Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FadR regulog to Yersinia pestis biovar Mediaevalis str. K1973002

Reference regulog properties
Source regulog: FadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis biovar Mediaevalis str. K1973002
Orthologous TF(s) YpK1973002_0406
Regulated genes 8
Built upon 130 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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Predicted regulatory interactions in Yersinia pestis biovar Mediaevalis str. K1973002
Locus tag Position Score Sequence
Position: -67
Score: 3.8
Sequence: TTGAGGTCCTACCAGTT
Locus tag: YpK1973002_2509
YpK1973002_2509 -67 3.8 TTGAGGTCCTACCAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadM
Ortholog function: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Escherichia coli str. K-12 substr. MG1655 b0443 -59 4.5 AAGAGGTCATACCAGTT
Salmonella typhimurium LT2 STM0454 -70 3.9 TAGAGGTCATACCAGTT
Citrobacter koseri ATCC BAA-895 CKO_02717 -59 4.4 ATGAGGTCATACCAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00405 -54 4.3 AAGTGGTGTGACCTCTT
Enterobacter sp. 638 Ent638_0910 -58 4.1 AAGAGGTCATACCAGTC
Yersinia pestis KIM y1033 -49 3.8 TTGAGGTCCTACCAGTT
Serratia proteamaculans 568 Spro_1101 -97 4.3 TACAGGTCTTACCAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1154 -44 4.4 ATCAGGTCGTACCAGTT
Position: -85
Score: 3.7
Sequence: CGCTGATCGGACTTGTT
Locus tag: YpK1973002_3611
YpK1973002_3611 -85 3.7 CGCTGATCGGACTTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabB
Ortholog function: 3-oxoacyl-(acyl carrier protein) synthase
Escherichia coli str. K-12 substr. MG1655 b2323 -83 3.3 GGCTGATCGGACTTGTT
Salmonella typhimurium LT2 STM2378 -84 3.3 GGCTGATCGGACTTGTT
Citrobacter koseri ATCC BAA-895 CKO_00462 -83 3.3 GGCTGATCGGACTTGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02713 -83 3.8 GTCTGATCGGACTTGTT
Enterobacter sp. 638 Ent638_2871 -82 3.3 GGCTGATCGGACTTGTT
Erwinia amylovora ATCC 49946 EAM_2336 -82 3.9 AGCTGATCGGACTTGTT
Yersinia pestis KIM y1591 -85 3.7 CGCTGATCGGACTTGTT
Serratia proteamaculans 568 Spro_3368 -84 3.7 CGCTGATCGGACTTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3063 -86 3.3 GGCTGATCGGACTTGTT
Edwardsiella tarda EIB202 ETAE_2421 -126 3.7 ATCTGGTTTTACCAGCG
Proteus mirabilis HI4320 PMI1795 -89 3.3 TCCTGATCGGACTTGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu3184 -96 3.3 TCCTGATCGGACTTGTT
Position: -66
Score: 5
Sequence: ATCAGGTCAGACCTGTT
Locus tag: YpK1973002_3624
YpK1973002_3624 -66 5 ATCAGGTCAGACCTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadI
Ortholog function: FadI component of anaerobic fatty acid oxidation complex
Escherichia coli str. K-12 substr. MG1655 b2342 -43 5.1 ATCAGGTCAGACCACTT
Salmonella typhimurium LT2 STM2389 -42 4.8 ATCAGGTCAGACCACTA
Citrobacter koseri ATCC BAA-895 CKO_00448 -43 5.1 ATCAGGTCAGACCACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02724 -44 5.1 ATCAGGTCAGACCACTT
Enterobacter sp. 638 Ent638_2882 -48 5.1 ATCAGGTCAGACCACTT
Yersinia pestis KIM y1579 -66 5 ATCAGGTCAGACCTGTT
Serratia proteamaculans 568 Spro_3379 -56 5 ATCAGGTCAGACCTCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3079 -53 5 ATCAGGTCTGACCTGTT
Proteus mirabilis HI4320 PMI1808 -50 5 ATCAGGTCAGACCTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu3201 -81 4.7 ATCAGGTCAGACCTGTC
Position: -99
Score: 4.2
Sequence: CACTGGTCTGCTTTGTC
Locus tag: YpK1973002_3626
YpK1973002_3626 -99 4.2 CACTGGTCTGCTTTGTC
Supported by regulated orthologs from reference regulons