Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraC regulog to Pantoea ananatis LMG 20103

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Pantoea ananatis LMG 20103
Orthologous TF(s) PANA_1828
Regulated genes 3
Built upon 56 sites [see more]
Predicted regulatory interactions in Pantoea ananatis LMG 20103
Locus tag Position Score Sequence
Position: -170
Score: 4.9
Sequence: GGGCTTTTTACACATTA-(4)-CAAAAAAAGCGTGTTGA
Position: -60
Score: 6.5
Sequence: CAGTAAAATCGTCCATA-(4)-GACCTCATTTGCCCTCA
Locus tag: PANA_1091
PANA_1091 -170 4.9 GGGCTTTTTACACATTA-(4)-CAAAAAAAGCGTGTTGA
-60 6.5 CAGTAAAATCGTCCATA-(4)-GACCTCATTTGCCCTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: Low-affinity L-arabinose transport system proton symport protein
Enterobacter sp. 638 Ent638_3294 -179 4.6 TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA
-158 4.8 TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03264 -159 7.5 CAGCAATATAGTCCATA-(4)-TGGCTTATCCTGCCTGA
-73 4.9 TGGCAGGAAAAAAATGA-(4)-AATCAGTAACGACTCTA
Salmonella typhimurium LT2 STM3016 -99 6.9 TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
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