Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BetI regulog to Pantoea ananatis LMG 20103

Reference regulog properties
Source regulog: BetI - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Glycine betaine synthesis
Effector: Choline
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pantoea ananatis LMG 20103
Orthologous TF(s) PANA_2166
Regulated genes 2
Built upon 14 sites [see more]
Predicted regulatory interactions in Pantoea ananatis LMG 20103
Locus tag Position Score Sequence
Position: -212
Score: 6.4
Sequence: TTGATTGGATGTTCAATATA
Locus tag: PANA_2165
PANA_2165 -212 6.4 TTGATTGGATGTTCAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: betT
Ortholog function: choline transporter of high affinity
Escherichia coli str. K-12 substr. MG1655 b0314 -82 6.7 TTGATTGGACGTTCAATATA
Citrobacter koseri ATCC BAA-895 CKO_02581 -236 6.7 TTGATTGGACGTTCAATATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00587 -82 6.7 TTGATTGGACGTTCAATATA
Erwinia amylovora ATCC 49946 EAM_P133 -243 5.9 TTAATTGAATGCGCAATCAA
Serratia proteamaculans 568 Spro_1512 -308 7 TTGATTGAACGTTCAATAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1743 -274 7 TTGATTGAACGTTCAATAAA
Proteus mirabilis HI4320 PMI1462 -161 6.5 TTAATTGAACATTCAATCAA
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