Regulog NadR - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	NadR
Regulation mode:	repressor
Biological process:	NAD biosynthesis
Effector:	NAD
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 27 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - NadR
By effector - NAD
By pathway - NAD biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Escherichia coli str. K-12 substr. MG1655	4	3
Salmonella typhimurium LT2	4	3
Citrobacter koseri ATCC BAA-895	4	3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	4	3
Enterobacter sp. 638	4	3
Erwinia amylovora ATCC 49946	2	1
Yersinia pestis KIM	2	1
Serratia proteamaculans 568	4	3
Erwinia carotovora subsp. atroseptica SCRI1043	3	2
Edwardsiella tarda EIB202
Proteus mirabilis HI4320	2	2
Photorhabdus luminescens subsp. laumondii TTO1	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
nadA	* Escherichia coli str. K-12 substr. MG1655 Site: position = -90 score = 6.38088 sequence = TGTTTAGCATATAAAACA Gene: b0750: Quinolinate synthetase (EC 4.1.99.-)	* Salmonella typhimurium LT2 Site: position = -90 score = 6.38088 sequence = TGTTTAGCATATAAAACA Gene: STM0756: Quinolinate synthetase (EC 4.1.99.-)	* Citrobacter koseri ATCC BAA-895 Site: position = -88 score = 6.38088 sequence = TGTTTAGCATATAAAACA Gene: CKO_02390: Quinolinate synthetase (EC 4.1.99.-)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -88 score = 6.38088 sequence = TGTTTAGCATATAAAACA Gene: KPN_00754: Quinolinate synthetase (EC 4.1.99.-)	* Enterobacter sp. 638 Site: position = -92 score = 6.54383 sequence = TGTTTAGTATATAAAACA Gene: Ent638_1241: Quinolinate synthetase (EC 4.1.99.-)	* Erwinia amylovora ATCC 49946 Site: position = -125 score = 6.2066 sequence = TGTTTATCATATAAAACA Gene: EAM_1187: Quinolinate synthetase (EC 4.1.99.-)	* Yersinia pestis KIM Site: position = -95 score = 6.01517 sequence = TGTTTAGGATAAAAAACA Gene: y3052: Quinolinate synthetase (EC 4.1.99.-)	* Serratia proteamaculans 568 Site: position = -154 score = 5.31109 sequence = TTTTTAATGAATTAAACA Site: position = -82 score = 6.40867 sequence = TGTTTAGTATATAAAACG Gene: Spro_1282: Quinolinate synthetase (EC 4.1.99.-)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -81 score = 5.72376 sequence = TGTTTAGGATAAAAAACT Gene: ECA1378: Quinolinate synthetase (EC 4.1.99.-)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -94 score = 6.63406 sequence = TGTTTAGTATATTAAACA Gene: plu1468: Quinolinate synthetase (EC 4.1.99.-)	Quinolinate synthetase (EC 4.1.99.-)
pnuC	Escherichia coli str. K-12 substr. MG1655 Gene: b0751: Ribosyl nicotinamide transporter, PnuC-like	Salmonella typhimurium LT2 Gene: STM0757: Ribosyl nicotinamide transporter, PnuC-like	Citrobacter koseri ATCC BAA-895 Gene: CKO_02389: Ribosyl nicotinamide transporter, PnuC-like	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00755: Ribosyl nicotinamide transporter, PnuC-like	Enterobacter sp. 638 Gene: Ent638_1242: Ribosyl nicotinamide transporter, PnuC-like	Erwinia amylovora ATCC 49946 Gene: EAM_1188: Ribosyl nicotinamide transporter, PnuC-like	Yersinia pestis KIM Gene: y3051: Ribosyl nicotinamide transporter, PnuC-like	Serratia proteamaculans 568 Gene: Spro_1283: Ribosyl nicotinamide transporter, PnuC-like	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1379: Ribosyl nicotinamide transporter, PnuC-like	Edwardsiella tarda EIB202	* Proteus mirabilis HI4320 Site: position = -176 score = 5.77175 sequence = TATTTATTATATAAAACA Site: position = -125 score = 5.44986 sequence = TGTTTAATATTTTAAACT Gene: PMI0588: Ribosyl nicotinamide transporter, PnuC-like	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1469: Ribosyl nicotinamide transporter, PnuC-like	Ribosyl nicotinamide transporter, PnuC-like

CRON 2.
pncB	* Escherichia coli str. K-12 substr. MG1655 Site: position = -47 score = 5.92414 sequence = TGTTTATTGTACTAAACG Gene: b0931: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	* Salmonella typhimurium LT2 Site: position = -47 score = 5.92414 sequence = TGTTTATTGTACTAAACG Gene: STM1004: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	* Citrobacter koseri ATCC BAA-895 Site: position = -47 score = 5.92414 sequence = TGTTTATTGTACTAAACG Gene: CKO_02134: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -118 score = 5.60203 sequence = TGTTCAATATATTAAACT Gene: KPN_00967: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	* Enterobacter sp. 638 Site: position = -47 score = 5.92414 sequence = TGTTTATTGTACTAAACG Gene: Ent638_1450: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Erwinia amylovora ATCC 49946 Gene: EAM_1359: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Yersinia pestis KIM Gene: y2757: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	* Serratia proteamaculans 568 Site: position = -249 score = 5.28531 sequence = TGTTTAAAATAATTAACA Gene: Spro_1732: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2540: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Edwardsiella tarda EIB202 Gene: ETAE_1241: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Proteus mirabilis HI4320 Gene: PMI0767: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1754: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)

CRON 3.
nadB	* Escherichia coli str. K-12 substr. MG1655 Site: position = -24 score = 6.44916 sequence = TGTTTAGTAAATTAAACA Gene: b2574: L-aspartate oxidase (EC 1.4.3.16)	* Salmonella typhimurium LT2 Site: position = -24 score = 6.44916 sequence = TGTTTAGTAAATTAAACA Gene: STM2641: L-aspartate oxidase (EC 1.4.3.16)	* Citrobacter koseri ATCC BAA-895 Site: position = -24 score = 6.44916 sequence = TGTTTAGTAAATTAAACA Gene: CKO_00208: L-aspartate oxidase (EC 1.4.3.16)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -24 score = 6.44916 sequence = TGTTTAGTAAATTAAACA Gene: KPN_02899: L-aspartate oxidase (EC 1.4.3.16)	* Enterobacter sp. 638 Site: position = -24 score = 6.44916 sequence = TGTTTAGTAAATTAAACA Gene: Ent638_3061: L-aspartate oxidase (EC 1.4.3.16)	Erwinia amylovora ATCC 49946 Gene: EAM_2523: L-aspartate oxidase (EC 1.4.3.16)	Yersinia pestis KIM Gene: y1289: L-aspartate oxidase (EC 1.4.3.16)	Serratia proteamaculans 568 Gene: Spro_3677: L-aspartate oxidase (EC 1.4.3.16)	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3285: L-aspartate oxidase (EC 1.4.3.16)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3347: L-aspartate oxidase (EC 1.4.3.16)	L-aspartate oxidase (EC 1.4.3.16)

CRON 4.
nadR	Escherichia coli str. K-12 substr. MG1655 Gene: b4390: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Salmonella typhimurium LT2 Gene: STM4580.S: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Citrobacter koseri ATCC BAA-895 Gene: CKO_03396: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04845: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Enterobacter sp. 638 Gene: Ent638_0549: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Erwinia amylovora ATCC 49946 Gene: EAM_0623: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Yersinia pestis KIM	* Serratia proteamaculans 568 Site: position = -26 score = 6.33595 sequence = TGTTTAGCATATTAAACG Gene: Spro_0668: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -31 score = 5.64039 sequence = TGTTTAGTAGGCTAAACA Gene: ECA0463: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320 Gene: PMI2505: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0553: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)

CRON 5.
niaP	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	* Proteus mirabilis HI4320 Site: position = -48 score = 6.4711 sequence = TGTTTAGTATACTAAACA Gene: PMI0164: Niacin transporter, MFS family	Photorhabdus luminescens subsp. laumondii TTO1	Niacin transporter, MFS family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NadR - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --