Propagation of FruR regulog to Yersinia pestis biovar Orientalis str. F1991016
| Source regulog: | FruR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | activator (repressor) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | Fructose-1-phosphate; Fructose-1,6-diphosphate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis biovar Orientalis str. F1991016 |
| Orthologous TF(s) | YpF1991016_0870 |
| Regulated genes | 14 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -277
Score: 4.5 Sequence: GCAGAATCGATTCGGC
Locus tag: YpF1991016_0559
|
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| YpF1991016_0559 | -277 | 4.5 | GCAGAATCGATTCGGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: Phosphoglycerate mutase (EC 5.4.2.1) | ||||
| Erwinia amylovora ATCC 49946 | EAM_1194 | -204 | 4.5 | GGTGAAACGTATCAGT |
| Yersinia pestis KIM | y3048 | -193 | 4.5 | GCAGAATCGATTCGGC |
| Serratia proteamaculans 568 | Spro_1288 | -151 | 4.1 | GCCTGAACGATTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1382 | -150 | 4.5 | GCTGAAACGGTAAAGC |
| Proteus mirabilis HI4320 | PMI0590 | -180 | 4.4 | GCTTTATCGATTAAGC |
|
Position: -161
Score: 5.4 Sequence: GCTGAAGCGTTTCAGT
Locus tag: YpF1991016_1164
|
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| YpF1991016_1164 | -161 | 5.4 | GCTGAAGCGTTTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epd | ||||
| Ortholog function: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2927 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Salmonella typhimurium LT2 | STM3070 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04297 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03356 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Enterobacter sp. 638 | Ent638_3340 | -139 | 5.4 | GCTGAAGCGTTTCAGT |
| Erwinia amylovora ATCC 49946 | EAM_2813 | -131 | 5.4 | GCTGAAGCGTTTCAGT |
| Yersinia pestis KIM | y3309 | -161 | 5.4 | GCTGAAGCGTTTCAGT |
| Serratia proteamaculans 568 | Spro_3946 | -211 | 5.4 | GCTGAAGCGTTTCAGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3913 | -119 | 5.4 | GCTGAAGCGTTTCAGT |
| Edwardsiella tarda EIB202 | ETAE_2958 | -136 | 5.4 | GCTGAAGCGTTTCAGT |
| Proteus mirabilis HI4320 | PMI0241 | -135 | 5.1 | GCTGAACCGTTTCAGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0955 | -139 | 5.2 | GCTGAATCGTTTCATT |
|
Position: 15
Score: 3.6 Sequence: CCTGAATTGATTGAGA
Locus tag: YpF1991016_1566
|
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| YpF1991016_1566 | 15 | 3.6 | CCTGAATTGATTGAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoH | ||||
| Ortholog function: NADH dehydrogenase I chain H | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2282 | -283 | 3.6 | ACGGACACGATTCAAC |
| Salmonella typhimurium LT2 | STM2322 | -283 | 3.6 | ACGGACACGATTCAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00514 | -283 | 3.6 | ACGGACACGATTCAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02672 | -375 | 3.6 | aCgGAcaCGATTCAaC |
| Enterobacter sp. 638 | Ent638_2826 | -283 | 3.6 | ACGGACACGATTCAAC |
| Erwinia amylovora ATCC 49946 | EAM_2286 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Yersinia pestis KIM | y1636 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Serratia proteamaculans 568 | Spro_3302 | -263 | 4.3 | ACTGACACGATTTAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3022 | -258 | 4.4 | ACTGACTCGATTTAGC |
| Edwardsiella tarda EIB202 | ETAE_2379 | -135 | 4.7 | GCTGGAGCGATTCGGC |
| Proteus mirabilis HI4320 | PMI1756 | -244 | 4.3 | aCTGAcaCGTTTtAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3083 | -254 | 4.3 | ACTGACACGTTTTAGC |
|
Position: -257
Score: 4.4 Sequence: ACTGACTCGATTTAGC
Position: -72
Score: 3.5 Sequence: TTTGAATCGATGTGGT
Locus tag: YpF1991016_1572
|
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| YpF1991016_1572 | -257 | 4.4 | ACTGACTCGATTTAGC | |
| -72 | 3.5 | TTTGAATCGATGTGGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoA | ||||
| Ortholog function: NADH dehydrogenase I chain A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2288 | -283 | 3.6 | ACGGACACGATTCAAC |
| Salmonella typhimurium LT2 | STM2328 | -283 | 3.6 | ACGGACACGATTCAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00508 | -283 | 3.6 | ACGGACACGATTCAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02678 | -375 | 3.6 | aCgGAcaCGATTCAaC |
| Enterobacter sp. 638 | Ent638_2832 | -283 | 3.6 | ACGGACACGATTCAAC |
| Erwinia amylovora ATCC 49946 | EAM_2292 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Yersinia pestis KIM | y1630 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Serratia proteamaculans 568 | Spro_3308 | -263 | 4.3 | ACTGACACGATTTAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3028 | -258 | 4.4 | ACTGACTCGATTTAGC |
| Edwardsiella tarda EIB202 | ETAE_2385 | -135 | 4.7 | GCTGGAGCGATTCGGC |
| Proteus mirabilis HI4320 | PMI1762 | -244 | 4.3 | aCTGAcaCGTTTtAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3089 | -254 | 4.3 | ACTGACACGTTTTAGC |
|
Position: -144
Score: 4.9 Sequence: CTTGAATCAATTCAGC
Locus tag: YpF1991016_2174
|
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| YpF1991016_2174 | -144 | 4.9 | CTTGAATCAATTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfkA | ||||
| Ortholog function: 6-phosphofructokinase (EC 2.7.1.11) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3916 | -121 | 5.1 | CCTGAATCAATTCAGC |
| Salmonella typhimurium LT2 | STM4062 | -122 | 5.1 | CCTGAATCAATTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_03085 | -128 | 5.1 | CCTGAATCAATTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04223 | -119 | 5.1 | CCTGAATCAATTCAGC |
| Enterobacter sp. 638 | Ent638_4056 | -170 | 5.1 | CCTGAATCAATTCAGC |
| Erwinia amylovora ATCC 49946 | EAM_0103 | -128 | 3.9 | CCTCAACCAATTCAGC |
| Yersinia pestis KIM | y0059 | -144 | 4.9 | CTTGAATCAATTCAGC |
| Serratia proteamaculans 568 | Spro_4807 | -141 | 4.9 | CTTGAATCAATTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4307 | -136 | 5.1 | CCTGAATCAATTCAGC |
| Edwardsiella tarda EIB202 | ETAE_3450 | -219 | 5.1 | CCTGAATCAATTCAGC |
| Proteus mirabilis HI4320 | PMI3203 | -119 | 5.1 | GTTGAATCAATTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4774 | -141 | 5.1 | GTTGAATCAATTCAGC |
|
Position: -258
Score: 5.1 Sequence: GTTGAATGGTTTCAGC
Locus tag: YpF1991016_0793
|
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| YpF1991016_0793 | -258 | 5.1 | GTTGAATGGTTTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pykF | ||||
| Ortholog function: Pyruvate kinase (EC 2.7.1.40) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1676 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Salmonella typhimurium LT2 | STM1378 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01709 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02133 | -221 | 4.9 | CTTGAATGGTTTCAGC |
| Enterobacter sp. 638 | Ent638_1768 | -221 | 5 | GGTGAATGGTTTCAGC |
| Erwinia amylovora ATCC 49946 | EAM_1657 | -226 | 4.6 | TTTGAATGGTTTCAGC |
| Yersinia pestis KIM | y1944 | -258 | 5.1 | GTTGAATGGTTTCAGC |
| Serratia proteamaculans 568 | Spro_2187 | -239 | 5.1 | GTTGAATGGTTTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1867 | -241 | 4.7 | ATTGAATGGTTTCAGC |
| Edwardsiella tarda EIB202 | ETAE_1850 | -230 | 5.1 | GTTGAATGGTTTCAGC |
| Proteus mirabilis HI4320 | PMI1405 | -269 | 5 | GTTGAAAGGTTTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2613 | -344 | 5.1 | GTTGAATGGTTTCAGC |
|
Position: -332
Score: 5.1 Sequence: GCTGAATCGATTTACC
Locus tag: YpF1991016_2058
|
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| YpF1991016_2058 | -332 | 5.1 | GCTGAATCGATTTACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptsH | ||||
| Ortholog function: PTS family, Hpr protein, phosphohistidinoprotein-hexose phosphotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2415 | -219 | 4.7 | GCTGAATCGATTTTAT |
| Salmonella typhimurium LT2 | STM2431 | -219 | 4.7 | GCTGAATCGATTTTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00377 | -219 | 5.1 | GCTGAATCGATTTAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02762 | -216 | 4.7 | GCTGAATCGATTTTAT |
| Enterobacter sp. 638 | Ent638_2943 | -154 | 4.7 | GCTGAATCGATTTTAT |
| Erwinia amylovora ATCC 49946 | EAM_2391 | -229 | 5.1 | GCTGAATCGATTTACC |
| Yersinia pestis KIM | y1488 | -332 | 5.1 | GCTGAATCGATTTACC |
| Serratia proteamaculans 568 | Spro_3448 | -231 | 5 | GCTGAATCGATTTACT |
| Edwardsiella tarda EIB202 | ETAE_1132 | -211 | 5.1 | GCTGAATCGATTTAAC |
|
Position: -128
Score: 4.6 Sequence: GCTGAAACGTTTTTAT
Locus tag: YpF1991016_2080
|
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| YpF1991016_2080 | -128 | 4.6 | GCTGAAACGTTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glk | ||||
| Ortholog function: Glucokinase (EC 2.7.1.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2388 | -134 | 4.9 | GCTGAAACGATAAAGT |
| Salmonella typhimurium LT2 | STM2403 | -134 | 4 | GCTGAAACAAGAAAGT |
| Citrobacter koseri ATCC BAA-895 | CKO_00412 | -134 | 4.9 | GCTGAAACGATAAAGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02738 | -193 | 4.9 | GCTGAAACGATAAAGT |
| Enterobacter sp. 638 | Ent638_2921 | -134 | 4.5 | GCTGAAACGGTAAAGT |
| Yersinia pestis KIM | y1505 | -125 | 4.6 | GCTGAAACGTTTTTAT |
| Serratia proteamaculans 568 | Spro_3407 | -127 | 3.9 | GCTGAAACGTTTTTTG |
|
Position: -178
Score: 5 Sequence: CTTGAAGCGTTTCAGT
Locus tag: YpF1991016_4448
|
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| YpF1991016_4448 | -178 | 5 | CTTGAAGCGTTTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | ||||
| Erwinia amylovora ATCC 49946 | EAM_3380 | -136 | 4.4 | ACTGAAGTGATTCAGC |
| Yersinia pestis KIM | y3836 | -178 | 5 | CTTGAAGCGTTTCAGT |
| Serratia proteamaculans 568 | Spro_0153 | -162 | 4.6 | GCTGGCGCGTTTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4362 | -159 | 4.3 | GCTGACGTGATTCAGC |
| Edwardsiella tarda EIB202 | ETAE_3379 | -157 | 4 | TCTTATGCGTTTCAGC |
|
Position: -309
Score: 4.7 Sequence: GCTGAATGGTGTCAGC
Locus tag: YpF1991016_3094
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| YpF1991016_3094 | -309 | 4.7 | GCTGAATGGTGTCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1241 | -264 | 4.6 | GCTGAAAGGTGTCAGC |
| Salmonella typhimurium LT2 | STM1749 | -265 | 4.6 | GCTGAAAGGTGTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01318 | -265 | 4.6 | GCTGAAAGGTGTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -260 | 4.5 | GCTGAAAGGTATCAGC |
| Enterobacter sp. 638 | Ent638_2304 | -276 | 4.5 | GCTGAAAGGTATCAGC |
| Erwinia amylovora ATCC 49946 | EAM_1900 | -246 | 4.6 | GCTGAATGGTATCAGC |
| Yersinia pestis KIM | y2023 | -309 | 4.7 | GCTGAATGGTGTCAGC |
| Serratia proteamaculans 568 | Spro_2704 | -301 | 4.7 | GCTGAATGGTGTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -338 | 4.7 | GCTGAATGGTGTCAGC |
| Edwardsiella tarda EIB202 | ETAE_1508 | -288 | 4.7 | GCTGAATGGTGTCAGC |
| Proteus mirabilis HI4320 | PMI1486 | -269 | 4.6 | GCTGAAAGGTGTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -162 | 4.5 | GCTGAAAGGAATCAGC |
|
Position: -276
Score: 3.7 Sequence: GTTGAGTGGAATCAGT
Position: -193
Score: 4.4 Sequence: GGTTGATCGATTCACC
Locus tag: YpF1991016_1040
|
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| YpF1991016_1040 | -276 | 3.7 | GTTGAGTGGAATCAGT | |
| -193 | 4.4 | GGTTGATCGATTCACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppsA | ||||
| Ortholog function: Phosphoenolpyruvate synthase (EC 2.7.9.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1702 | -102 | 4.6 | GCTTGAACGATTCACC |
| Salmonella typhimurium LT2 | STM1349 | -103 | 4.6 | GCTTGAACGATTCACC |
| Citrobacter koseri ATCC BAA-895 | CKO_01725 | -102 | 4.6 | GCTTGAACGATTCACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02160 | -108 | 4.6 | GCTTGAACGATTCACC |
| Enterobacter sp. 638 | Ent638_1745 | -103 | 4.4 | GCTTACACGATTCACC |
| Erwinia amylovora ATCC 49946 | EAM_1646 | -104 | 3.7 | GCCAGAGCGATTCAAC |
| Yersinia pestis KIM | y1930 | -193 | 4.4 | GGTTGATCGATTCACC |
| Serratia proteamaculans 568 | Spro_2174 | -132 | 4.4 | GGTTGATCGATTCACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1853 | -117 | 4.4 | GGTTGATCGATTCACC |
| Edwardsiella tarda EIB202 | ETAE_1789 | -113 | 4.4 | GGTGTAACGATTCACC |
| Proteus mirabilis HI4320 | PMI1421 | -124 | 4.4 | GGTTGATCGATTCACC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2628 | -114 | 4.4 | GGTTGATCGATTCACC |
|
Position: -78
Score: 3.7 Sequence: ATTGACACGATTCCGC
Locus tag: YpF1991016_2710
|
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| YpF1991016_2710 | -78 | 3.7 | ATTGACACGATTCCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapA | ||||
| Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1779 | -87 | 3.7 | ATTGACACGATTCCGC |
| Salmonella typhimurium LT2 | STM1290 | -87 | 3.7 | ATTGACACGATTCCGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01800 | -87 | 3.7 | ATTGACACGATTCCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01197 | -87 | 3.7 | ATTGACACGATTCCGC |
| Enterobacter sp. 638 | Ent638_1675 | -87 | 3.7 | ATTGACACGATTCCGC |
| Erwinia amylovora ATCC 49946 | EAM_1931 | -78 | 3.7 | ATTGACACGATTCCGC |
| Yersinia pestis KIM | y2165 | -78 | 3.7 | ATTGACACGATTCCGC |
| Serratia proteamaculans 568 | Spro_2728 | -87 | 3.7 | ATTGACACGATTCCGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2344 | -93 | 3.7 | ATTGACACGATTCCGC |
| Edwardsiella tarda EIB202 | ETAE_1483 | -87 | 3.7 | ATTGACACGATTCCGC |
| Proteus mirabilis HI4320 | PMI1504 | -88 | 3.7 | ATTGACACGATTCCGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2558 | -88 | 3.7 | ATTGACACGATTCCGC |
|
Position: -255
Score: 4.9 Sequence: GCTGAAGCGATACAAC
Locus tag: YpF1991016_4224
|
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| YpF1991016_4224 | -255 | 4.9 | GCTGAAGCGATACAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: Catabolite gene activator (cAMP receptor protein), CRP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3357 | -220 | 4.3 | GCTGAAGCGAGACACC |
| Salmonella typhimurium LT2 | STM3466 | -225 | 4.3 | GCTGAAGCGAGACACC |
| Citrobacter koseri ATCC BAA-895 | CKO_04777 | -227 | 4.3 | GCTGAAGCGAGACACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03743 | -224 | 4.3 | GCTGAAGCGAGACACC |
| Enterobacter sp. 638 | Ent638_3784 | -228 | 4.3 | GCTGAAGCGAGACACC |
| Erwinia amylovora ATCC 49946 | EAM_3225 | -284 | 4.4 | GCTGAAGCGAGACAAC |
| Yersinia pestis KIM | y3956 | -255 | 4.9 | GCTGAAGCGATACAAC |
| Serratia proteamaculans 568 | Spro_4580 | -300 | 4.4 | GCTGAAGCGAGACAAC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4064 | -296 | 4.4 | GCTGAAGCGAGACAAC |
| Edwardsiella tarda EIB202 | ETAE_3299 | -242 | 4.5 | GCTGAAGCGAGACAGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0395 | -241 | 4.2 | GCTGAAACAATACAAG |
|
Position: -157
Score: 5 Sequence: CCTGAATCGATTCATT
Locus tag: YpF1991016_4302
|
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| YpF1991016_4302 | -157 | 5 | CCTGAATCGATTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manX | ||||
| Ortholog function: PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) | ||||
| Yersinia pestis KIM | y2551 | -157 | 5 | CCTGAATCGATTCATT |