Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR/GalS regulog to Erwinia pyrifoliae Ep1/96

Reference regulog properties
Source regulog: GalR/GalS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Galactose utilization
Effector: Galactose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Erwinia pyrifoliae Ep1/96
Orthologous TF(s) EpC_29200
Regulated genes 3
Built upon 78 sites [see more]
Predicted regulatory interactions in Erwinia pyrifoliae Ep1/96
Locus tag Position Score Sequence
Position: -109
Score: 6.3
Sequence: GAGTGTAAACGATTCCATTT
Locus tag: EpC_24140
EpC_24140 -109 6.3 GAGTGTAAACGATTCCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galT
Ortholog function: galactose-1-phosphate uridylyltransferase
Escherichia coli str. K-12 substr. MG1655 b0758 -96 6.6 TTGTGTAAACGATTCCACTA
Salmonella typhimurium LT2 STM0775 -96 6.4 GTGTGTAAACGATTCCACTA
Citrobacter koseri ATCC BAA-895 CKO_02377 -54 6.4 AAGTGTAAACGATTCCACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00772 -252 4.9 CAGTGGAGACGGTTACACTT
-96 6.4 AAGTGTAAACGATTCCACTA
Enterobacter sp. 638 Ent638_1249 -96 6.2 CGGTGTAACCGATTCCACTA
Erwinia amylovora ATCC 49946 EAM_1197 -197 5.1 CTATGTAATCGTTTTCAACA
-108 6.4 TAGTGTAAACGATTCCATTT
Yersinia pestis KIM y3044 -95 6.4 GAGTGTAAACGATTCCATTA
Serratia proteamaculans 568 Spro_1292 -160 6.1 CTGTGTAAACGATTCCATTT
-50 5 AGGTGAAAGCGATTACACAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3171 -240 6 TAGGGTAACCGATTACACTT
-152 5 TAGTGAAACTGATTACATTG
Edwardsiella tarda EIB202 ETAE_2565 -195 5.5 TAGTGTAAGCGATACCACAA
-95 6.4 TAGTGTAAACGATTCCATTT
Proteus mirabilis HI4320 PMI1950 -259 5.3 TAATGTAATCGTTTACTTTT
-126 6.1 GCGTGTAAACGTTTACACTA
Position: -35
Score: 4.9
Sequence: AAATGTAAACGCTTACCCAG
Locus tag: EpC_29200
EpC_29200 -35 4.9 AAATGTAAACGCTTACCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: galactose operon repressor galR
Escherichia coli str. K-12 substr. MG1655 b2837 -32 5.2 GAATGTAAGCGTTTACCCAC
Salmonella typhimurium LT2 STM3011 -33 5.3 TAATGTAAGCGTTTACCCAC
Citrobacter koseri ATCC BAA-895 CKO_04211 -33 5.1 AAATGTAAGCGTTTACCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03246 -33 5.5 GTATGTAAACGCTTACCCTA
Enterobacter sp. 638 Ent638_3278 -35 5.3 GTGTGTAAACGCTTACCCCC
Erwinia amylovora ATCC 49946 EAM_2770 -35 4.9 AAATGTAAACGCTTACCCAG
Yersinia pestis KIM y3183 32 5.4 TGATGTAAGCGGTTACCCTA
Serratia proteamaculans 568 Spro_3832 -34 5.2 GAATGTAAGCGATTACCCAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3172 -240 5.3 AAGTGTAATCGGTTACCCTA
Edwardsiella tarda EIB202 ETAE_2890 -41 5.2 TGGTGTAAACGTTTACGGTT
© 2009-2020 RegPrecise