9 TCTTATGACACAAATCACATCA
Edwardsiella tarda EIB202 ETAE_1267 -196 3.7 TTTGGTGAGCATAATCACATCG
Position: -302
Score: 3.4
Sequence: TAATTTGTTTTTATTCATTATT
Position: -157
Score: 4
Sequence: AAACGTGATTTCTGTAAAATTG
Position: -120
Score: 3.2
Sequence: TTTACTGATTTCAATCAAAACC
Locus tag: Salmonelentericaenterica_010100034169
Salmonelentericaenterica_010100034169 -302 3.4 TAATTTGTTTTTATTCATTATT
-157 4 AAACGTGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex
Escherichia coli str. K-12 substr. MG1655 b0113 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0151 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03260 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00117 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0659 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0746 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0766 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4012 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3790 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0658 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2047 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -153
Score: 4.1
Sequence: TTTTGTGAAATAGGTCACCGCT
Position: -92
Score: 3.7
Sequence: AATTTTGCTACGCACCACCATA
Locus tag: Salmonelentericaenterica_010100034579
Salmonelentericaenterica_010100034579 -153 4.1 TTTTGTGAAATAGGTCACCGCT
-92 3.7 AATTTTGCTACGCACCACCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fxsA
Ortholog function: suppressor of F plamsid exlusion of phage T7
Escherichia coli str. K-12 substr. MG1655 b4140 -202 4.1 TACCGTAATCTGGATCACTTTA
-152 4.3 ATTTGTGAAATAGATCACCGCT
Salmonella typhimurium LT2 STM4327 -203 4.1 TACCGTAATCTGGATCACTTAA
-153 4.1 TTTTGTGAAATAGGTCACCGCT
Citrobacter koseri ATCC BAA-895 CKO_03695 -156 4.1 TTTTGTGAAATAGGTCACCGCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04530 -140 3.7 ATCTGTGAAATGGGTCACCGCT
Enterobacter sp. 638 Ent638_0327 -151 3.8 ATCTGTGAAATGAATCACCGCT
Erwinia amylovora ATCC 49946 EAM_0417 -161 3.9 ATATCTGTTCCAGGTCACATTG
Yersinia pestis KIM y0607 -245 4.8 ATCTGTGATTGCTCTCACACTT
Serratia proteamaculans 568 Spro_0407 -117 4.9 TTCTGTGATCTCATTCACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0623 -245 3.7 AACTGTGATTGTAGTCACGAGT
-185 3.6 AAATGTGCAAAGGCGCACCCAT
Edwardsiella tarda EIB202 ETAE_0312 -189 4.6 ATCTGTGATAATACTCACAGAT
Proteus mirabilis HI4320 PMI2545 -188 4.7 TTTTGTGATCTATCTCATGGAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4136 -188 5.6 ATATGTGATATTTATCACAATT
Position: -54
Score: 4.2
Sequence: AGCGGTGACCTATTTCACAAAA
Position: -4
Score: 4.2
Sequence: TTAAGTGATCCAGATTACGGTA
Locus tag: Salmonelentericaenterica_010100034584
Salmonelentericaenterica_010100034584 -54 4.2 AGCGGTGACCTATTTCACAAAA
-4 4.2 TTAAGTGATCCAGATTACGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aspA
Ortholog function: aspartate ammonia-lyase
Escherichia coli str. K-12 substr. MG1655 b4139 -206 4.5 AGCGGTGATCTATTTCACAAAT
-156 4.2 TAAAGTGATCCAGATTACGGTA
Salmonella typhimurium LT2 STM4326 -209 4.2 AGCGGTGACCTATTTCACAAAA
-159 4.2 TTAAGTGATCCAGATTACGGTA
Citrobacter koseri ATCC BAA-895 CKO_03696 -54 4.2 AGCGGTGACCTATTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04529 -204 3.9 AGCGGTGACCCATTTCACAGAT
-154 3.8 ATAAGTGATCAAGCTTACTGAT
Enterobacter sp. 638 Ent638_0326 -205 4.1 AGCGGTGATTCATTTCACAGAT
Erwinia amylovora ATCC 49946 EAM_0416 -228 4.2 CAATGTGACCTGGAACAGATAT
Yersinia pestis KIM y0606 -224 4.6 AAGTGTGAGAGCAATCACAGAT
Serratia proteamaculans 568 Spro_0406 -205 4.7 AAACGTGAATGAGATCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0621 -272 4 ACTCGTGACTACAATCACAGTT
Edwardsiella tarda EIB202 ETAE_0311 -197 4.4 ATCTGTGAGTATTATCACAGAT
Proteus mirabilis HI4320 PMI2546 -206 4.1 ATCCATGAGATAGATCACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4137 -274 3.8 AGATATAATTGGGGTCACAGTT
-211 5.6 AATTGTGATAAATATCACATAT
Position: -147
Score: 4.3
Sequence: TTTTATGACGCAGTACACACAT
Locus tag: Salmonelentericaenterica_010100034604
Salmonelentericaenterica_010100034604 -147 4.3 TTTTATGACGCAGTACACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: facilitator for glycerol uptake
Salmonella typhimurium LT2 STM4087 -147 3.9 TTTATTGACGCAGTACACACAT
Position: -105
Score: 4.4
Sequence: ATTTGTGATCGCACCCGCACTT
Locus tag: Salmonelentericaenterica_010100034884
Salmonelentericaenterica_010100034884 -105 4.4 ATTTGTGATCGCACCCGCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ychH
Ortholog function: membrane protein
Escherichia coli str. K-12 substr. MG1655 b1205 -105 4.5 AATTGTGATCACGCCCGCACAT
Salmonella typhimurium LT2 STM1782 -105 4.4 ATTTGTGATCGCACCCGCACTT
Citrobacter koseri ATCC BAA-895 CKO_01260 -104 4.1 AATTGTGATCGCCCACGCACTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02241 -100 4.1 TAATGTGATCGTGGACGCACTC
Enterobacter sp. 638 Ent638_2343 -119 3.7 TGTTGTGACGAGAGTCATTAAT
-101 4 TAATGTGATCATTCACGCAACT
Erwinia amylovora ATCC 49946 EAM_1581 -97 3.9 AAATGTGATCGCTGACTCATCA
Yersinia pestis KIM y2296 -145 3.9 AGTTGTGATCGCTACCGCAACA
Serratia proteamaculans 568 Spro_1985 -117 4.2 ATTTGTGATCGCCTACGCAATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2185 -275 3.6 TAGCGTGATTATGAGAACGCTA
-117 3.8 ATCTGTGATCCCTCCCGCAATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2065 -189 4.1 AGTTGTGATCGTGTCCGCAATG
Position: -238
Score: 4.8
Sequence: AAATGTAATACCCATCACACTT
Position: -171
Score: 3.8
Sequence: TGCCGCGATAGATCTCACACTT
Position: -120
Score: 4.1
Sequence: TTCTGTGGCGCAGATCACCTAT
Locus tag: Salmonelentericaenterica_010100035144
Salmonelentericaenterica_010100035144 -238 4.8 AAATGTAATACCCATCACACTT
-171 3.8 TGCCGCGATAGATCTCACACTT
-120 4.1 TTCTGTGGCGCAGATCACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_03591
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM4440 -229 4.5 AACTGTAATACCCATCACACTT
-162 3.8 TGCCGCGATAGATCTCACACTT
-111 4.1 TTCTGTGGCGCAGATCACCTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04633 -172 4.3 TGTTGTGATACATCTCACGCCA
-121 4.2 ATATGTGGAGTCGATCACCTAA
Enterobacter sp. 638 Ent638_0424 -265 3.8 AAACCTTATCCGCGTCACACTT
-189 4.6 TAGCGTGATATTCATCACGCAA
Erwinia amylovora ATCC 49946 EAM_0469 -156 3.8 TGATGTGAGTTGTCTCGCTTTG
Position: -271
Score: 4
Sequence: TTTTATGATCTCATTAGCATAG
Position: -131
Score: 4.9
Sequence: AAGTGTAATATCCATCACATAT
Locus tag: Salmonelentericaenterica_010100036288
Salmonelentericaenterica_010100036288 -271 4 TTTTATGATCTCATTAGCATAG
-131 4.9 AAGTGTAATATCCATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: sugar transporter
Escherichia coli str. K-12 substr. MG1655 b2841 -131 4.4 AATTGGAATATCCATCACATAA
Salmonella typhimurium LT2 STM3016 -271 4 TTTTATGATCTCATTAGCATAG
-131 4.9 AAGTGTAATATCCATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03264 -191 4.4 AAGTTTAATGTCCATCACAAAA
Enterobacter sp. 638 Ent638_3294 -209 3.7 CGAGATGACATCGATCACATTT
-130 4.1 AATTGGAATATCCATCACAGAA
Position: -115
Score: 3.9
Sequence: TTCTGTGATGAAGATCTATATT
Locus tag: Salmonelentericaenterica_010100036708
Salmonelentericaenterica_010100036708 -115 3.9 TTCTGTGATGAAGATCTATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glk
Ortholog function: glucokinase
Escherichia coli str. K-12 substr. MG1655 b2388 -116 4.1 TTGTGTGACCCAGATCGATATT
Salmonella typhimurium LT2 STM2403 -116 3.9 TTCTGTGATGAAGATCTATATT
Citrobacter koseri ATCC BAA-895 CKO_00412 -116 4.5 TTATGTGATGCAGATCGATATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02738 -117 4.4 AAATGTGACCTGTGTCGCTAAA
Enterobacter sp. 638 Ent638_2921 -116 3.8 TTCTGTGACGAAGATCGATTAT
Yersinia pestis KIM y1505 -113 4.7 TTATGAGATGTCAGTCACAAAA
Serratia proteamaculans 568 Spro_3407 -116 4.8 TTTTGTGATCCGGATCGCTAAT
Position: -116
Score: 4.4
Sequence: AAACGTGATTTCGTACACATCT
Locus tag: Salmonelentericaenterica_010100037480
Salmonelentericaenterica_010100037480 -116 4.4 AAACGTGATTTCGTACACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiS
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0819 -116 4.7 AAATGTGATTTCGTACACATCT
Salmonella typhimurium LT2 STM0837 -116 4.4 AAACGTGATTTCGTACACATCT
Citrobacter koseri ATCC BAA-895 CKO_02299 -202 3.8 ATATGTGACAAACCGCTTATTA
-116 4.7 AAATGTGATTTCGTACACATCT
Enterobacter sp. 638 Ent638_1310 -119 4.7 AAATGTGATTTCGTACACATCT
Position: 19
Score: 3.3
Sequence: TATTCTGCAGGACATCGCCAAA
Locus tag: Salmonelentericaenterica_010100037685
Salmonelentericaenterica_010100037685 19 3.3 TATTCTGCAGGACATCGCCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pulE
Ortholog function: conserved protein with nucleoside triphosphate hydrolase domain
Escherichia coli str. K-12 substr. MG1655 b0107 -145 3.2 CTTCGTAACGCCTCGCAAATTT
Citrobacter koseri ATCC BAA-895 CKO_03269 -146 3.4 TTTTTCGAGCGGCCTCGCAAAC
Yersinia pestis KIM y0760 -123 3.8 TTACGTTATTGCAATAACCTAA
Proteus mirabilis HI4320 PMI2050 -146 4.3 TAATGCGAACTTGCTCTCAATA
Photorhabdus luminescens subsp. laumondii TTO1 plu3639 -227 4.1 AAATGTGAATCGACAAACAATT
-182 3.2 ATATTTGAATTTTAATTCATTA
Position: -161
Score: 3.6
Sequence: AACTCTCATCCAGATCACGTTT
Position: -92
Score: 4
Sequence: TTTTGTGGCGTTAATCACGGTT
Locus tag: Salmonelentericaenterica_010100038010
Salmonelentericaenterica_010100038010 -161 3.6 AACTCTCATCCAGATCACGTTT
-92 4 TTTTGTGGCGTTAATCACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lsrR
Ortholog function: LsrR, transcriptional repressor of lsr operon
Escherichia coli str. K-12 substr. MG1655 b1512 -87 4.1 AACTGTGGTTGCCATCACAGAT
Salmonella typhimurium LT2 STM4073 -161 3.6 AACTCTCATCCAGATCACGTTT
-92 4 TTTTGTGGCGTTAATCACGGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03508 -75 3.7 TTTTGCCAGTCGGCTCACACTT
Enterobacter sp. 638 Ent638_3537 -122 3.4 TTTATTGATTAGGATCCAATTC
Photorhabdus luminescens subsp. laumondii TTO1 plu3142 -137 4.3 AATTGTGATCTTGGCAATATTT
Position: -78
Score: 3.7
Sequence: TAATTTATTACATGTCACACTT
Locus tag: Salmonelentericaenterica_010100038640
Salmonelentericaenterica_010100038640 -78 3.7 TAATTTATTACATGTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galE2
Ortholog function: UDP-galactose-4-epimerase
Escherichia coli str. K-12 substr. MG1655 b0759 -78 3.8 TAATTTATTCCATGTCACACTT
Salmonella typhimurium LT2 STM0776 -78 3.7 TAATTTATTACATGTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02376 -36 3.7 TAATATATTCCATGTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00773 -78 3.7 TAACTTGTGCTATGTCACACTT
-44 4.1 ATATGCTATCTTCCTCACAAAC
Yersinia pestis KIM y3043 -163 3.7 TTATTTGTCTATGCTCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1389 -72 3.7 ATTCTCGCTGTAGATCACCTTT
Edwardsiella tarda EIB202 ETAE_2564 -195 3.7 TAGTGTAAGCGATACCACAAAC
Position: -323
Score: 4.6
Sequence: TCATGTGAAGAGGATCACAAAA
Position: -279
Score: 5.1
Sequence: AAGTGTGAAATATCTCACATAA
Position: -206
Score: 5.2
Sequence: CTTTGTGATCAATATCACATAA
Position: -163
Score: 5.4
Sequence: TTATGTGACGCAAATCACATAA
Locus tag: Salmonelentericaenterica_010100039410
Salmonelentericaenterica_010100039410 -323 4.6 TCATGTGAAGAGGATCACAAAA
-279 5.1 AAGTGTGAAATATCTCACATAA
-206 5.2 CTTTGTGATCAATATCACATAA
-163 5.4 TTATGTGACGCAAATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b3599 -206 4.5 TTTTGTGATGAACGTCACGTCA
-162 5.4 TTATGTGATTGATATCACACAA
-113 3.3 TTCAGTGCCAGATTTCGCAGTA
Salmonella typhimurium LT2 STM3685 -207 4.8 CTTTGTGATCAATATCACATCA
-163 5.4 TTATGTGACGCAAATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_05054 -203 5.2 TTTTGTGATCAATATCACATCA
-159 5 TCATGTGATCCAAATCACACAA
-110 3.4 TTCAGTGCCAGATTTCGCACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03942 -208 4.9 TTTTGTGATCATCATCACTAAA
-164 5.2 TCATGTGATCCAAATCACATAA
-115 3.4 TTCAGTGCCAGATTTCGCACTA
Enterobacter sp. 638 Ent638_0136 -224 3.4 TATTTTTTTCATACTCTCATTT
-205 4.8 TTTTGTGATGGCGATCACCTCA
-161 5.1 TTGCGTGATGCAGATCACACAA
Erwinia amylovora ATCC 49946 EAM_3416 -229 3.3 CATTGCGAATATCTTTACACTT
-210 3.9 CTTCGTGACTCATGTCACTAAA
-166 4.8 TTAAGTGACCCGCATCACACTT
-95 3.2 CGTTTTGATCGTGATCCCTCAA
-34 3.5 ACATGAGATTTGCATCATTAAT
Yersinia pestis KIM y4087 -223 4.6 AGATGTGATCTTAATCAACAAA
-179 4.5 TTGTGTGACTTTCGTCACGAAA
Serratia proteamaculans 568 Spro_0072 -195 5.2 AAATGTGATGTATATCACTATA
-151 4.5 GTTGGTGATCTGCATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0087 -230 5.1 TTTTGTGAAGTAAATCACCTAT
-186 4.5 TTGTGTGATTTTTGTCACGTTG
Position: -116
Score: 4.4
Sequence: TAATGTTATACATATCACTCTA
Locus tag: Salmonelentericaenterica_010100039575
Salmonelentericaenterica_010100039575 -116 4.4 TAATGTTATACATATCACTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -116 4.4 TAATGTTATACATATCACTCTA
Salmonella typhimurium LT2 STM3526 -116 4.4 TAATGTTATACATATCACTCTA
Citrobacter koseri ATCC BAA-895 CKO_04845 -116 4.5 TAATGTTATATGTATCACTCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -119 3.7 ATATGTTACACCCATCACTTCA
-58 3.7 TATAGTGAGCGATATCGAGCAT
Enterobacter sp. 638 Ent638_3835 -116 4.4 TTATGTTATCTCTATCACTCAA
-55 4 TATTATGAGCGATATCGAACAT
Erwinia amylovora ATCC 49946 EAM_3265 -124 4 AGACGTTATCGGCATCACGCAT
Yersinia pestis KIM y3891 -129 4.4 AAATGTTACCTCCATCACGCAT
Serratia proteamaculans 568 Spro_4642 -129 3.6 AACTGTTACCTCTATCACGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -144 4.3 TAATGTGACAACTATCATCATA
-124 4.4 TATTGTTAGCTTCATCACGCAT
Edwardsiella tarda EIB202 ETAE_3312 -124 4.3 TTGTGTTATCCGCATCGCGTAA
Proteus mirabilis HI4320 PMI2930 -129 4.4 AATTGTTATTTATATCACGCAG
Position: -293
Score: 3.9
Sequence: TTATGTGATCTCACGCAGCGTT
Position: -149
Score: 3.9
Sequence: AAACGTGAAGTTAATCACTTCA
Locus tag: Salmonelentericaenterica_010100042594
Salmonelentericaenterica_010100042594 -293 3.9 TTATGTGATCTCACGCAGCGTT
-149 3.9 AAACGTGAAGTTAATCACTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaT
Ortholog function: L-rhamnose-proton symport
Escherichia coli str. K-12 substr. MG1655 b3907 -145 4.1 AGATGTGAAGCAAATCACCCAC
Salmonella typhimurium LT2 STM4050 -293 3.6 TTATGTGACCTCACGCAGCGTT
-149 3.9 AAACGTGAAGTTAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_03094 -148 4.1 ATATGTGAGCCAAATCACCCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04216 -149 4.7 TTTTGTGATGTAGAACAACTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0450 -193 3.6 TTTTGTGATCCTGCCTATATCA
Position: -65
Score: 3.9
Sequence: TAATGTATTTTTATTCATAATT
Locus tag: Salmonelentericaenterica_010100044865
Salmonelentericaenterica_010100044865 -65 3.9 TAATGTATTTTTATTCATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -66 3.7 TAGTGTATTTTTATTCATAAAT
Salmonella typhimurium LT2 STM4120 -66 3.9 TAATGTATTTTTATTCATAATT
Citrobacter koseri ATCC BAA-895 CKO_03037 -27 4.3 TAATGTATTTTTATTCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -27 4 TATTGTATTTTTATTCAAAATA
Enterobacter sp. 638 Ent638_4029 -66 4.2 TAGTGTATTTTTATTCACATTT
Erwinia amylovora ATCC 49946 EAM_0137 -66 3.8 TATTGTATTTTTATTCACTATT
Yersinia pestis KIM y0309 -223 3.6 TATTTTTATTTATGTCAATAAA
Serratia proteamaculans 568 Spro_4782 -71 4.3 TATTGTATTTTTATTCACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -65 4 TATTGTATTTTTATTCAAAATA
Edwardsiella tarda EIB202 ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
Proteus mirabilis HI4320 PMI3236 -65 3.9 TAATGTATTTTTATTCAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -65 3.9 TAATGTATTTTTATTCAAAAAA
Position: -145
Score: 4
Sequence: TTGTGCGAGTCAGCTCAAACTT
Locus tag: Salmonelentericaenterica_010100044970
Salmonelentericaenterica_010100044970 -145 4 TTGTGCGAGTCAGCTCAAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dctA
Ortholog function: C4-dicarboxylate transport protein
Escherichia coli str. K-12 substr. MG1655 b3528 -143 4.1 TTGTGCGAGCCAGCTCAAACTT
Salmonella typhimurium LT2 STM3614 -145 4.1 TTGTGCGAGCCAGCTCAAACTT
Citrobacter koseri ATCC BAA-895 CKO_04970 -145 4 TTGTGCGAGCCAGCTCAAAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03878 -143 3.9 TTGTGCGAGTCAGCTCAAAGAT
Erwinia amylovora ATCC 49946 EAM_3380 -134 4.4 TGAAGTGATTCAGCTCATAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4362 -157 3.8 TGACGTGATTCAGCTCTTGTTT
Edwardsiella tarda EIB202 ETAE_3379 -155 3.6 TTATGCGTTTCAGCTCATAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3205 -176 4.9 TTATGTGATCTATATCTTAAAA
Position: -250
Score: 4.2
Sequence: GAATGTGATCAATTTAAAAATT
Locus tag: Salmonelentericaenterica_010100046215
Salmonelentericaenterica_010100046215 -250 4.2 GAATGTGATCAATTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b0002 -83 3.8 TTTATTGACTTAGGTCACTAAA
Salmonella typhimurium LT2 STM0002 -103 4.2 GAATGTGATCAATTTAAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03385 -249 4.1 GAATGTGATCAAATTAAAAATT
Enterobacter sp. 638 Ent638_0564 -252 4.4 AATTGTGATCAAATTAGAAATT
Proteus mirabilis HI4320 PMI0001 -232 3.9 AAATTTGACATCTCTCTCGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0563 -223 4.2 ATGTTTGACTTTGCGCACAAAT
Position: -78
Score: 4.4
Sequence: AGATATGATCTATATCAAATTC
Locus tag: Salmonelentericaenterica_010100046875
Salmonelentericaenterica_010100046875 -78 4.4 AGATATGATCTATATCAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: focA
Ortholog function: formate transporter
Escherichia coli str. K-12 substr. MG1655 b0904 -156 3.6 TATTTTTATTTGGATAATCAAA
-78 3.8 AGATATGATCTATATCAATTTC
Salmonella typhimurium LT2 STM0974 -78 4.4 AGATATGATCTATATCAAATTC
Citrobacter koseri ATCC BAA-895 CKO_02167 -198 3.6 TATTTTTATTTGGATAATCAAA
-120 4.4 AGATATGATCTATATCAAATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00932 -121 3.8 AGATATGATCTATATCAATTTC
Enterobacter sp. 638 Ent638_1424 -78 3.8 AGATATGATCTATATCAATTTC
Yersinia pestis KIM y2789 -84 4 CAATATGATCCATATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2596 -79 4.5 CAATATGATCCACATCAAATTT
Proteus mirabilis HI4320 PMI0706 -188 4 TTTTTTGATAAAATTTAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1614 -88 4.7 AATTATGATCTATATCAAATTC
Position: -159
Score: 3.1
Sequence: TACATTGACGTACTGCATGTAT
Locus tag: Salmonelentericaenterica_010100047997
Salmonelentericaenterica_010100047997 -159 3.1 TACATTGACGTACTGCATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: cyclic AMP receptor protein
Escherichia coli str. K-12 substr. MG1655 b3357 -154 3.3 TACATTGATGTACTGCATGTAT
-136 3.3 GTATGCAAAGGACGTCACATTA
Salmonella typhimurium LT2 STM3466 -159 3.1 TACATTGACGTACTGCATGTAT
Citrobacter koseri ATCC BAA-895 CKO_04777 -160 3.1 TACATTGACGTACTGCATGTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03743 -158 3.3 TACATTGATGTACTGCATGTAT
Enterobacter sp. 638 Ent638_3784 -128 2.9 AAACATTACAGGCTGCAAACAT
Yersinia pestis KIM y3956 -309 3 AATTTAGACTACCCTTTCATTT
Serratia proteamaculans 568 Spro_4580 -121 3.5 ATTTATGACACGCCTCAAAACC
Proteus mirabilis HI4320 PMI2820 -135 3.3 TATTATAATCTATTCCTTATTA
Position: -138
Score: 3.7
Sequence: TGTTGTGATCATCCTCTTTTTT
Locus tag: Salmonelentericaenterica_010100048172
Salmonelentericaenterica_010100048172 -138 3.7 TGTTGTGATCATCCTCTTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aphA
Ortholog function: acid phosphatase/phosphotransferase
Escherichia coli str. K-12 substr. MG1655 b4055 -130 3.6 CATCCTGCTTTTCATCACAAAA
-57 4 TTTTGCAACAAATCTCACAATA
Salmonella typhimurium LT2 STM4249 -139 3.7 TGTTGTGATCATCCTCTTTTTT
Citrobacter koseri ATCC BAA-895 CKO_03845 -255 3.9 TATTGTGAATGCGTGTACAGAA
-224 3.7 GTGTGTGTGGTTTATCACACAT
Enterobacter sp. 638 Ent638_0259 -57 3.8 TTTTTTGACCATTCGCTCAATT
Edwardsiella tarda EIB202 ETAE_3469 -150 5 TTTTGTGATGAATGTCACGTAT
-98 3.7 AACATAGATCATGATCACATTA
Proteus mirabilis HI4320 PMI0729 -148 4.3 AAGTGTTAGATAGATCAAAAAA
-87 4.3 TAACGTGCGCTATATCTCATTT
-34 4.3 TTCTGTGATTAATATAAAAATT
Position: -262
Score: 4.6
Sequence: ATGTGTGATCTGGTGCACGCTT
Position: -211
Score: 4.1
Sequence: TTTTGTACGATCGTTCACACTT
Locus tag: Salmonelentericaenterica_010100048546
Salmonelentericaenterica_010100048546 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase subunit I
Escherichia coli str. K-12 substr. MG1655 b3739 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3872 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00079 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04144 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4125 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3481 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4142 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0001 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3526 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3057 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0047 -265 5.7 TTATGTGATTTAAATCACATTT
Position: 0
Score: 4
Sequence: ATGTTTGATAAACGTCACCGTA
Locus tag: Salmonelentericaenterica_010100048676
Salmonelentericaenterica_010100048676 0 4 ATGTTTGATAAACGTCACCGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylR
Ortholog function: Xylose activator XylR (AraC family)
Escherichia coli str. K-12 substr. MG1655 b3569 -253 4.2 AAGTGTGCGCTCGCTCGCAAAA
-163 3.7 AAGTAAGATCTCGGTCATAAAT
Salmonella typhimurium LT2 STM3662 -251 4.8 AAATGTGCTCTGGCTCTCAAAA
-124 4.5 TGCTGTGATGAATTTCGCATAA
Citrobacter koseri ATCC BAA-895 CKO_05026 -254 4.1 AAGTGTGCGCCGCCTCGCAAAA
-162 3.8 AAGTACGATCTCGGTCATAATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03933 -234 3.8 AAATACGATCGCCGTCATAATT
Enterobacter sp. 638 Ent638_0152 -264 3.9 AAACGTGCGCTGGCTCCCAAAA
Yersinia pestis KIM y4053 -264 4.8 AATTGTGGTGTAGATCTCATAA
-160 4.2 AAACATGATCGTTATCATAAAA
Serratia proteamaculans 568 Spro_0102 -259 4.4 AAATGTGCGACAGATCTCATAA
-166 3.7 AAGCATGACCGCCATCATAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0101 -272 4.5 AAATATGACCCGCATCAAAAAA
Proteus mirabilis HI4320 PMI1276 -93 4.9 TTGTGTGATAGTAATCACATAG
Position: -164
Score: 4
Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: Salmonelentericaenterica_010100048936
Salmonelentericaenterica_010100048936 -164 4 AGGTGTTAAATTGATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyaA
Ortholog function: Adenylate cyclase (EC 4.6.1.1)
Salmonella typhimurium LT2 STM3939 -164 4 AGGTGTTAAATTGATCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00148 -174 4 AGGTGTTAAATTGATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04305 -147 4 AGGTGTTAAATTGATCACGTTT
Position: -213
Score: 4.2
Sequence: AAACGTGATCAATTTAACACCT
Locus tag: Salmonelentericaenterica_010100048941
Salmonelentericaenterica_010100048941 -213 4.2 AAACGTGATCAATTTAACACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemC
Ortholog function: porphobilinogen deaminase
Escherichia coli str. K-12 substr. MG1655 b3805 -236 4.2 AAACGTGATCAATTTAACACCT
Salmonella typhimurium LT2 STM3938 -219 4.2 AAACGTGATCAATTTAACACCT
Citrobacter koseri ATCC BAA-895 CKO_00147 -220 4.2 AAACGTGATCAATTTAACACCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04304 -232 4.2 AAACGTGATCAATTTAACACCT
Enterobacter sp. 638 Ent638_3987 -211 4.2 AAACGTGATCAATCTAACACCT
Serratia proteamaculans 568 Spro_0178 -223 4.2 AAACGTGATCAATCTAACACCT
Edwardsiella tarda EIB202 ETAE_0118 -205 4.2 AAACGTGATCAATTTAACACCT
Position: -76
Score: 3.4
Sequence: GAATTTGATTTACATCAATAAG
Locus tag: Salmonelentericaenterica_010100048991
Salmonelentericaenterica_010100048991 -76 3.4 GAATTTGATTTACATCAATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: nitrite reductase (NAD(P)H) subunit
Escherichia coli str. K-12 substr. MG1655 b3365 -124 3.2 AAAATTTATACAAATCAGCAAT
-76 3.4 GAATTTGATTTACATCAATAAG
Salmonella typhimurium LT2 STM3474 -76 3.4 GAATTTGATTTACATCAATAAG
Citrobacter koseri ATCC BAA-895 CKO_04789 -76 3.4 GAATTTGATTTACATCAATAAG
Enterobacter sp. 638 Ent638_3793 -76 3.3 GTATTTGATTTGCATCAATAAG
Yersinia pestis KIM y3945 -75 3.7 CAAATTGATTTACATCAAGAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4079 -186 4.2 AAGCGTGCTATAGATCTCACTT
Proteus mirabilis HI4320 PMI1479 -129 3.5 TTTTGTGCACTTTATTAACAAT
Position: -92
Score: 4.5
Sequence: CTTTGTGATAAAACTCACTTTT
Locus tag: Salmonelentericaenterica_010100049051
Salmonelentericaenterica_010100049051 -92 4.5 CTTTGTGATAAAACTCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqeF
Ortholog function: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Escherichia coli str. K-12 substr. MG1655 b2844 -91 4.6 CTTTGTGATAAAAATCACTTTT
Salmonella typhimurium LT2 STM3019 -92 4.5 CTTTGTGATAAAACTCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_04222 -92 4.6 CTTTGTGATAAAACTCACCATT
Position: -176
Score: 4.2
Sequence: ATTTGAGATCGGGATCACTGAT
Locus tag: Salmonelentericaenterica_010100049301
Salmonelentericaenterica_010100049301 -176 4.2 ATTTGAGATCGGGATCACTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdaC
Ortholog function: Serine transporter
Escherichia coli str. K-12 substr. MG1655 b2796 -179 4.2 ATTTGAGATCAAGATCACTGAT
Salmonella typhimurium LT2 STM2970 -176 4.2 ATTTGAGATCGGGATCACTGAT
Citrobacter koseri ATCC BAA-895 CKO_04152 -176 4.1 ATTTGGGATCGCGATCACTGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03139 -158 4.2 ATTTGAGATCGCGATCACTGAT
Enterobacter sp. 638 Ent638_3249 -176 4.1 ATTTGGGATCAGGATCACTGAT
Erwinia amylovora ATCC 49946 EAM_1294 -300 3.6 ATTTGTTAAAAATCGCAAAAAA
-180 3.9 AAATGTGATTCCGATCACCGGC
Yersinia pestis KIM y2862 -286 4.3 AATTGAGATCACGATCACGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3158 -195 3.7 TTCTGTGATCGCCTCAATATTA
Proteus mirabilis HI4320 PMI0672 -283 4.3 ATTTGAGATGGTGATCACGGTA
Position: -42
Score: 4.5
Sequence: AATTGTGACAATTGTCATATTA
Locus tag: Salmonelentericaenterica_010100049906
Salmonelentericaenterica_010100049906 -42 4.5 AATTGTGACAATTGTCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yegH
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b2063 -43 4.6 AATTGTGACATTTGTCATACAA
Salmonella typhimurium LT2 STM2119 -42 4.5 AATTGTGACAATTGTCATATTA
Citrobacter koseri ATCC BAA-895 CKO_00719 -42 4.5 AATTGTGACAACTGTCATATAA
Enterobacter sp. 638 Ent638_2677 -42 4.4 AAGTGTGACAAATGTCATATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1559 -193 3.9 ATTTGTTAATGTGATCACATGT
Position: -71
Score: 3.9
Sequence: TTTTGTGGTATGGTTTAAACAT
Locus tag: Salmonelentericaenterica_010100049911
Salmonelentericaenterica_010100049911 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Salmonella typhimurium LT2 STM2670 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -159 3.8 TATTGTTATACGCATCGCGCCA
Edwardsiella tarda EIB202 ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Proteus mirabilis HI4320 PMI0387 -214 4.5 TTATTTTATCTTAGTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -262 3.6 TGTTTTGATATTGATTTTATTT
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