Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NsrR regulog to Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188
Orthologous TF(s) Sente_010100026787
Regulated genes 9
Built upon 73 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188
Locus tag Position Score Sequence
Position: -185
Score: 4.3
Sequence: GTTGTATACAAAATATCTT
Locus tag: Sente_010100005984
Sente_010100005984 -185 4.3 GTTGTATACAAAATATCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhO
Ortholog function: putative exported protein
Escherichia coli str. K-12 substr. MG1655 b1655 -217 4.8 GTTGCATTTCAAATATTCG
Salmonella typhimurium LT2 STM1432 -185 4.3 GTTGTATACAAAATATCTT
Enterobacter sp. 638 Ent638_1792 -223 3.9 GTTGCATTCGCAATATAGT
Position: -208
Score: 3.7
Sequence: GATGTAAAAAAATAGCAAT
Position: -135
Score: 3.7
Sequence: AAGATATTTTGTATACAAC
Locus tag: Sente_010100005989
Sente_010100005989 -208 3.7 GATGTAAAAAAATAGCAAT
-135 3.7 AAGATATTTTGTATACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: grxD
Ortholog function: Probable monothiol glutaredoxin ydhD
Escherichia coli str. K-12 substr. MG1655 b1654 -135 4.4 CGAATATTTGAAATGCAAC
Salmonella typhimurium LT2 STM1433 -208 3.7 GATGTAAAAAAATAGCAAT
-135 3.7 AAGATATTTTGTATACAAC
Citrobacter koseri ATCC BAA-895 CKO_01665 -134 4.3 GAGATATTTAGAATGCAAC
Position: -35
Score: 5.4
Sequence: AATGCATTTCAAATATACT
Locus tag: Sente_010100007089
Sente_010100007089 -35 5.4 AATGCATTTCAAATATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tehA
Ortholog function: Tellurite resistance protein TehA
Escherichia coli str. K-12 substr. MG1655 b1429 -47 5.4 AATGCATTTCAAATATACT
Salmonella typhimurium LT2 STM1609 -35 5.4 AATGCATTTCAAATATACT
Citrobacter koseri ATCC BAA-895 CKO_01466 -35 5.6 AATGCATTTAAAATATACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01941 -47 5 GGTTCCTTTAAAATGCAAC
Enterobacter sp. 638 Ent638_1974 -35 5.2 CTAGCATTTCAAATATAAT
Position: -35
Score: 5.7
Sequence: CATGTATATTAAATATAAC
Locus tag: Sente_010100013706
Sente_010100013706 -35 5.7 CATGTATATTAAATATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Salmonella typhimurium LT2 STM0937 -35 5.7 CATGTATATTAAATATAAC
Position: -47
Score: 6.4
Sequence: GATGCATTTAAAATACAAC
Locus tag: Sente_010100017477
Sente_010100017477 -47 6.4 GATGCATTTAAAATACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN or NorA
Escherichia coli str. K-12 substr. MG1655 b4209 -47 6.4 GATGCATTTAAAATACATC
Salmonella typhimurium LT2 STM4399 -47 6.4 GATGCATTTAAAATACAAC
Citrobacter koseri ATCC BAA-895 CKO_03623 -47 6.2 GATGTATTTAAAATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04602 -47 6.4 GATGCATTTAAAATACATC
Enterobacter sp. 638 Ent638_0379 -48 5.8 GATGCATTTAATATGCACC
Yersinia pestis KIM y0652 -77 5.1 CATGCATTTATTATGCATG
-53 4.8 GGTGTATAATAAATACATG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3606 -50 6 GATGCATTTAAAATGCAAT
Edwardsiella tarda EIB202 ETAE_0372 -47 5.7 ATTGCATTTAAAATACACC
Position: -248
Score: 3.8
Sequence: TAGTCATTTTCTATACATC
Locus tag: Sente_010100025227
Sente_010100025227 -248 3.8 TAGTCATTTTCTATACATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -248 4.1 TAGTCATTTTCAATACAAC
Salmonella typhimurium LT2 STM1369 -248 3.8 TAGTCATTTTCTATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -116 4 TATGCTTATAAAAAGCACT
Enterobacter sp. 638 Ent638_1760 -249 3.8 TAGGCATTATCTATACATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -191 3.9 AATAAATTAAAGATATACC
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