Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NadR regulog to Escherichia coli O157:H7 str. EC4401

Reference regulog properties
Source regulog: NadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: NadR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: NAD
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli O157:H7 str. EC4401
Orthologous TF(s) EcoliO157_010100019296
Regulated genes 3
Built upon 27 sites [see more]
Predicted regulatory interactions in Escherichia coli O157:H7 str. EC4401
Locus tag Position Score Sequence
Position: -47
Score: 5.9
Sequence: TGTTTATTGTACTAAACG
Locus tag: EcoliO157_010100020411
EcoliO157_010100020411 -47 5.9 TGTTTATTGTACTAAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncB
Ortholog function: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Escherichia coli str. K-12 substr. MG1655 b0931 -47 5.9 TGTTTATTGTACTAAACG
Salmonella typhimurium LT2 STM1004 -47 5.9 TGTTTATTGTACTAAACG
Citrobacter koseri ATCC BAA-895 CKO_02134 -47 5.9 TGTTTATTGTACTAAACG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00967 -118 5.6 TGTTCAATATATTAAACT
Enterobacter sp. 638 Ent638_1450 -47 5.9 TGTTTATTGTACTAAACG
Serratia proteamaculans 568 Spro_1732 -249 5.3 TGTTTAAAATAATTAACA
Position: -24
Score: 6.4
Sequence: TGTTTAGTAAATTAAACA
Locus tag: EcoliO157_010100024192
EcoliO157_010100024192 -24 6.4 TGTTTAGTAAATTAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadB
Ortholog function: L-aspartate oxidase (EC 1.4.3.16)
Escherichia coli str. K-12 substr. MG1655 b2574 -24 6.4 TGTTTAGTAAATTAAACA
Salmonella typhimurium LT2 STM2641 -24 6.4 TGTTTAGTAAATTAAACA
Citrobacter koseri ATCC BAA-895 CKO_00208 -24 6.4 TGTTTAGTAAATTAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02899 -24 6.4 TGTTTAGTAAATTAAACA
Enterobacter sp. 638 Ent638_3061 -24 6.4 TGTTTAGTAAATTAAACA
Position: -99
Score: 6.4
Sequence: TGTTTAGCATATAAAACA
Locus tag: ECH7EC4401_5665
ECH7EC4401_5665 -99 6.4 TGTTTAGCATATAAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadA
Ortholog function: Quinolinate synthetase (EC 4.1.99.-)
Escherichia coli str. K-12 substr. MG1655 b0750 -90 6.4 TGTTTAGCATATAAAACA
Salmonella typhimurium LT2 STM0756 -90 6.4 TGTTTAGCATATAAAACA
Citrobacter koseri ATCC BAA-895 CKO_02390 -88 6.4 TGTTTAGCATATAAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00754 -88 6.4 TGTTTAGCATATAAAACA
Enterobacter sp. 638 Ent638_1241 -92 6.5 TGTTTAGTATATAAAACA
Erwinia amylovora ATCC 49946 EAM_1187 -125 6.2 TGTTTATCATATAAAACA
Yersinia pestis KIM y3052 -95 6 TGTTTAGGATAAAAAACA
Serratia proteamaculans 568 Spro_1282 -154 5.3 TTTTTAATGAATTAAACA
-82 6.4 TGTTTAGTATATAAAACG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1378 -81 5.7 TGTTTAGGATAAAAAACT
Photorhabdus luminescens subsp. laumondii TTO1 plu1468 -94 6.6 TGTTTAGTATATTAAACA
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