Propagation of FadR regulog to Escherichia coli O157:H7 str. EC4486
| Source regulog: | FadR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Escherichia coli O157:H7 str. EC4486 |
| Orthologous TF(s) | EcolO157_010100027768 |
| Regulated genes | 10 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -86
Score: 4.5 Sequence: AACTCATCGGATCAGTT
Locus tag: EcolO157_010100002809
|
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| EcolO157_010100002809 | -86 | 4.5 | AACTCATCGGATCAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iclR | ||||
| Ortholog function: Acetate operon transcriptional repressor, IclR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4018 | -86 | 4.5 | AACTCATCGGATCAGTT |
|
Position: -83
Score: 3.3 Sequence: GGCTGATCGGACTTGTT
Locus tag: EcolO157_010100011646
|
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| EcolO157_010100011646 | -83 | 3.3 | GGCTGATCGGACTTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabB | ||||
| Ortholog function: 3-oxoacyl-(acyl carrier protein) synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2323 | -83 | 3.3 | GGCTGATCGGACTTGTT |
| Salmonella typhimurium LT2 | STM2378 | -84 | 3.3 | GGCTGATCGGACTTGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00462 | -83 | 3.3 | GGCTGATCGGACTTGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02713 | -83 | 3.8 | GTCTGATCGGACTTGTT |
| Enterobacter sp. 638 | Ent638_2871 | -82 | 3.3 | GGCTGATCGGACTTGTT |
| Erwinia amylovora ATCC 49946 | EAM_2336 | -82 | 3.9 | AGCTGATCGGACTTGTT |
| Yersinia pestis KIM | y1591 | -85 | 3.7 | CGCTGATCGGACTTGTT |
| Serratia proteamaculans 568 | Spro_3368 | -84 | 3.7 | CGCTGATCGGACTTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3063 | -86 | 3.3 | GGCTGATCGGACTTGTT |
| Edwardsiella tarda EIB202 | ETAE_2421 | -126 | 3.7 | ATCTGGTTTTACCAGCG |
| Proteus mirabilis HI4320 | PMI1795 | -89 | 3.3 | TCCTGATCGGACTTGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3184 | -96 | 3.3 | TCCTGATCGGACTTGTT |
|
Position: -43
Score: 5.1 Sequence: ATCAGGTCAGACCACTT
Locus tag: EcolO157_010100011746
|
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| EcolO157_010100011746 | -43 | 5.1 | ATCAGGTCAGACCACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadI | ||||
| Ortholog function: FadI component of anaerobic fatty acid oxidation complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2342 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Salmonella typhimurium LT2 | STM2389 | -42 | 4.8 | ATCAGGTCAGACCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00448 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02724 | -44 | 5.1 | ATCAGGTCAGACCACTT |
| Enterobacter sp. 638 | Ent638_2882 | -48 | 5.1 | ATCAGGTCAGACCACTT |
| Yersinia pestis KIM | y1579 | -66 | 5 | ATCAGGTCAGACCTGTT |
| Serratia proteamaculans 568 | Spro_3379 | -56 | 5 | ATCAGGTCAGACCTCTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3079 | -53 | 5 | ATCAGGTCTGACCTGTT |
| Proteus mirabilis HI4320 | PMI1808 | -50 | 5 | ATCAGGTCAGACCTCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3201 | -81 | 4.7 | ATCAGGTCAGACCTGTC |
|
Position: -126
Score: 4.2 Sequence: AGCTGGTCCGACCTATA
Position: -102
Score: 4.4 Sequence: CACTGGTCTGATTTCTA
Locus tag: EcolO157_010100011761
|
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| EcolO157_010100011761 | -126 | 4.2 | AGCTGGTCCGACCTATA | |
| -102 | 4.4 | CACTGGTCTGATTTCTA | ||
| Supported by regulated orthologs from reference regulons | ||||