Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AllR regulog to Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67

Reference regulog properties
Source regulog: AllR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: Allantoin utilization
Effector: Allantoin
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Orthologous TF(s) SC0557
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Locus tag Position Score Sequence
Position: -122
Score: 6.6
Sequence: TTGGAATATTTTTCCAA
Locus tag: SC0555
SC0555 -122 6.6 TTGGAATATTTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allS
Ortholog function: DNA-binding transcriptional activator of the allD operon
Escherichia coli str. K-12 substr. MG1655 b0504 -124 6.6 TTGGAATATTTTTCCAA
Salmonella typhimurium LT2 STM0514 -122 6.6 TTGGAATATTTTTCCAA
Position: -121
Score: 6.6
Sequence: TTGGAAAAATATTCCAA
Locus tag: SC0556
SC0556 -121 6.6 TTGGAAAAATATTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allA
Ortholog function: ureidoglycolate hydrolase
Escherichia coli str. K-12 substr. MG1655 b0505 -122 6.6 TTGGAAAAATATTCCAA
Salmonella typhimurium LT2 STM0515 -121 6.6 TTGGAAAAATATTCCAA