Propagation of SdaR regulog to Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066
| Source regulog: | SdaR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | SdaR |
| Regulation mode: | activator |
| Biological process: | Glucarate utilization; Galactarate utilization |
| Effector: | Glycerate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 |
| Orthologous TF(s) | Salmentericaenterica_010100022828, SeH_A3011 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -276
Score: 4.8 Sequence: CATTGTGCAAACGCTCATTA
Position: -233
Score: 5.1 Sequence: TTTTGAGCATACGCCCATGA
Locus tag: Salmentericaenterica_010100016770
|
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| Salmentericaenterica_010100016770 | -276 | 4.8 | CATTGTGCAAACGCTCATTA | |
| -233 | 5.1 | TTTTGAGCATACGCCCATGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: garD | ||||
| Ortholog function: D-galactarate dehydratase (EC 4.2.1.42) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3128 | -250 | 4.5 | CATTGTGCAAATGCTAATTT |
| -208 | 6 | TTTTGAGCATATGCACATAA | ||
| Salmonella typhimurium LT2 | STM3250 | -276 | 4.8 | CATTGTGCAAACGCTCATTA |
| -233 | 5.1 | TTTTGAGCATACGCCCATGA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04527 | -223 | 5.6 | TTTTGAGCATTTGCACAACG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03540 | -206 | 4.7 | AATTGTGCTTATGCCATAAG |
| Enterobacter sp. 638 | Ent638_3570 | -224 | 5.4 | ATTTGAGCATATGCACAACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3578 | -316 | 4.6 | GTTGGTGCACTTGCCCTATA |
| -140 | 4.2 | CTTAGGTCAATTGCATAATG | ||
|
Position: -316
Score: 5.1 Sequence: TCATGGGCGTATGCTCAAAA
Position: -273
Score: 4.8 Sequence: TAATGAGCGTTTGCACAATG
Locus tag: Salmentericaenterica_010100016785
|
||||
| Salmentericaenterica_010100016785 | -316 | 5.1 | TCATGGGCGTATGCTCAAAA | |
| -273 | 4.8 | TAATGAGCGTTTGCACAATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: garL | ||||
| Ortholog function: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3126 | -186 | 6 | TTATGTGCATATGCTCAAAA |
| -144 | 4.5 | AAATTAGCATTTGCACAATG | ||
| Salmonella typhimurium LT2 | STM3249 | -316 | 5.1 | TCATGGGCGTATGCTCAAAA |
| -273 | 4.8 | TAATGAGCGTTTGCACAATG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04523 | -203 | 5.6 | CGTTGTGCAAATGCTCAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03538 | -206 | 4.7 | CTTATGGCATAAGCACAATT |
| Enterobacter sp. 638 | Ent638_3568 | -208 | 5.4 | GGTTGTGCATATGCTCAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3574 | -358 | 4.1 | TGCTGGGCTATTGCCCAATG |
|
Position: -71
Score: 5.8 Sequence: TTTTGTGCATTTGCACAATG
Locus tag: Salmentericaenterica_010100022828
|
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| Salmentericaenterica_010100022828 | -71 | 5.8 | TTTTGTGCATTTGCACAATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdaR | ||||
| Ortholog function: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0162 | -69 | 5.3 | CTTTAGGCATTTGCACAATG |
| Salmonella typhimurium LT2 | STM0210 | -71 | 5.8 | TTTTGTGCATTTGCACAATG |
| Citrobacter koseri ATCC BAA-895 | CKO_03205 | -17 | 5.1 | GTTTGTGCAGATGCACAATG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00177 | -17 | 5.4 | CTTAGTGCAAATGCACAATG |
| Enterobacter sp. 638 | Ent638_0702 | -71 | 5.3 | CTTTGTGCATTCGCACAATG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3300 | -80 | 4.3 | CTTTGTTAATTTGCACAATG |