Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlpR regulog to Erwinia pyrifoliae Ep1/96

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Erwinia pyrifoliae Ep1/96
Orthologous TF(s) EpC_34400
Regulated genes 4
Built upon 64 sites [see more]
Predicted regulatory interactions in Erwinia pyrifoliae Ep1/96
Locus tag Position Score Sequence
Position: -98
Score: 5.2
Sequence: TGCTCGTTAACGATAA
Locus tag: EpC_01350
EpC_01350 -98 5.2 TGCTCGTTAACGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator protein
Erwinia amylovora ATCC 49946 EAM_0119 -163 4.1 TACGCGAAAACGCTCA
-100 4.6 TGTTCGTTAACGATAG
Position: -98
Score: 4
Sequence: TGCGCGGAATGAAACA
Locus tag: EpC_02150
EpC_02150 -98 4 TGCGCGGAATGAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -218 3.9 TGTTTGATTTCGCGCA
-166 3.7 TGCGTCATTTTGAACA
Salmonella typhimurium LT2 STM2283 -219 3.9 TGTTTGATTTCGCGCA
Citrobacter koseri ATCC BAA-895 CKO_00537 -210 4.2 CGCGCATAATCGCTCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -217 4.3 TGTTTGATTTCGAGCA
Enterobacter sp. 638 Ent638_2804 -200 4.6 TGTTTGATTTCGAACA
Erwinia amylovora ATCC 49946 EAM_0195 -100 4.3 TGTGCGCAATGGAACA
Serratia proteamaculans 568 Spro_0199 -108 4.8 CGCTCGTTATGGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -52 4.5 CGTTCGTAATAGAACA
Edwardsiella tarda EIB202 ETAE_3116 -153 4.6 CGCTCGAAAATGAAAA
Proteus mirabilis HI4320 PMI3591 -92 4.5 CGTTCGTTAAAGAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -109 4.3 TTTTCGTTATGGAAAA
Position: -204
Score: 4.7
Sequence: TGTTCGTTTTCGAGCA
Locus tag: EpC_34420
EpC_34420 -204 4.7 TGTTCGTTTTCGAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpE
Ortholog function: thiosulfate sulfurtransferase
Escherichia coli str. K-12 substr. MG1655 b3425 -155 5.3 TGTTCGTTATCGAACA
Salmonella typhimurium LT2 STM3525 -164 5.3 TGTTCGTTATCGAACA
Citrobacter koseri ATCC BAA-895 CKO_04844 -168 5.1 TGTTCGTTATCGAGCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03791 -167 4.9 TGCTCGATATCGCTCA
Erwinia amylovora ATCC 49946 EAM_3264 -203 4.7 TGTTCGTTTTCGAGCA
Position: -50
Score: 5.3
Sequence: TGCTCGAAAACGAACA
Locus tag: EpC_34430
EpC_34430 -50 5.3 TGCTCGAAAACGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA