Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GlpR regulog to Yersinia pestis biovar Antiqua str. UG05-0454

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis biovar Antiqua str. UG05-0454
Orthologous TF(s) YpUG050454_0539
Regulated genes 2
Built upon 64 sites [see more]
Predicted regulatory interactions in Yersinia pestis biovar Antiqua str. UG05-0454
Locus tag Position Score Sequence
Position: -93
Score: 5
Sequence: CGCTCGTTAACGATAA
Locus tag: YpUG050454_0415
YpUG050454_0415 -93 5 CGCTCGTTAACGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator protein
Yersinia pestis KIM y0046 -155 4.1 TACGCGAAAACGCTCA
-93 5 CGCTCGTTAACGATAA
Serratia proteamaculans 568 Spro_4797 -137 5.1 TGTTCGTTAACGATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4266 -107 4.7 CGCTCATTAACGATAA
Edwardsiella tarda EIB202 ETAE_3441 -93 5 CGCTCGTTAACGATAA
Position: -52
Score: 5
Sequence: TGAGCGAAAACGAACA
Locus tag: YpUG050454_3836
YpUG050454_3836 -52 5 TGAGCGAAAACGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA
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