Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TnrA regulog to Brevibacillus brevis NBRC 100599

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Brevibacillus brevis NBRC 100599
Orthologous TF(s) No orthologous TFs found
Regulated genes 13
Built upon 304 sites [see more]
Predicted regulatory interactions in Brevibacillus brevis NBRC 100599
Locus tag Position Score Sequence
Position: -64
Score: 5.6
Sequence: TGTCATATAATCTGACA
Position: -35
Score: 4.9
Sequence: CGTCAGGTTATCTGACA
Locus tag: BBR47_09050
BBR47_09050 -64 5.6 TGTCATATAATCTGACA
-35 4.9 CGTCAGGTTATCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Anoxybacillus flavithermus WK1 Aflv_1332 -112 4.6 TGTCATGAAAAATAACA
-49 4.8 TGTAATATATTATAACC
-27 5 TGTTATAAAAAATGACA
Geobacillus kaustophilus HTA426 GK1452 -124 4.4 TGTTAAGAAATTTAACA
-48 5.4 TGTTATATATTATGACA
Bacillus halodurans C-125 BH3834 -138 4 TGTCAGATATAGGCACA
-113 4.9 TGTCTGATTATCTGACA
-41 4.3 TATTAGAAAAACTTACA
Bacillus clausii KSM-K16 ABC3928 -84 5.2 TGTTAGATATCCTGACA
Paenibacillus sp. JDR-2 Pjdr2_2141 -159 4.2 TGTGAAAAAACTTAACA
-34 4.5 TGTTAGTAAACATCACA
Position: -106
Score: 3.8
Sequence: TATTAGAAAATTTTAAA
Locus tag: BBR47_12160
BBR47_12160 -106 3.8 TATTAGAAAATTTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnQ
Ortholog function: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Bacillus subtilis subsp. subtilis str. 168 BSU27430 -28 4 GGTCAAATTTTCTGATA
Bacillus amyloliquefaciens FZB42 RBAM_024530 -123 3.5 TATCAGAAATTACGAAA
Bacillus pumilus SAFR-032 BPUM_2382 -93 3.8 TGTTAAAAATGAATACA
Bacillus clausii KSM-K16 ABC0770 -8 3.4 GGACAGCAATGATCACA
Paenibacillus sp. JDR-2 Pjdr2_2874 -63 4.7 TGTTATCTAACCTAACA
Position: -84
Score: 5.5
Sequence: TGTAATATTATCTAACA
Locus tag: BBR47_33540
BBR47_33540 -84 5.5 TGTAATATTATCTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU17450 -82 4.3 TGTTAAGAATCCTTACA
-59 5 TGACACATAATATAACA
Bacillus amyloliquefaciens FZB42 RBAM_017250 -82 4.3 TGTTAAGATTCCTTACA
-59 4.9 TGACACAAAATATAACA
Bacillus pumilus SAFR-032 BPUM_1636 -82 4.4 TGTTAATATTCCTAACA
-59 5.1 TGACATATAATATAACA
-54 4.2 TATAATATAACATGACA
Bacillus licheniformis DSM 13 BLi01992 -81 4.2 TGTAAAGAATCCTTACA
-58 5 TGACACATTATATAACA
Anoxybacillus flavithermus WK1 Aflv_1508 -82 4.7 TGTGATAAAATGTAACG
-59 4.3 TGACATATAAGTTAACA
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