Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NadR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: NadR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: NAD
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 27 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 4 3
Salmonella typhimurium LT2 4 3
Citrobacter koseri ATCC BAA-895 4 3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 4 3
Enterobacter sp. 638 4 3
Erwinia amylovora ATCC 49946 2 1
Yersinia pestis KIM 2 1
Serratia proteamaculans 568 4 3
Erwinia carotovora subsp. atroseptica SCRI1043 3 2
Edwardsiella tarda EIB202
Proteus mirabilis HI4320 2 2
Photorhabdus luminescens subsp. laumondii TTO1 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nadA
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -90
score = 6.38088
sequence = TGTTTAGCATATAAAACA

Gene: b0750: Quinolinate synthetase (EC 4.1.99.-)
*
Salmonella typhimurium LT2

Site:
position = -90
score = 6.38088
sequence = TGTTTAGCATATAAAACA

Gene: STM0756: Quinolinate synthetase (EC 4.1.99.-)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -88
score = 6.38088
sequence = TGTTTAGCATATAAAACA

Gene: CKO_02390: Quinolinate synthetase (EC 4.1.99.-)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -88
score = 6.38088
sequence = TGTTTAGCATATAAAACA

Gene: KPN_00754: Quinolinate synthetase (EC 4.1.99.-)
*
Enterobacter sp. 638

Site:
position = -92
score = 6.54383
sequence = TGTTTAGTATATAAAACA

Gene: Ent638_1241: Quinolinate synthetase (EC 4.1.99.-)
*
Erwinia amylovora ATCC 49946

Site:
position = -125
score = 6.2066
sequence = TGTTTATCATATAAAACA

Gene: EAM_1187: Quinolinate synthetase (EC 4.1.99.-)
*
Yersinia pestis KIM

Site:
position = -95
score = 6.01517
sequence = TGTTTAGGATAAAAAACA

Gene: y3052: Quinolinate synthetase (EC 4.1.99.-)
*
Serratia proteamaculans 568

Site:
position = -154
score = 5.31109
sequence = TTTTTAATGAATTAAACA

Site:
position = -82
score = 6.40867
sequence = TGTTTAGTATATAAAACG

Gene: Spro_1282: Quinolinate synthetase (EC 4.1.99.-)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -81
score = 5.72376
sequence = TGTTTAGGATAAAAAACT

Gene: ECA1378: Quinolinate synthetase (EC 4.1.99.-)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -94
score = 6.63406
sequence = TGTTTAGTATATTAAACA

Gene: plu1468: Quinolinate synthetase (EC 4.1.99.-)
Quinolinate synthetase (EC 4.1.99.-)
pnuC
 
Escherichia coli str. K-12 substr. MG1655

Gene: b0751: Ribosyl nicotinamide transporter, PnuC-like
 
Salmonella typhimurium LT2

Gene: STM0757: Ribosyl nicotinamide transporter, PnuC-like
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_02389: Ribosyl nicotinamide transporter, PnuC-like
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_00755: Ribosyl nicotinamide transporter, PnuC-like
 
Enterobacter sp. 638

Gene: Ent638_1242: Ribosyl nicotinamide transporter, PnuC-like
 
Erwinia amylovora ATCC 49946

Gene: EAM_1188: Ribosyl nicotinamide transporter, PnuC-like
 
Yersinia pestis KIM

Gene: y3051: Ribosyl nicotinamide transporter, PnuC-like
 
Serratia proteamaculans 568

Gene: Spro_1283: Ribosyl nicotinamide transporter, PnuC-like
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA1379: Ribosyl nicotinamide transporter, PnuC-like
 
Edwardsiella tarda EIB202
*
Proteus mirabilis HI4320

Site:
position = -176
score = 5.77175
sequence = TATTTATTATATAAAACA

Site:
position = -125
score = 5.44986
sequence = TGTTTAATATTTTAAACT

Gene: PMI0588: Ribosyl nicotinamide transporter, PnuC-like
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu1469: Ribosyl nicotinamide transporter, PnuC-like
Ribosyl nicotinamide transporter, PnuC-like
 
CRON 2.
pncB
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -47
score = 5.92414
sequence = TGTTTATTGTACTAAACG

Gene: b0931: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Salmonella typhimurium LT2

Site:
position = -47
score = 5.92414
sequence = TGTTTATTGTACTAAACG

Gene: STM1004: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -47
score = 5.92414
sequence = TGTTTATTGTACTAAACG

Gene: CKO_02134: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -118
score = 5.60203
sequence = TGTTCAATATATTAAACT

Gene: KPN_00967: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Enterobacter sp. 638

Site:
position = -47
score = 5.92414
sequence = TGTTTATTGTACTAAACG

Gene: Ent638_1450: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Erwinia amylovora ATCC 49946

Gene: EAM_1359: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Yersinia pestis KIM

Gene: y2757: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Serratia proteamaculans 568

Site:
position = -249
score = 5.28531
sequence = TGTTTAAAATAATTAACA

Gene: Spro_1732: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA2540: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Edwardsiella tarda EIB202

Gene: ETAE_1241: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Proteus mirabilis HI4320

Gene: PMI0767: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu1754: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
CRON 3.
nadB
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -24
score = 6.44916
sequence = TGTTTAGTAAATTAAACA

Gene: b2574: L-aspartate oxidase (EC 1.4.3.16)
*
Salmonella typhimurium LT2

Site:
position = -24
score = 6.44916
sequence = TGTTTAGTAAATTAAACA

Gene: STM2641: L-aspartate oxidase (EC 1.4.3.16)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -24
score = 6.44916
sequence = TGTTTAGTAAATTAAACA

Gene: CKO_00208: L-aspartate oxidase (EC 1.4.3.16)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -24
score = 6.44916
sequence = TGTTTAGTAAATTAAACA

Gene: KPN_02899: L-aspartate oxidase (EC 1.4.3.16)
*
Enterobacter sp. 638

Site:
position = -24
score = 6.44916
sequence = TGTTTAGTAAATTAAACA

Gene: Ent638_3061: L-aspartate oxidase (EC 1.4.3.16)
 
Erwinia amylovora ATCC 49946

Gene: EAM_2523: L-aspartate oxidase (EC 1.4.3.16)
 
Yersinia pestis KIM

Gene: y1289: L-aspartate oxidase (EC 1.4.3.16)
 
Serratia proteamaculans 568

Gene: Spro_3677: L-aspartate oxidase (EC 1.4.3.16)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA3285: L-aspartate oxidase (EC 1.4.3.16)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu3347: L-aspartate oxidase (EC 1.4.3.16)
L-aspartate oxidase (EC 1.4.3.16)
 
CRON 4.
nadR
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4390: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Salmonella typhimurium LT2

Gene: STM4580.S: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03396: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04845: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Enterobacter sp. 638

Gene: Ent638_0549: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Erwinia amylovora ATCC 49946

Gene: EAM_0623: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Yersinia pestis KIM
*
Serratia proteamaculans 568

Site:
position = -26
score = 6.33595
sequence = TGTTTAGCATATTAAACG

Gene: Spro_0668: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -31
score = 5.64039
sequence = TGTTTAGTAGGCTAAACA

Gene: ECA0463: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320

Gene: PMI2505: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0553: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
 
CRON 5.
niaP
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
*
Proteus mirabilis HI4320

Site:
position = -48
score = 6.4711
sequence = TGTTTAGTATACTAAACA

Gene: PMI0164: Niacin transporter, MFS family
 
Photorhabdus luminescens subsp. laumondii TTO1
Niacin transporter, MFS family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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